FFCP PHASE1:Mm9::chr10:74872764..74872799,+: Difference between revisions
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|id=chr10:74872764..74872799,+
|short_description=p4@Upb1
|description=CAGE_peak_4_at_Upb1_5end
|association_with_transcript=0bp_to_ENSMUST00000132629_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=103149 | |EntrezGene=103149 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=11 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000132629_5end | |||
|cluster_id=chr10:74872764..74872799,+ | |||
|description=CAGE_peak_4_at_Upb1_5end | |||
|id=chr10:74872764..74872799,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.50e-08!5;CL:0000417!2.50e-08!5;CL:0000668!2.50e-08!5;CL:0000412!2.50e-08!5;CL:0000182!2.50e-08!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.84e-09,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!2.45e-20!49;UBERON:0005173!2.45e-20!49;UBERON:0002417!2.45e-20!49;UBERON:0000916!2.45e-20!49;UBERON:0002107!3.80e-19!22;UBERON:0007499!3.80e-19!22;UBERON:0006925!3.80e-19!22;UBERON:0009497!3.80e-19!22;UBERON:0000015!3.80e-19!22;UBERON:0002423!3.80e-19!22;UBERON:0006235!3.80e-19!22;UBERON:0008835!3.80e-19!22;UBERON:0003894!3.80e-19!22;UBERON:0004161!3.80e-19!22;UBERON:0008836!3.80e-19!22;UBERON:0009854!3.58e-18!23;UBERON:0009856!3.58e-18!23;UBERON:0002365!1.86e-16!25;UBERON:0002330!1.86e-16!25;UBERON:0009569!9.92e-14!66;UBERON:0002113!4.22e-11!14;UBERON:0003918!4.22e-11!14;UBERON:0005095!4.22e-11!14;UBERON:0007687!4.22e-11!14;UBERON:0005177!1.34e-10!85;UBERON:0006554!1.59e-09!16;UBERON:0001008!7.08e-09!17;UBERON:0002100!1.76e-08!98;UBERON:0005057!1.72e-07!51;UBERON:0003914!2.75e-07!47;UBERON:0005256!2.75e-07!47;UBERON:0000489!6.62e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,2.29e-22,49;UBERON:0005173,2.29e-22,49;UBERON:0002417,2.29e-22,49;UBERON:0000916,2.29e-22,49;UBERON:0002113,5.58e-21,14;UBERON:0003918,5.58e-21,14;UBERON:0011143,5.58e-21,14;UBERON:0005095,5.58e-21,14;UBERON:0007687,5.58e-21,14;UBERON:0003104,1.67e-17,61;UBERON:0009142,1.67e-17,61;UBERON:0006554,4.17e-16,18;UBERON:0009569,5.39e-16,66;UBERON:0001008,3.30e-15,19;UBERON:0000489,1.15e-13,21;UBERON:0005177,5.81e-13,79;UBERON:0002107,1.32e-12,22;UBERON:0007499,1.32e-12,22;UBERON:0006925,1.32e-12,22;UBERON:0009497,1.32e-12,22;UBERON:0000015,1.32e-12,22;UBERON:0002423,1.32e-12,22;UBERON:0006235,1.32e-12,22;UBERON:0008835,1.32e-12,22;UBERON:0003894,1.32e-12,22;UBERON:0004161,1.32e-12,22;UBERON:0008836,1.32e-12,22;UBERON:0009854,5.12e-12,23;UBERON:0009856,5.12e-12,23;UBERON:0002100,4.48e-11,90;UBERON:0002365,5.60e-11,25;UBERON:0002330,5.60e-11,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,0.679971333707751,2.15881276655127,1.29955283489534,2.68816132258401,2.52799956237153,0,0,0,0,0,0,0,0,0,0,3.19714863213368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,1.22190796707189,2.32742984601151,4.62896411276103,3.60448261608267,7.38050739898011,8.00693511991011,10.6121560972748,4.74324203339438,0,0,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0,1.43768206527355,0,0.624075346229121,1.51547326768267,0.717589654087649,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,0.679971333707751,2.15881276655127,1.29955283489534,2.68816132258401,2.52799956237153,0,0,0,0,0,0,0,0,0,0,3.19714863213368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,1.22190796707189,2.32742984601151,4.62896411276103,3.60448261608267,7.38050739898011,8.00693511991011,10.6121560972748,4.74324203339438,0,0,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0,1.43768206527355,0,0.624075346229121,1.51547326768267,0.717589654087649,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p4@Upb1 | |||
}} | }} |
Latest revision as of 06:57, 26 September 2015
Short description: | p4@Upb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Upb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 0bp_to_ENSMUST00000132629_5end |
EntrezGene: | Upb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.84e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
abdomen element | 2.29e-22 | 49 |
abdominal segment element | 2.29e-22 | 49 |
abdominal segment of trunk | 2.29e-22 | 49 |
abdomen | 2.29e-22 | 49 |
kidney | 5.58e-21 | 14 |
kidney mesenchyme | 5.58e-21 | 14 |
upper urinary tract | 5.58e-21 | 14 |
kidney rudiment | 5.58e-21 | 14 |
kidney field | 5.58e-21 | 14 |
mesenchyme | 1.67e-17 | 61 |
entire embryonic mesenchyme | 1.67e-17 | 61 |
urinary system structure | 4.17e-16 | 18 |
subdivision of trunk | 5.39e-16 | 66 |
renal system | 3.30e-15 | 19 |
cavitated compound organ | 1.15e-13 | 21 |
trunk region element | 5.81e-13 | 79 |
liver | 1.32e-12 | 22 |
epithelial sac | 1.32e-12 | 22 |
digestive gland | 1.32e-12 | 22 |
epithelium of foregut-midgut junction | 1.32e-12 | 22 |
anatomical boundary | 1.32e-12 | 22 |
hepatobiliary system | 1.32e-12 | 22 |
foregut-midgut junction | 1.32e-12 | 22 |
hepatic diverticulum | 1.32e-12 | 22 |
liver primordium | 1.32e-12 | 22 |
septum transversum | 1.32e-12 | 22 |
liver bud | 1.32e-12 | 22 |
digestive tract diverticulum | 5.12e-12 | 23 |
sac | 5.12e-12 | 23 |
trunk | 4.48e-11 | 90 |
exocrine gland | 5.60e-11 | 25 |
exocrine system | 5.60e-11 | 25 |