FFCP PHASE1:Mm9::chr10:75403348..75403368,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:75403348..75403368,-
|short_description=p2@ENSMUST00000059658,p2@uc007fts.1
|description=CAGE_peak_2_at_ENSMUST00000059658_5end,CAGE_peak_2_at_uc007fts.1_5...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=204 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UMK1 | |UniProt=Q3UMK1 | ||
|association_with_transcript=48bp_to_ENSMUST00000059658,uc007fts.1_5end | |||
|cluster_id=chr10:75403348..75403368,- | |||
|description=CAGE_peak_2_at_ENSMUST00000059658_5end,CAGE_peak_2_at_uc007fts.1_5end | |||
|id=chr10:75403348..75403368,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000878,1.54e-11,2;CL:0000129,1.54e-11,2;CL:0002453,3.68e-10,8;CL:0000333,3.69e-08,10;CL:0000095,3.69e-08,10;CL:0000243,3.69e-08,10;CL:0000123,3.69e-08,10;CL:0000125,3.69e-08,10;CL:0000030,3.69e-08,10;CL:0000339,3.69e-08,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.60e-08!73;UBERON:0005743!1.60e-08!73;UBERON:0002048!2.50e-08!14;UBERON:0000117!2.50e-08!14;UBERON:0000171!2.50e-08!14;UBERON:0000170!2.50e-08!14;UBERON:0005597!2.50e-08!14;UBERON:0000118!2.50e-08!14;UBERON:0000073!4.74e-08!75;UBERON:0001016!4.74e-08!75;UBERON:0001049!1.71e-07!52;UBERON:0005068!1.71e-07!52;UBERON:0006241!1.71e-07!52;UBERON:0007135!1.71e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,5.34e-17,14;UBERON:0000117,5.34e-17,14;UBERON:0000171,5.34e-17,14;UBERON:0000170,5.34e-17,14;UBERON:0005597,5.34e-17,14;UBERON:0000118,5.34e-17,14;UBERON:0005153,7.01e-14,17;UBERON:0005178,7.01e-14,17;UBERON:0005181,7.01e-14,17;UBERON:0002224,7.01e-14,17;UBERON:0000915,7.01e-14,17;UBERON:0008947,7.01e-14,17;UBERON:0003258,7.01e-14,17;UBERON:0005157,1.08e-11,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31811709640683,0.388859798148567,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,5.69240209984969,27.6637179831519,0,0,0,0,0.662605622854841,0,0,0,0,0.383062014255563,0.307213066512487,0.131886287730194,0,0,0,0.56276261003168,0.763991238884051,0.589257170947335,0.711858403995515,0.931997229126503,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,1.49790639404823,1.37250180845588,0.628271760564322,0.173824320192276,0.511430914660661,1.87009240103604,0.973447578406546,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,1.47202963994889,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11642284300551,0,0,0,0,10.5309318394965,0,0,0,0,0.670025029767263,0.952174563544055,0.975668239288994,1.89162172927429,4.4292937929755,1.59454768657487,3.4411296090305,4.31712454664739,5.64131328467895,0,0,0,0,0.80275294993896,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,5.96148357874728,0,0,9.73323725537959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0.608929898229199,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0,0,0,0,0.375364950902364,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.760437899670719,0.377252682772152,0.842773567228942,0.448176066834085,0.459483751644906,0.952587382566147,0.231768651889711,0,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0,0.188218760830661,0.0846146078916765,0.182927972872773,0.526139422875686,0.271608227691724,0,0.118635018124174,0.492522411877817,0,0.309873682371932,0.192906610981141,0.999242311751784,0.701794825336225,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31811709640683,0.388859798148567,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,5.69240209984969,27.6637179831519,0,0,0,0,0.662605622854841,0,0,0,0,0.383062014255563,0.307213066512487,0.131886287730194,0,0,0,0.56276261003168,0.763991238884051,0.589257170947335,0.711858403995515,0.931997229126503,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,1.49790639404823,1.37250180845588,0.628271760564322,0.173824320192276,0.511430914660661,1.87009240103604,0.973447578406546,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,1.47202963994889,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11642284300551,0,0,0,0,10.5309318394965,0,0,0,0,0.670025029767263,0.952174563544055,0.975668239288994,1.89162172927429,4.4292937929755,1.59454768657487,3.4411296090305,4.31712454664739,5.64131328467895,0,0,0,0,0.80275294993896,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,5.96148357874728,0,0,9.73323725537959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0.608929898229199,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0,0,0,0,0.375364950902364,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.760437899670719,0.377252682772152,0.842773567228942,0.448176066834085,0.459483751644906,0.952587382566147,0.231768651889711,0,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0.476872379894642,0,0.188218760830661,0.0846146078916765,0.182927972872773,0.526139422875686,0.271608227691724,0,0.118635018124174,0.492522411877817,0,0.309873682371932,0.192906610981141,0.999242311751784,0.701794825336225,0.429742108096597,0,0,0 | ||
|short_description=p2@ENSMUST00000059658,p2@uc007fts.1 | |||
}} | }} |
Latest revision as of 07:23, 26 September 2015
Short description: | p2@ENSMUST00000059658, p2@uc007fts.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000059658_5end, CAGE_peak_2_at_uc007fts.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:204 |
Association with transcript: | 48bp_to_ENSMUST00000059658, uc007fts.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system macrophage | 1.54e-11 | 2 |
microglial cell | 1.54e-11 | 2 |
oligodendrocyte precursor cell | 3.68e-10 | 8 |
migratory neural crest cell | 3.69e-08 | 10 |
neuron associated cell | 3.69e-08 | 10 |
glial cell (sensu Vertebrata) | 3.69e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 3.69e-08 | 10 |
glial cell | 3.69e-08 | 10 |
glioblast | 3.69e-08 | 10 |
glioblast (sensu Vertebrata) | 3.69e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
lung | 5.34e-17 | 14 |
respiratory tube | 5.34e-17 | 14 |
respiration organ | 5.34e-17 | 14 |
pair of lungs | 5.34e-17 | 14 |
lung primordium | 5.34e-17 | 14 |
lung bud | 5.34e-17 | 14 |
epithelial bud | 7.01e-14 | 17 |
thoracic cavity element | 7.01e-14 | 17 |
thoracic segment organ | 7.01e-14 | 17 |
thoracic cavity | 7.01e-14 | 17 |
thoracic segment of trunk | 7.01e-14 | 17 |
respiratory primordium | 7.01e-14 | 17 |
endoderm of foregut | 7.01e-14 | 17 |
epithelial fold | 1.08e-11 | 20 |