FFCP PHASE1:Hg19::chr8:95487331..95487359,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25788 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17228 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y620,F6WBS8,O95073 | |||
|association_with_transcript=0bp_to_ENST00000336148,NM_001205262,NM_012415_5end | |||
|cluster_id=chr8:95487331..95487359,- | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_3_at_RAD54B_5end | |||
|id=chr8:95487331..95487359,- | |||
|ontology_enrichment_celltype=CL:0000066!4.61e-08!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.69e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.45e-51!235;DOID:14566!1.65e-49!239;DOID:0050687!1.56e-30!143;DOID:305!1.50e-25!106;DOID:0050686!2.73e-25!137;DOID:2531!1.54e-15!51;DOID:0060083!1.54e-15!51;DOID:1240!1.13e-12!39;DOID:8692!1.08e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.25e-11;31!DOID:1240;6.03e-11;39!DOID:2531;5.14e-10;51!DOID:0060083;5.14e-10;51!DOID:305;1.79e-08;106!DOID:0050687;3.82e-08;143!DOID:14566;5.84e-07;239!DOID:0050686;9.85e-07;137 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.12e-53,235;DOID:14566,9.41e-52,239;DOID:0050687,6.42e-32,143;DOID:305,2.01e-26,106;DOID:0050686,4.45e-26,137;DOID:2531,3.17e-16,51;DOID:0060083,3.17e-16,51;DOID:1240,2.13e-13,39;DOID:8692,2.51e-11,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,1.2846031433459,1.26858963686374,0,0.446961094427288,1.74467704820074,0,0,0,1.96587149201207,1.39560233594486,1.96597234917155,1.31883489114227,0.247532705920093,0.331397375727916,2.01697543935533,0,1.46062018077475,0.487932798790507,1.96993692922861,1.02000345622126,0.313454721478088,4.86601178122796,5.33810257784248,6.65375989852455,10.927117021957,11.0014789862927,9.76013688289623,0,0,0,0.919421224478927,0.30120591877825,0,4.49309763365749,5.40243083452202,1.46800219667424,0,0.200544447470142,0,0.895661896959697,1.29557466407592,1.28787783817093,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0.211255286311942,0,0.419317291016752,0.112328631146495,0.150176892841506,0,0.285012743741249,0.19891667719909,0.365328307529268,0,1.09227722252426,1.77901850772711,1.70692089026603,2.40237592221607,1.14950487990897,0,0,0.569212969109448,0.587237189370939,2.6759125968766,0,0,4.47752944117631,1.37696839079683,0.786021525498329,1.23360899399706,2.00623794468814,0.32592226663359,2.36723902867367,1.94826728407911,1.33692548262208,0.589211814949674,0.886135578334485,0.812411591295047,1.40900451698243,1.8208308658383,2.30213066445147,2.76350017785848,2.60822777161547,2.96573126324121,2.67540828089713,3.1360657141493,3.39928028092699,0.766440987203842,1.37450978193052,1.77113784413652,0.95569624297229,0.651083453856419,0.950452044448374,3.16207750063323,3.96758494578697,0,1.4206635122641,1.64225599384209,1.81446068902259,0.267440195783507,1.01377082717959,0,0.670700859703636,0.895037932904712,5.06014813338393,0,0.144846518960824,3.9764297352555,0,4.72674085820339,2.88248216701333,2.81071314218003,1.83370705696798,0.728590576585084,1.11235332835329,0,0.870648686496336,0.531831842075461,0.715471872916026,0.571994910780128,1.11437250398869,1.98762407366705,0.860234595106124,1.04142150482278,1.13061588384802,0.419499436209906,1.6507082516404,0.417989933073621,0.775250277507987,0.71153252537342,0.66944122552934,0.402829317109147,2.28081631715554,0.976248230192678,2.20597848207521,0,5.00078478390847,2.69435247151404,4.39184773884957,1.53316637465883,0,1.46561395144326,0,0,0.436094052142534,0.496971951695318,2.40597972162702,1.45650098894541,2.0078563452417,2.83734705758686,2.80338800071154,0,0.74000264525148,2.8008993185979,2.96363478553314,2.61539044981534,0.454072282934794,0.576175924479999,1.17160715916898,0,0,0.298897361103602,8.10298040641978,6.79866366346152,5.75848307479219,0.61246251376468,4.05353247128834,0.723280468230358,1.18800285728205,0.247266929278557,0.910161361938026,0,5.21841953257605,6.25592599359821,3.3247693858102,3.07284334616587,0.30648779579902,0.600952235626387,2.49550802952046,5.56107870635472,0.640672166455702,1.48352330811693,6.00182192168805,2.98852334791473,3.34932702059318,1.11670113798954,7.25738228637445,3.02054715999716,5.04867548488229,0.920498986422993,0.969876340912871,2.84007674013291,3.42557133973977,1.18692414617341,1.35282597214308,2.18196896472668,3.44165514466805,8.53815942907168,11.2650303073262,8.01738205799677,6.42698541095297,4.03713361401005,12.774207567654,0,0.643240938192885,2.76269842704961,0,1.44375896333917,6.15195360207188,8.76640388406129,8.19437501603839,5.5146986366197,5.66486554640256,9.49082476444386,6.20224017536756,6.67152981426177,6.92544882503503,1.4763109092493,1.40241773803446,0.8231480226628,0,0,0,0,13.2438929824395,3.32068784066407,1.54411029268673,1.20725313949488,0,4.32274581370013,3.51836091602412,0.977424915930974,0,4.3299402607582,2.20267769452646,0.821860859650752,0.866198686566443,0.462985512576611,1.14152491340759,2.37061319387782,2.57545848628462,0.738651018262192,1.40402559083543,1.78357394746474,1.87467667973554,1.6798212819886,2.55195175036296,3.94057499892532,3.77824120068151,1.15014803749563,0.492663237895943,0.528290604079356,0.414656231081544,1.00883967391873,1.00993946741104,3.11139682031628,2.29193055334967,0,0,4.31875469353959,2.70308752059526,2.00078502841405,2.35475277125258,0,5.867062865676,0.387815147273333,0,4.22651376278,0.26593811658487,0,1.28603687131071,1.41849132023278,1.3321108950805,0.857867961948885,0,2.46972101034231,2.28015329005615,0.355391948742546,3.95975936466715,0.301439377059586,0.871533458600294,0.599837947092342,1.2162378064119,0.502257091432126,0,0.718874566474748,1.14861935834114,0,1.59259437334337,1.43833425785268,3.76028022803781,1.90544744788996,0.591092280605782,0.646882724578552,1.28343036279748,4.06551398755941,3.90419561572865,3.09315525111078,2.34522771468088,0.637938751653163,0,0,0,0,0.500170521059677,0.813795071099207,0.831883446123229,0.892144943985809,0.157702415033935,1.05427273493442,0,0,1.03473071292505,1.32845119707087,1.47495334833363,1.65078867489357,0.391602314925481,0,1.03384013061444,1.07857100409308,1.06727557803444,1.5156378572313,0,0.907170879989041,0.744323423456331,1.2276957863045,0.841980283299221,0.512556597022804,0,0.965123526861645,0,2.15893571323718,2.48586415438378,3.44934055257998,0.519254429183621,3.2538905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| |||
|short_description=p3@RAD54B | |||
}} |
Latest revision as of 13:00, 19 September 2015
Short description: | p3@RAD54B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAD54B_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000336148, NM_001205262, NM_012415_5end |
EntrezGene: | RAD54B |
HGNC: | 17228 |
UniProt: | Q9Y620F6WBS8O95073 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.69e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.12e-53 | 235 |
disease of cellular proliferation | 9.41e-52 | 239 |
cell type cancer | 6.42e-32 | 143 |
carcinoma | 2.01e-26 | 106 |
organ system cancer | 4.45e-26 | 137 |
hematologic cancer | 3.17e-16 | 51 |
immune system cancer | 3.17e-16 | 51 |
leukemia | 2.13e-13 | 39 |
myeloid leukemia | 2.51e-11 | 31 |