FFCP PHASE1:Mm9::chr6:115542511..115542521,-: Difference between revisions
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{{FFCP|EntrezGene=70291|HGNC=|MCL_coexpression_id=12|UniProt=D3YX48|association_with_transcript=45bp_to_ENSMUST00000088962_5end|description=CAGE_peak_4_at_2510049J12Rik_5end|id=chr6:115542511..115542521,-|ontology_enrichment_celltype=CL:0000066!8.46e-11!25;CL:0002563!2.32e-08!9;CL:0002251!2.32e-08!9;CL:0000075!1.25e-07!7;CL:0002076!1.79e-07!15|ontology_enrichment_celltype_v019_2=CL:0000075,4.20e-13,7;CL:0000066,2.52e-12,25;CL:0000239,3.19e-11,6;CL:0000677,3.19e-11,6;CL:0000584,3.19e-11,6;CL:0002563,1.90e-09,9;CL:0002251,1.90e-09,9;CL:0002076,1.95e-08,15;CL:0000682,2.56e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!4.96e-21!59;UBERON:0000160!1.00e-19!43;UBERON:0000344!1.98e-14!15;UBERON:0001007!1.04e-12!128;UBERON:0001555!1.04e-12!128;UBERON:0007026!1.04e-12!128;UBERON:0001242!1.78e-12!13;UBERON:0000060!1.78e-12!13;UBERON:0001262!1.78e-12!13;UBERON:0004786!1.78e-12!13;UBERON:0004119!3.32e-12!130;UBERON:0000925!3.32e-12!130;UBERON:0006595!3.32e-12!130;UBERON:0004921!1.83e-11!126;UBERON:0004185!1.83e-11!126;UBERON:0000485!2.37e-10!11;UBERON:0003350!2.32e-08!9;UBERON:0004808!2.32e-08!9;UBERON:0001277!2.32e-08!9;UBERON:0004923!7.99e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.06e-38,31;UBERON:0005409,4.13e-36,47;UBERON:0000344,2.32e-20,15;UBERON:0001242,9.04e-17,13;UBERON:0001262,9.04e-17,13;UBERON:0004786,9.04e-17,13;UBERON:0001007,1.06e-15,116;UBERON:0001555,1.06e-15,116;UBERON:0007026,1.06e-15,116;UBERON:0004119,2.84e-15,118;UBERON:0000925,2.84e-15,118;UBERON:0006595,2.84e-15,118;UBERON:0004921,1.03e-13,114;UBERON:0000485,5.88e-13,11;UBERON:0004923,1.86e-11,24;UBERON:0003350,1.90e-09,9;UBERON:0004808,1.90e-09,9;UBERON:0001277,1.90e-09,9;UBERON:0002108,6.87e-09,4;UBERON:0000331,1.94e-07,3;UBERON:0002116,1.94e-07,3;UBERON:0001204,1.94e-07,3;UBERON:0001168,1.94e-07,3|phase1_expression=8.96833543786846,5.23463111459042,5.91499011206397,2.11724947914781,2.50447864973174,4.70061961353291,5.37309073369709,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,7.67963629408352,7.57050627521661,9.18771142584032,10.3382879078178,7.97243560937789,11.4014051673824,8.31699428207772,17.5167103417691,0,0,0,1.73310971850765,0.997407872150954,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0.896053774194671,0.140444420131752,0,0,0,8.45060518660083,0,0,0,0.649473123033642,2.53359865475099,2.02209778005913,1.37020655662872,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,5.59175283654366,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,16.1905203662061,1.05780226665418,0,0,1.28867461322093,1.81515172161008,2.66853652613844,2.47293313946327,2.37264530772256,3.45867804920423,4.52403375840485,4.37704238490532,2.33956904542944,6.29173586057955,4.53889904736858,3.78368419183298,0.758671603812327,0.228497025219458,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.189709611372772,0.295220295959204,0,0.246794327843601,0,0,0,0.224862112384854,0,0.482354319504834,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0.538192240565737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.377210159511796,0.590603785761546,1.53717573971964,1.80899805217755,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0,0.535106452806212,0,0.304464949114599,0,0,0,0.98931751764888,0,0.180938774784468,1.07435109602823,0.656563598980245,2.91480836629851,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0.203319467126849,0.756037385752609,0.418176592028937,1.9652630737156,1.61837215661785,1.32245529160537,3.92633912976044,4.40690909192096,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.360586348559907,0,0,0,0.201652370273681,0.0974578807397524,0.288635524920988,0.116876902181569,0.226730383615211,0,0,0,0,0.93841237725591,3.84618410961257,3.00115730710692,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0,0.222246727801615,0,0.320919209591815,0,0,0.377252682772152,0.187283014939765,0,0,0,0,0.38581844092741,0,0,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.169229215783353,0.548783918618318,0.263069711437843,0,0.561142271657738,0.237270036248348,0.197008964751127,0,0.309873682371932,0,0.249810577937946,0.233931608445408,0.859484216193193,0,0,0|short_description=p4@2510049J12Rik}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70291 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=D3YX48 | |||
|association_with_transcript=45bp_to_ENSMUST00000088962_5end | |||
|cluster_id=chr6:115542511..115542521,- | |||
|description=CAGE_peak_4_at_2510049J12Rik_5end | |||
|id=chr6:115542511..115542521,- | |||
|ontology_enrichment_celltype=CL:0000066!8.46e-11!25;CL:0002563!2.32e-08!9;CL:0002251!2.32e-08!9;CL:0000075!1.25e-07!7;CL:0002076!1.79e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000075,4.20e-13,7;CL:0000066,2.52e-12,25;CL:0000239,3.19e-11,6;CL:0000677,3.19e-11,6;CL:0000584,3.19e-11,6;CL:0002563,1.90e-09,9;CL:0002251,1.90e-09,9;CL:0002076,1.95e-08,15;CL:0000682,2.56e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.96e-21!59;UBERON:0000160!1.00e-19!43;UBERON:0000344!1.98e-14!15;UBERON:0001007!1.04e-12!128;UBERON:0001555!1.04e-12!128;UBERON:0007026!1.04e-12!128;UBERON:0001242!1.78e-12!13;UBERON:0000060!1.78e-12!13;UBERON:0001262!1.78e-12!13;UBERON:0004786!1.78e-12!13;UBERON:0004119!3.32e-12!130;UBERON:0000925!3.32e-12!130;UBERON:0006595!3.32e-12!130;UBERON:0004921!1.83e-11!126;UBERON:0004185!1.83e-11!126;UBERON:0000485!2.37e-10!11;UBERON:0003350!2.32e-08!9;UBERON:0004808!2.32e-08!9;UBERON:0001277!2.32e-08!9;UBERON:0004923!7.99e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.06e-38,31;UBERON:0005409,4.13e-36,47;UBERON:0000344,2.32e-20,15;UBERON:0001242,9.04e-17,13;UBERON:0001262,9.04e-17,13;UBERON:0004786,9.04e-17,13;UBERON:0001007,1.06e-15,116;UBERON:0001555,1.06e-15,116;UBERON:0007026,1.06e-15,116;UBERON:0004119,2.84e-15,118;UBERON:0000925,2.84e-15,118;UBERON:0006595,2.84e-15,118;UBERON:0004921,1.03e-13,114;UBERON:0000485,5.88e-13,11;UBERON:0004923,1.86e-11,24;UBERON:0003350,1.90e-09,9;UBERON:0004808,1.90e-09,9;UBERON:0001277,1.90e-09,9;UBERON:0002108,6.87e-09,4;UBERON:0000331,1.94e-07,3;UBERON:0002116,1.94e-07,3;UBERON:0001204,1.94e-07,3;UBERON:0001168,1.94e-07,3 | |||
|phase1_expression=8.96833543786846,5.23463111459042,5.91499011206397,2.11724947914781,2.50447864973174,4.70061961353291,5.37309073369709,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,7.67963629408352,7.57050627521661,9.18771142584032,10.3382879078178,7.97243560937789,11.4014051673824,8.31699428207772,17.5167103417691,0,0,0,1.73310971850765,0.997407872150954,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0.896053774194671,0.140444420131752,0,0,0,8.45060518660083,0,0,0,0.649473123033642,2.53359865475099,2.02209778005913,1.37020655662872,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,5.59175283654366,0,0,5.36459815938042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,16.1905203662061,1.05780226665418,0,0,1.28867461322093,1.81515172161008,2.66853652613844,2.47293313946327,2.37264530772256,3.45867804920423,4.52403375840485,4.37704238490532,2.33956904542944,6.29173586057955,4.53889904736858,3.78368419183298,0.758671603812327,0.228497025219458,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.189709611372772,0.295220295959204,0,0.246794327843601,0,0,0,0.224862112384854,0,0.482354319504834,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0.538192240565737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.377210159511796,0.590603785761546,1.53717573971964,1.80899805217755,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0,0.535106452806212,0,0.304464949114599,0,0,0,0.98931751764888,0,0.180938774784468,1.07435109602823,0.656563598980245,2.91480836629851,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0.203319467126849,0.756037385752609,0.418176592028937,1.9652630737156,1.61837215661785,1.32245529160537,3.92633912976044,4.40690909192096,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.360586348559907,0,0,0,0.201652370273681,0.0974578807397524,0.288635524920988,0.116876902181569,0.226730383615211,0,0,0,0,0.93841237725591,3.84618410961257,3.00115730710692,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0,0.222246727801615,0,0.320919209591815,0,0,0.377252682772152,0.187283014939765,0,0,0,0,0.38581844092741,0,0,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.169229215783353,0.548783918618318,0.263069711437843,0,0.561142271657738,0.237270036248348,0.197008964751127,0,0.309873682371932,0,0.249810577937946,0.233931608445408,0.859484216193193,0,0,0 | |||
|short_description=p4@2510049J12Rik | |||
}} |
Latest revision as of 12:00, 26 September 2015
Short description: | p4@2510049J12Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_2510049J12Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 45bp_to_ENSMUST00000088962_5end |
EntrezGene: | 2510049J12Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
columnar/cuboidal epithelial cell | 4.20e-13 | 7 |
epithelial cell | 2.52e-12 | 25 |
brush border epithelial cell | 3.19e-11 | 6 |
gut absorptive cell | 3.19e-11 | 6 |
enterocyte | 3.19e-11 | 6 |
intestinal epithelial cell | 1.90e-09 | 9 |
epithelial cell of alimentary canal | 1.90e-09 | 9 |
endo-epithelial cell | 1.95e-08 | 15 |
M cell of gut | 2.56e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.06e-38 | 31 |
gastrointestinal system | 4.13e-36 | 47 |
mucosa | 2.32e-20 | 15 |
intestinal mucosa | 9.04e-17 | 13 |
wall of intestine | 9.04e-17 | 13 |
gastrointestinal system mucosa | 9.04e-17 | 13 |
digestive system | 1.06e-15 | 116 |
digestive tract | 1.06e-15 | 116 |
primitive gut | 1.06e-15 | 116 |
endoderm-derived structure | 2.84e-15 | 118 |
endoderm | 2.84e-15 | 118 |
presumptive endoderm | 2.84e-15 | 118 |
subdivision of digestive tract | 1.03e-13 | 114 |
simple columnar epithelium | 5.88e-13 | 11 |
organ component layer | 1.86e-11 | 24 |
epithelium of mucosa | 1.90e-09 | 9 |
gastrointestinal system epithelium | 1.90e-09 | 9 |
intestinal epithelium | 1.90e-09 | 9 |
small intestine | 6.87e-09 | 4 |
ileal mucosa | 1.94e-07 | 3 |
ileum | 1.94e-07 | 3 |
mucosa of small intestine | 1.94e-07 | 3 |
wall of small intestine | 1.94e-07 | 3 |