FFCP PHASE1:Mm9::chr6:120244906..120244922,-: Difference between revisions
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{{FFCP|EntrezGene=330406|HGNC=|UniProt=Q6L8S8,A4QPE8|association_with_transcript=-329bp_to_ENSMUST00000057283,NM_198884,uc009dmy.1,uc012erx.1_5end|description=CAGE_peak_1_at_B4galnt3_5end|id=chr6:120244906..120244922,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,8.96e-08,9;CL:0002251,8.96e-08,9;CL:0000075,1.77e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!6.63e-11!43;UBERON:0005409!1.40e-10!59;UBERON:0000344!4.58e-10!15;UBERON:0001242!7.07e-09!13;UBERON:0000060!7.07e-09!13;UBERON:0001262!7.07e-09!13;UBERON:0004786!7.07e-09!13;UBERON:0000485!4.42e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.03e-20,31;UBERON:0005409,2.94e-18,47;UBERON:0000344,5.24e-12,15;UBERON:0001242,1.51e-10,13;UBERON:0001262,1.51e-10,13;UBERON:0004786,1.51e-10,13;UBERON:0000485,1.42e-09,11;UBERON:0003350,8.96e-08,9;UBERON:0004808,8.96e-08,9;UBERON:0001277,8.96e-08,9|phase1_expression=34.5921509746355,57.2319668528552,56.4199056843025,48.3942738090928,41.0734498556005,8.72972213941827,11.9142446703718,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,1.78590909317247,0,0,11.3594620183319,11.2410547722913,32.7312219545562,14.6459078694085,19.8233534071018,9.69119439227507,11.8454160987167,4.8780712344167,0,0,0,2.88851619751275,3.65716219788683,6.12508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0.15279824777681,0.294628585473668,0.569486723196412,0.372798891650601,0.075726193333184,0,0.869593466105033,0,0,0,0,0.448026887097336,6.03911006566533,0,0,0,62.2527915412928,0,0,0,0.216491041011214,0.506719730950197,1.51657333504435,3.53970027129086,0,1.48442139064825,0.346970653532272,0.608930956624282,2.30615497256059,1.50722640552623,1.29347577849275,0.628332956648377,0,0,0,2.58826959915855,1.32504911076236,2.42437626567611,14.9113408974498,0.292780797011547,0,9.70736809792647,0,0,0,0,0,0,0,0,0,0.162241263067758,0.916554274652847,0.870848794270651,0.758168275301024,0,0,0,0,0.150704817835715,0.272145996605311,0.12811372028485,0.187403449119458,0,0.215567992932842,0.189106080167819,1.75951124163949,1.97276159184817,1.66828349535359,5.2237824978325,3.49829631893504,0.995171334092466,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0.219550115291051,0,0,0,46.5890484007155,13.7514294665043,1.06644125267617,1.62565670302307,2.83508414908605,3.83198696784351,4.00280478920767,3.23383564391351,15.6594590309689,4.6115707322723,6.28338022000674,5.37182474511107,5.06906626509712,9.88701349519644,10.59076444386,22.3038226044891,2.84501851429623,2.74196430263349,4.50830942692322,5.29493452397817,7.75809948670503,6.87331034925122,9.86489979138414,10.3327103585722,10.3619160375307,12.8333050478673,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.947457058852424,0.651859905768103,0.509235257325564,0.234690248288502,1.00503754465089,0.476087281772027,0,0,0,0,0.327726629431476,0.172684981865896,0,0,0,0,0,0,0,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.35613120733451,0.325773918707152,0.329940245945071,0,0.485561272309963,0,0,0.295301892880773,0.307435147943927,0.775284879504663,0.727067458955011,0,0.316036757935816,0,0,19.7454971337197,0.540183282093931,2.32845630808958,4.28674070063185,6.56158864476412,4.8159580752559,7.0756078858912,6.08929898229199,0.938686832254841,1.0591603543191,1.98475558249466,7.58476763530808,2.42196640043858,2.89502039655148,6.08798954415996,9.19189038572343,8.74442509889552,0,0,0,0,0,0,0,0,0,0,51.5522133728161,0.949007980743406,1.42323626988794,1.72808545314882,1.46361807210128,2.83871332870031,2.29269388854195,5.20716771069616,22.7727669526106,8.16574331738295,7.45607175704311,0,1.19613236835183,1.15820943319968,0.583353565032143,0.258319646955462,0,0.234714477291508,0.651021924219751,1.8874681996628,0.483168241652012,0.288030006257865,0,1.01362607645082,0.821687657318618,0.51968329191118,0.358053391334963,0.39736270956253,0,0.295379054349154,0.100966449948148,0.15241361331,0,0.487289403698762,0,0.350630706544707,11.5632495643758,39.5134997005835,29.9644281075649,20.1461539636894,0.19318959403219,0,0.549454872801795,17.3638387054043,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,1.99512436700516,1.02440163452481,1.45864030240976,1.25767897576789,2.02227859295016,2.66696073361938,1.44224540067226,1.92551525755089,2.52697211763797,2.78827229879264,3.01802146217722,1.96647165686753,1.47257850531199,2.5845961030026,1.90517476513229,1.50649623728312,2.50781986602817,3.29668720642645,2.50238164228475,2.40008476669791,1.59728225543404,2.62279808942053,2.18019624948493,2.63506265162926,1.86152137361688,1.64635175585495,1.57841826862706,2.30866993537965,5.61142271657738,1.77952527186261,2.46261205938909,2.45538625901814,1.23949472948773,3.66522560864169,4.49659040288303,3.50897412668113,3.65280791882107,2.48674831689496,3.30887128679273,2.31867835620421|short_description=p1@B4galnt3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=330406 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q6L8S8,A4QPE8 | |||
|association_with_transcript=-329bp_to_ENSMUST00000057283,NM_198884,uc009dmy.1,uc012erx.1_5end | |||
|cluster_id=chr6:120244906..120244922,- | |||
|description=CAGE_peak_1_at_B4galnt3_5end | |||
|id=chr6:120244906..120244922,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.96e-08,9;CL:0002251,8.96e-08,9;CL:0000075,1.77e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.63e-11!43;UBERON:0005409!1.40e-10!59;UBERON:0000344!4.58e-10!15;UBERON:0001242!7.07e-09!13;UBERON:0000060!7.07e-09!13;UBERON:0001262!7.07e-09!13;UBERON:0004786!7.07e-09!13;UBERON:0000485!4.42e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.03e-20,31;UBERON:0005409,2.94e-18,47;UBERON:0000344,5.24e-12,15;UBERON:0001242,1.51e-10,13;UBERON:0001262,1.51e-10,13;UBERON:0004786,1.51e-10,13;UBERON:0000485,1.42e-09,11;UBERON:0003350,8.96e-08,9;UBERON:0004808,8.96e-08,9;UBERON:0001277,8.96e-08,9 | |||
|phase1_expression=34.5921509746355,57.2319668528552,56.4199056843025,48.3942738090928,41.0734498556005,8.72972213941827,11.9142446703718,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,1.78590909317247,0,0,11.3594620183319,11.2410547722913,32.7312219545562,14.6459078694085,19.8233534071018,9.69119439227507,11.8454160987167,4.8780712344167,0,0,0,2.88851619751275,3.65716219788683,6.12508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0.15279824777681,0.294628585473668,0.569486723196412,0.372798891650601,0.075726193333184,0,0.869593466105033,0,0,0,0,0.448026887097336,6.03911006566533,0,0,0,62.2527915412928,0,0,0,0.216491041011214,0.506719730950197,1.51657333504435,3.53970027129086,0,1.48442139064825,0.346970653532272,0.608930956624282,2.30615497256059,1.50722640552623,1.29347577849275,0.628332956648377,0,0,0,2.58826959915855,1.32504911076236,2.42437626567611,14.9113408974498,0.292780797011547,0,9.70736809792647,0,0,0,0,0,0,0,0,0,0.162241263067758,0.916554274652847,0.870848794270651,0.758168275301024,0,0,0,0,0.150704817835715,0.272145996605311,0.12811372028485,0.187403449119458,0,0.215567992932842,0.189106080167819,1.75951124163949,1.97276159184817,1.66828349535359,5.2237824978325,3.49829631893504,0.995171334092466,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0.219550115291051,0,0,0,46.5890484007155,13.7514294665043,1.06644125267617,1.62565670302307,2.83508414908605,3.83198696784351,4.00280478920767,3.23383564391351,15.6594590309689,4.6115707322723,6.28338022000674,5.37182474511107,5.06906626509712,9.88701349519644,10.59076444386,22.3038226044891,2.84501851429623,2.74196430263349,4.50830942692322,5.29493452397817,7.75809948670503,6.87331034925122,9.86489979138414,10.3327103585722,10.3619160375307,12.8333050478673,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.947457058852424,0.651859905768103,0.509235257325564,0.234690248288502,1.00503754465089,0.476087281772027,0,0,0,0,0.327726629431476,0.172684981865896,0,0,0,0,0,0,0,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.35613120733451,0.325773918707152,0.329940245945071,0,0.485561272309963,0,0,0.295301892880773,0.307435147943927,0.775284879504663,0.727067458955011,0,0.316036757935816,0,0,19.7454971337197,0.540183282093931,2.32845630808958,4.28674070063185,6.56158864476412,4.8159580752559,7.0756078858912,6.08929898229199,0.938686832254841,1.0591603543191,1.98475558249466,7.58476763530808,2.42196640043858,2.89502039655148,6.08798954415996,9.19189038572343,8.74442509889552,0,0,0,0,0,0,0,0,0,0,51.5522133728161,0.949007980743406,1.42323626988794,1.72808545314882,1.46361807210128,2.83871332870031,2.29269388854195,5.20716771069616,22.7727669526106,8.16574331738295,7.45607175704311,0,1.19613236835183,1.15820943319968,0.583353565032143,0.258319646955462,0,0.234714477291508,0.651021924219751,1.8874681996628,0.483168241652012,0.288030006257865,0,1.01362607645082,0.821687657318618,0.51968329191118,0.358053391334963,0.39736270956253,0,0.295379054349154,0.100966449948148,0.15241361331,0,0.487289403698762,0,0.350630706544707,11.5632495643758,39.5134997005835,29.9644281075649,20.1461539636894,0.19318959403219,0,0.549454872801795,17.3638387054043,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,1.99512436700516,1.02440163452481,1.45864030240976,1.25767897576789,2.02227859295016,2.66696073361938,1.44224540067226,1.92551525755089,2.52697211763797,2.78827229879264,3.01802146217722,1.96647165686753,1.47257850531199,2.5845961030026,1.90517476513229,1.50649623728312,2.50781986602817,3.29668720642645,2.50238164228475,2.40008476669791,1.59728225543404,2.62279808942053,2.18019624948493,2.63506265162926,1.86152137361688,1.64635175585495,1.57841826862706,2.30866993537965,5.61142271657738,1.77952527186261,2.46261205938909,2.45538625901814,1.23949472948773,3.66522560864169,4.49659040288303,3.50897412668113,3.65280791882107,2.48674831689496,3.30887128679273,2.31867835620421 | |||
|short_description=p1@B4galnt3 | |||
}} |
Latest revision as of 13:44, 26 September 2015
Short description: | p1@B4galnt3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_B4galnt3_5end |
Coexpression cluster: | NA |
Association with transcript: | -329bp_to_ENSMUST00000057283, NM_198884, uc009dmy.1, uc012erx.1_5end |
EntrezGene: | B4galnt3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.96e-08 | 9 |
epithelial cell of alimentary canal | 8.96e-08 | 9 |
columnar/cuboidal epithelial cell | 1.77e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.03e-20 | 31 |
gastrointestinal system | 2.94e-18 | 47 |
mucosa | 5.24e-12 | 15 |
intestinal mucosa | 1.51e-10 | 13 |
wall of intestine | 1.51e-10 | 13 |
gastrointestinal system mucosa | 1.51e-10 | 13 |
simple columnar epithelium | 1.42e-09 | 11 |
epithelium of mucosa | 8.96e-08 | 9 |
gastrointestinal system epithelium | 8.96e-08 | 9 |
intestinal epithelium | 8.96e-08 | 9 |