FFCP PHASE1:Hg19::chr9:93589734..93589747,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6850 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11491 | |||
|TSSclassifier=strong | |||
|UniProt=P43405 | |||
|association_with_transcript=-22bp_to_ENST00000375746_5end | |||
|cluster_id=chr9:93589734..93589747,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_10_at_SYK_5end | |||
|id=chr9:93589734..93589747,+ | |||
|ontology_enrichment_celltype=CL:0000945!8.34e-51!24;CL:0000826!8.34e-51!24;CL:0002087!2.00e-46!119;CL:0000738!3.63e-41!140;CL:0002031!2.80e-38!124;CL:0000037!9.04e-34!172;CL:0000566!9.04e-34!172;CL:0002032!8.52e-33!165;CL:0000837!8.52e-33!165;CL:0000236!4.42e-32!14;CL:0000988!3.95e-31!182;CL:0002057!3.62e-26!42;CL:0000860!5.40e-24!45;CL:0002194!1.53e-21!63;CL:0000576!1.53e-21!63;CL:0000040!1.53e-21!63;CL:0000559!1.53e-21!63;CL:0000542!1.73e-21!53;CL:0000051!1.73e-21!53;CL:0002009!1.15e-20!65;CL:0000838!6.17e-20!52;CL:0000766!6.64e-20!76;CL:0000839!1.08e-18!70;CL:0000557!2.47e-18!71;CL:0002393!2.05e-17!9;CL:0002397!2.05e-17!9;CL:0000763!3.75e-13!112;CL:0000049!3.75e-13!112;CL:0000134!4.81e-09!358;CL:0002320!1.27e-08!365;CL:0000875!1.88e-08!3;CL:0002396!1.88e-08!3;CL:0000219!3.75e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000236;9.09e-58;13!CL:0000945;8.76e-57;24!CL:0000542;7.10e-20;53!CL:0002087;5.41e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.63e-57,24;CL:0000826,4.63e-57,24;CL:0000236,9.82e-54,14;CL:0000542,1.50e-27,53;CL:0000051,1.50e-27,53;CL:0000838,1.08e-24,52;CL:0002087,7.32e-20,115;CL:0000738,5.20e-18,136;CL:0002031,6.01e-17,120;CL:0002032,1.53e-14,161;CL:0000837,1.53e-14,161;CL:0000037,9.40e-14,168;CL:0000988,7.84e-13,177 | |||
|ontology_enrichment_development_v019=CL:0000051;7.10e-20;53!UBERON:0004872;1.67e-08;7!UBERON:0001045;1.63e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;1.63e-07;1!DOID:0050177;1.63e-07;1!DOID:12603;1.63e-07;1!DOID:0050427;1.63e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.58e-07,1;DOID:0050177,1.58e-07,1;DOID:0050427,1.58e-07,1;DOID:12603,2.63e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.59e-27!102;UBERON:0003061!4.59e-27!102;UBERON:0002193!4.73e-27!112;UBERON:0002371!1.69e-15!80;UBERON:0002405!5.88e-15!115;UBERON:0001474!6.06e-14!86;UBERON:0004765!6.90e-11!101;UBERON:0001434!6.90e-11!101;UBERON:0000178!8.10e-10!15;UBERON:0000179!8.10e-10!15;UBERON:0000463!8.10e-10!15;UBERON:0003081!5.03e-09!216;UBERON:0002384!4.75e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;3.39e-09;3!UBERON:0002372;1.63e-07;1!UBERON:0000029;1.63e-07;1!UBERON:0001154;1.63e-07;1!UBERON:0001153;1.63e-07;1!UBERON:0009854;1.63e-07;1!UBERON:0001961;1.63e-07;1!UBERON:0001744;1.63e-07;1!UBERON:0001042;1.63e-07;1!UBERON:0001735;1.63e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,5.13e-09,3;UBERON:0004854,5.13e-09,3;UBERON:0009034,5.13e-09,3;UBERON:0002095,5.13e-09,3;UBERON:0004782,5.13e-09,3;UBERON:0003281,5.13e-09,3;UBERON:0009664,5.13e-09,3;UBERON:0002296,5.13e-09,3;UBERON:0005602,5.13e-09,3;UBERON:0001179,5.13e-09,3;UBERON:0006293,5.13e-09,3;UBERON:0000029,8.28e-08,1;UBERON:0001154,8.84e-08,1;UBERON:0001153,8.84e-08,1;UBERON:0001045,8.84e-08,1;UBERON:0002372,3.17e-07,1;UBERON:0001961,3.17e-07,1;UBERON:0001744,3.17e-07,1;UBERON:0001735,3.17e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.410502947249729,0.472264687882075,0,0,0,0,0,0,1.78174561334694,1.56386155736164,0,0,1.60435557976113,0.651032612147555,0,0,0.257575567634187,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0.344745680736619,0.645484683583826,0,0,0,0.449446968890169,0,0.320929027076094,0,0,0.199463657621632,0,0.580418477257168,1.13477044938228,1.24564449799115,0,0,0,2.42159801053347,1.84138817993782,0.949387162322653,0.422510572623884,0.637812899895131,0.419317291016752,0.112328631146495,0,0,0.570025487482497,0.59675003159727,0.91332076882317,1.75996244461323,4.36910889009705,4.44754626931777,5.54749289336459,2.40237592221607,2.29900975981793,5.94940385506376,1.90810750907073,1.70763890732835,1.17447437874188,2.29363936875137,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24702107184155,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0,1.19115887728894,1.64544909234478,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,1.11481905075431,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0,0,0.984678443688556,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729819156862664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9846640872478,1.38328142328561,6.57680031256838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,1.50374268767766,1.03132620757723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0.217716747896961,0,1.01028079521881,0,0,0,0,0,0,0,0,0,0,1.81146414231924,1.60284246151616 | |||
|short_description=p10@SYK | |||
}} |
Latest revision as of 06:09, 18 September 2015
Short description: | p10@SYK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SYK_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -22bp_to_ENST00000375746_5end |
EntrezGene: | SYK |
HGNC: | 11491 |
UniProt: | P43405 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.63e-57 | 24 |
pro-B cell | 4.63e-57 | 24 |
B cell | 9.82e-54 | 14 |
lymphocyte | 1.50e-27 | 53 |
common lymphoid progenitor | 1.50e-27 | 53 |
lymphoid lineage restricted progenitor cell | 1.08e-24 | 52 |
nongranular leukocyte | 7.32e-20 | 115 |
leukocyte | 5.20e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 6.01e-17 | 120 |
hematopoietic oligopotent progenitor cell | 1.53e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.53e-14 | 161 |
hematopoietic stem cell | 9.40e-14 | 168 |
hematopoietic cell | 7.84e-13 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 5.13e-09 | 3 |
gastrointestinal system mesentery | 5.13e-09 | 3 |
stomach region | 5.13e-09 | 3 |
mesentery | 5.13e-09 | 3 |
gastrointestinal system serosa | 5.13e-09 | 3 |
mesentery of stomach | 5.13e-09 | 3 |
gut mesentery | 5.13e-09 | 3 |
dorsal mesentery | 5.13e-09 | 3 |
dorsal mesogastrium | 5.13e-09 | 3 |
peritoneal cavity | 5.13e-09 | 3 |
spleen primordium | 5.13e-09 | 3 |
lymph node | 8.28e-08 | 1 |
vermiform appendix | 8.84e-08 | 1 |
caecum | 8.84e-08 | 1 |
midgut | 8.84e-08 | 1 |
tonsil | 3.17e-07 | 1 |
mucosa-associated lymphoid tissue | 3.17e-07 | 1 |
lymphoid tissue | 3.17e-07 | 1 |
tonsillar ring | 3.17e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.58e-07 | 1 |
monogenic disease | 1.58e-07 | 1 |
xeroderma pigmentosum | 1.58e-07 | 1 |
acute leukemia | 2.63e-07 | 1 |