FFCP PHASE1:Hg19::chr1:101837029..101837058,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:101837029..101837058,+ | |||
|coexpression_cluster_id=C359 | |coexpression_cluster_id=C359 | ||
|description=CAGE_peak_at_chr1:101837029..101837058,+ | |description=CAGE_peak_at_chr1:101837029..101837058,+ | ||
Latest revision as of 19:01, 27 July 2015
| Short description: | p@chr1:101837029..101837058, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr1:101837029..101837058, + |
| Coexpression cluster: | C359_xeroderma_tonsil_acute_colon_lymph_trachea_bladder |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p@chr1:101837029..101837058+ |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphocyte of B lineage | 3.17e-37 | 24 |
| pro-B cell | 3.17e-37 | 24 |
| antibody secreting cell | 2.78e-26 | 1 |
| plasma cell | 2.78e-26 | 1 |
| plasmablast | 2.78e-26 | 1 |
| lymphoid lineage restricted progenitor cell | 2.51e-17 | 52 |
| lymphocyte | 5.29e-17 | 53 |
| common lymphoid progenitor | 5.29e-17 | 53 |
| mature B cell | 7.30e-14 | 2 |
| pre-B-II cell | 7.30e-14 | 2 |
Showing 1 to 10 of 19 entries
| Ontology term | p-value | n |
|---|---|---|
| spleen | 1.81e-09 | 3 |
| gastrointestinal system mesentery | 1.81e-09 | 3 |
| stomach region | 1.81e-09 | 3 |
| mesentery | 1.81e-09 | 3 |
| gastrointestinal system serosa | 1.81e-09 | 3 |
| mesentery of stomach | 1.81e-09 | 3 |
| gut mesentery | 1.81e-09 | 3 |
| dorsal mesentery | 1.81e-09 | 3 |
| dorsal mesogastrium | 1.81e-09 | 3 |
| peritoneal cavity | 1.81e-09 | 3 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| genetic disease | 2.16e-26 | 1 |
| monogenic disease | 2.16e-26 | 1 |
| xeroderma pigmentosum | 2.16e-26 | 1 |
| anemia | 4.61e-26 | 1 |
| lymphoma | 9.33e-23 | 10 |
| hematopoietic system disease | 9.40e-14 | 2 |
| cardiovascular system disease | 1.59e-07 | 4 |
Showing 1 to 7 of 7 entries
