FFCP PHASE1:Mm9::chr12:88020400..88020411,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:88020400..88020411,+
|short_description=p@chr12:88020400..88020411,+
|description=CAGE_peak_at_chr12:88020400..88020411,+
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:88020400..88020411,+ | |||
|description=CAGE_peak_at_chr12:88020400..88020411,+ | |||
|id=chr12:88020400..88020411,+ | |||
|ontology_enrichment_celltype=CL:0000107!8.91e-12!9;CL:0000540!7.52e-07!33;CL:0000047!7.52e-07!33;CL:0000031!7.52e-07!33;CL:0000404!7.52e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.66e-59,9;CL:0000540,2.59e-16,33;CL:0000047,2.59e-16,33;CL:0000031,2.59e-16,33;CL:0000404,2.59e-16,33;CL:0000393,8.25e-14,39;CL:0000211,8.25e-14,39;CL:0002319,1.59e-12,43;CL:0000221,3.05e-12,44;CL:0000133,3.05e-12,44;CL:0002321,1.15e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!8.91e-12!9;UBERON:0000010!4.48e-11!11;UBERON:0000970!1.27e-10!9;UBERON:0000019!1.27e-10!9;UBERON:0000047!1.27e-10!9;UBERON:0004088!1.27e-10!9;UBERON:0002104!1.27e-10!9;UBERON:0001456!1.27e-10!9;UBERON:0003072!1.27e-10!9;UBERON:0003071!1.27e-10!9;UBERON:0004128!1.27e-10!9;UBERON:0000020!1.69e-09!12;UBERON:0001032!1.69e-09!12;UBERON:0004456!1.69e-09!12;UBERON:0005085!1.36e-08!13;UBERON:0001444!2.44e-08!11;UBERON:0004121!9.53e-08!102;UBERON:0000924!9.53e-08!102;UBERON:0006601!9.53e-08!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.66e-59,9;UBERON:0000010,1.39e-48,11;UBERON:0000011,3.67e-34,3;UBERON:0010313,9.86e-33,3;UBERON:0002342,9.86e-33,3;UBERON:0002005,9.86e-33,3;UBERON:0005428,9.86e-33,3;UBERON:0005062,9.86e-33,3;UBERON:0001017,2.40e-07,73;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95;UBERON:0001016,3.81e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0.390361328888111,0.229902104433473,1.44049703844279,0.90422890701429,0.272145996605311,0.640568601424249,0.937017245597288,0.258703370739016,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.464473343720877,0.38660238396628,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,2.52406575533005,1.95219372148319,1.29254038639679,5.73525115086125,4.01037613348309,4.81230102341015,0,0.584511715822624,3.55759000151871,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0.565879024158229,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0.390361328888111,0.229902104433473,1.44049703844279,0.90422890701429,0.272145996605311,0.640568601424249,0.937017245597288,0.258703370739016,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.464473343720877,0.38660238396628,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,2.52406575533005,1.95219372148319,1.29254038639679,5.73525115086125,4.01037613348309,4.81230102341015,0,0.584511715822624,3.55759000151871,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0.565879024158229,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr12:88020400..88020411,+ | |||
}} | }} |
Latest revision as of 10:37, 5 August 2015
Short description: | p@chr12:88020400..88020411, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:88020400..88020411, + |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.66e-59 | 9 |
neuron | 2.59e-16 | 33 |
neuronal stem cell | 2.59e-16 | 33 |
neuroblast | 2.59e-16 | 33 |
electrically signaling cell | 2.59e-16 | 33 |
electrically responsive cell | 8.25e-14 | 39 |
electrically active cell | 8.25e-14 | 39 |
neural cell | 1.59e-12 | 43 |
ectodermal cell | 3.05e-12 | 44 |
neurectodermal cell | 3.05e-12 | 44 |
embryonic cell | 1.15e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 2.66e-59 | 9 |
peripheral nervous system | 1.39e-48 | 11 |
parasympathetic nervous system | 3.67e-34 | 3 |
neural crest-derived structure | 9.86e-33 | 3 |
neural crest | 9.86e-33 | 3 |
enteric nervous system | 9.86e-33 | 3 |
vagal neural crest | 9.86e-33 | 3 |
neural fold | 9.86e-33 | 3 |
central nervous system | 2.40e-07 | 73 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |
nervous system | 3.81e-07 | 75 |