FFCP PHASE1:Hg19::chr4:183399811..183399829,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:183399811..183399829,+ | |||
|description=CAGE_peak_at_chr4:183399811..183399829,+ | |description=CAGE_peak_at_chr4:183399811..183399829,+ | ||
|id=chr4:183399811..183399829,+ | |id=chr4:183399811..183399829,+ | ||
Latest revision as of 03:44, 30 July 2015
| Short description: | p@chr4:183399811..183399829, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr4:183399811..183399829, + |
| Coexpression cluster: | NA |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr4:183399811..183399829+ |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endothelial cell of vascular tree | 2.00e-54 | 24 |
| endothelial cell | 1.37e-42 | 36 |
| capillary endothelial cell | 8.46e-34 | 3 |
| meso-epithelial cell | 9.02e-34 | 45 |
| lymphangioblast | 5.49e-30 | 6 |
| endothelial cell of lymphatic vessel | 5.49e-30 | 6 |
| vascular lymphangioblast | 5.49e-30 | 6 |
| blood vessel endothelial cell | 1.22e-29 | 18 |
| embryonic blood vessel endothelial progenitor cell | 1.22e-29 | 18 |
| lining cell | 7.45e-26 | 58 |
Showing 1 to 10 of 18 entries
| Ontology term | p-value | n |
|---|---|---|
| microcirculatory vessel | 8.46e-34 | 3 |
| endothelium of capillary | 8.46e-34 | 3 |
| capillary | 8.46e-34 | 3 |
| blood vessel endothelium | 1.22e-29 | 18 |
| endothelium | 1.22e-29 | 18 |
| cardiovascular system endothelium | 1.22e-29 | 18 |
| simple squamous epithelium | 3.69e-24 | 22 |
| segment of aorta | 2.79e-23 | 2 |
| thoracic aorta | 2.79e-23 | 2 |
| lymphatic vessel | 1.38e-22 | 8 |
Showing 1 to 10 of 30 entries
| Ontology term | p-value | n |
|---|---|---|
| mixed cell type cancer | 4.56e-07 | 2 |
| carcinosarcoma | 4.56e-07 | 2 |
Showing 1 to 2 of 2 entries
