FFCP PHASE1:Hg19::chr9:96698887..96698909,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:96698887..96698909,+ | |||
|coexpression_cluster_id=C202 | |coexpression_cluster_id=C202 | ||
|description=CAGE_peak_at_chr9:96698887..96698909,+ | |description=CAGE_peak_at_chr9:96698887..96698909,+ | ||
Latest revision as of 03:39, 1 August 2015
| Short description: | p@chr9:96698887..96698909, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr9:96698887..96698909, + |
| Coexpression cluster: | C202_salivary_skin_penis_tongue_uterus_cervical_immature |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p@chr9:96698887..96698909+ |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic stem cell | 2.05e-48 | 5 |
| acinar cell of salivary gland | 1.65e-46 | 3 |
| acinar cell | 3.04e-28 | 5 |
| protein secreting cell | 1.15e-23 | 6 |
| antibody secreting cell | 1.65e-16 | 1 |
| plasma cell | 1.65e-16 | 1 |
| plasmablast | 1.65e-16 | 1 |
| glandular epithelial cell | 5.16e-16 | 9 |
| melanocyte | 2.23e-14 | 10 |
| melanoblast | 2.23e-14 | 10 |
Showing 1 to 10 of 20 entries
| Ontology term | p-value | n |
|---|---|---|
| saliva-secreting gland | 1.15e-23 | 6 |
| gland of oral region | 1.15e-23 | 6 |
| gland of foregut | 1.15e-23 | 6 |
| oral gland | 1.15e-23 | 6 |
| oral cavity | 1.15e-23 | 6 |
| gland of gut | 1.77e-14 | 10 |
| respiratory tract epithelium | 6.94e-08 | 19 |
| lung epithelium | 6.94e-08 | 19 |
| respiratory system | 3.08e-07 | 74 |
| oral opening | 6.89e-07 | 22 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| lung small cell carcinoma | 3.32e-16 | 4 |
| lung carcinoma | 5.43e-16 | 9 |
| lung cancer | 7.67e-10 | 15 |
| bronchus cancer | 1.13e-09 | 7 |
| bronchogenic carcinoma | 1.13e-09 | 7 |
| respiratory system cancer | 2.91e-09 | 16 |
Showing 1 to 6 of 6 entries
