DOID:5409: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=lung small cell carcinoma | |name=lung small cell carcinoma | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:52, 12 September 2014
| Name: | lung small cell carcinoma | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Xrefs: |
| ||
| Synonyms: |
"Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254633006] "SCLC" EXACT [CSP2005:2017-6589] "small cell carcinoma of lung" RELATED [] "small cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254632001] "small cell neuroendocrine carcinoma of lung" EXACT [NCI2004_11_17:C4917] | ||
| Comments: | OMIM mapping confirmed by DO. [SN]. |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | DOID:3905(lung carcinoma) |
|---|
Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10462-106H3
- 10468-106H9
- 10502-107C7
- 10503-107C8
- 10504-107C9
- 10505-107D1
- 10506-107D2
- 10524-107F2
- 10525-107F3
- 10526-107F4
... further results Mouse (Mus musculus)
- 10462-106H3
- 10468-106H9
- 10502-107C7
- 10503-107C8
- 10504-107C9
- 10505-107D1
- 10506-107D2
- 10524-107F2
- 10525-107F3
- 10526-107F4
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5409 (lung small cell carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31 | p@chr6:125378873..125378876, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31 | p@chr6:125378873..125378876, + |
| 2.4e-66 | FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93 | p@chr8:40525350..40525354, - |
| 2.4e-66 | FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93 | p@chr8:40525350..40525354, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr5:6961030..6961034,+#_5be4114e7d0131f457d60e83d77a108d | p@chr5:6961030..6961034, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr16:7354636..7354645,-#_5be4114e7d0131f457d60e83d77a108d | p@chr16:7354636..7354645, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr10:129703363..129703373,+#_5be4114e7d0131f457d60e83d77a108d | p@chr10:129703363..129703373, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr13:76563913..76563916,+#_5be4114e7d0131f457d60e83d77a108d | p@chr13:76563913..76563916, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:86703134..86703137,-#_5be4114e7d0131f457d60e83d77a108d | p@chr3:86703134..86703137, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:220594700..220594702,+#_5be4114e7d0131f457d60e83d77a108d | p6@ENST00000442416 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:86701902..86701920,-#_5be4114e7d0131f457d60e83d77a108d | p@chr3:86701902..86701920, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr11:42142040..42142055,+#_5be4114e7d0131f457d60e83d77a108d | p@chr11:42142040..42142055, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:98065877..98065881,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98065877..98065881, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:186548894..186548902,+#_5be4114e7d0131f457d60e83d77a108d | p@chr3:186548894..186548902, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:8803669..8803680,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:8803669..8803680, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr21:26151976..26151979,+#_5be4114e7d0131f457d60e83d77a108d | p@chr21:26151976..26151979, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:79840276..79840283,+#_5be4114e7d0131f457d60e83d77a108d | p@chr7:79840276..79840283, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:125378772..125378777,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:125378772..125378777, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr17:79974020..79974025,+#_5be4114e7d0131f457d60e83d77a108d | p@chr17:79974020..79974025, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr17:39140393..39140399,-#_5be4114e7d0131f457d60e83d77a108d | p3@KRT40 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr1:33705218..33705225,-#_5be4114e7d0131f457d60e83d77a108d | p@chr1:33705218..33705225, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:84651827..84651832,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:84651827..84651832, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:97626499..97626505,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:97626499..97626505, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:95776285..95776292,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:95776285..95776292, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:23850233..23850248,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:23850233..23850248, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:57525544..57525580,+#_5be4114e7d0131f457d60e83d77a108d | p@chr8:57525544..57525580, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr19:46531131..46531136,+#_5be4114e7d0131f457d60e83d77a108d | p@chr19:46531131..46531136, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:154729003..154729006,-#_5be4114e7d0131f457d60e83d77a108d | p@chr6:154729003..154729006, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:78360522..78360543,+#_5be4114e7d0131f457d60e83d77a108d | p@chr3:78360522..78360543, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:82275651..82275662,+#_5be4114e7d0131f457d60e83d77a108d | p@chr8:82275651..82275662, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:78334430..78334433,-#_5be4114e7d0131f457d60e83d77a108d | p@chr3:78334430..78334433, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:202413051..202413061,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:202413051..202413061, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr11:31093041..31093047,-#_5be4114e7d0131f457d60e83d77a108d | p@chr11:31093041..31093047, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr14:60194070..60194083,-#_5be4114e7d0131f457d60e83d77a108d | p25@RTN1 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:97964849..97964868,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:97964849..97964868, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:79765099..79765103,+#_5be4114e7d0131f457d60e83d77a108d | p29@GNAI1 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr13:95133382..95133389,-#_5be4114e7d0131f457d60e83d77a108d | p@chr13:95133382..95133389, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:129704473..129704478,+#_5be4114e7d0131f457d60e83d77a108d | p@chr10:129704473..129704478, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:234862436..234862439,+#_5be4114e7d0131f457d60e83d77a108d | p16@TRPM8 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr4:41749788..41749795,-#_5be4114e7d0131f457d60e83d77a108d | p10@PHOX2B |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:234862409..234862414,+#_5be4114e7d0131f457d60e83d77a108d | p14@TRPM8 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr15:36739964..36739979,-#_5be4114e7d0131f457d60e83d77a108d | p@chr15:36739964..36739979, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr16:13010455..13010466,+#_5be4114e7d0131f457d60e83d77a108d | p@chr16:13010455..13010466, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr14:89802926..89802934,-#_5be4114e7d0131f457d60e83d77a108d | p@chr14:89802926..89802934, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr9:129234745..129234747,-#_5be4114e7d0131f457d60e83d77a108d | p@chr9:129234745..129234747, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:38441630..38441635,+#_5be4114e7d0131f457d60e83d77a108d | p@chr8:38441630..38441635, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:141715304..141715307,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:141715304..141715307, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr4:139019174..139019198,-#_5be4114e7d0131f457d60e83d77a108d | p@chr4:139019174..139019198, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr5:33650078..33650111,-#_5be4114e7d0131f457d60e83d77a108d | p@chr5:33650078..33650111, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:116215608..116215615,+#_5be4114e7d0131f457d60e83d77a108d | p@chr8:116215608..116215615, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:26482715..26482738,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:26482715..26482738, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr5:33619040..33619056,-#_5be4114e7d0131f457d60e83d77a108d | p@chr5:33619040..33619056, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr17:70940275..70940283,+#_5be4114e7d0131f457d60e83d77a108d | p@chr17:70940275..70940283, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:115898365..115898379,+#_5be4114e7d0131f457d60e83d77a108d | p@chr3:115898365..115898379, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr13:26155734..26155742,+#_5be4114e7d0131f457d60e83d77a108d | p@chr13:26155734..26155742, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr1:181360250..181360259,+#_5be4114e7d0131f457d60e83d77a108d | p@chr1:181360250..181360259, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr14:58439259..58439262,-#_5be4114e7d0131f457d60e83d77a108d | p@chr14:58439259..58439262, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:150914094..150914095,+#_5be4114e7d0131f457d60e83d77a108d | p@chr3:150914094..150914095, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:51255348..51255351,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:51255348..51255351, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr13:76755731..76755739,+#_5be4114e7d0131f457d60e83d77a108d | p@chr13:76755731..76755739, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:84651827..84651832,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:84651827..84651832, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:222160774..222160804,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:222160774..222160804, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:138685510..138685520,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:138685510..138685520, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:222160741..222160750,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:222160741..222160750, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr18:73967160..73967162,-#_5be4114e7d0131f457d60e83d77a108d | p@chr18:73967160..73967162, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:39526005..39526014,-#_5be4114e7d0131f457d60e83d77a108d | p@chr6:39526005..39526014, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:175412075..175412078,+#_5be4114e7d0131f457d60e83d77a108d | p3@uc002uix.1 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:129513919..129513922,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:129513919..129513922, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr18:10085799..10085809,+#_5be4114e7d0131f457d60e83d77a108d | p@chr18:10085799..10085809, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chrX:48394285..48394295,+#_5be4114e7d0131f457d60e83d77a108d | p@chrX:48394285..48394295, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:95766136..95766143,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:95766136..95766143, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:241625621..241625629,+#_5be4114e7d0131f457d60e83d77a108d | p2@ENST00000407635 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:21209872..21209910,+#_5be4114e7d0131f457d60e83d77a108d | p@chr7:21209872..21209910, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr17:59657604..59657621,-#_5be4114e7d0131f457d60e83d77a108d | p@chr17:59657604..59657621, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:241625540..241625541,+#_5be4114e7d0131f457d60e83d77a108d | p14@ENST00000407635 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr9:17454062..17454088,+#_5be4114e7d0131f457d60e83d77a108d | p@chr9:17454062..17454088, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr9:17454025..17454033,+#_5be4114e7d0131f457d60e83d77a108d | p@chr9:17454025..17454033, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:39018314..39018323,+#_5be4114e7d0131f457d60e83d77a108d | p@chr7:39018314..39018323, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr10:129704382..129704389,+#_5be4114e7d0131f457d60e83d77a108d | p@chr10:129704382..129704389, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr12:41186960..41186982,-#_5be4114e7d0131f457d60e83d77a108d | p@chr12:41186960..41186982, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:115999570..115999575,+#_5be4114e7d0131f457d60e83d77a108d | p9@VWA2 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr9:95426545..95426559,-#_5be4114e7d0131f457d60e83d77a108d | p@chr9:95426545..95426559, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:120378742..120378768,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:120378742..120378768, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:97962018..97962029,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:97962018..97962029, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr15:97503439..97503472,+#_5be4114e7d0131f457d60e83d77a108d | p@chr15:97503439..97503472, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr14:60194318..60194325,-#_5be4114e7d0131f457d60e83d77a108d | p22@RTN1 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr11:20538015..20538023,-#_5be4114e7d0131f457d60e83d77a108d | p@chr11:20538015..20538023, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:98080543..98080550,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98080543..98080550, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:98073725..98073731,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98073725..98073731, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:38441630..38441635,+#_5be4114e7d0131f457d60e83d77a108d | p@chr8:38441630..38441635, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr17:39140424..39140431,-#_5be4114e7d0131f457d60e83d77a108d | p4@KRT40 |
| 3.1e-50 | FFCP PHASE1:Hg19::chrX:154251771..154251775,-#_5be4114e7d0131f457d60e83d77a108d | p@chrX:154251771..154251775, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr12:41186960..41186982,-#_5be4114e7d0131f457d60e83d77a108d | p@chr12:41186960..41186982, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:54464033..54464036,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:54464033..54464036, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:189756256..189756260,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:189756256..189756260, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:154858754..154858762,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:154858754..154858762, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr18:39258990..39258996,-#_5be4114e7d0131f457d60e83d77a108d | p@chr18:39258990..39258996, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr14:58045730..58045732,-#_5be4114e7d0131f457d60e83d77a108d | p@chr14:58045730..58045732, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr18:37331745..37331763,-#_5be4114e7d0131f457d60e83d77a108d | p@chr18:37331745..37331763, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr20:13085064..13085070,+#_5be4114e7d0131f457d60e83d77a108d | p@chr20:13085064..13085070, + |
