FFCP PHASE1:Hg19::chr10:43633970..43633986,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=55454 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=24292 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8N6G5 | ||
|association_with_transcript=36bp_to_ENST00000374464,ENST00000374466,NM_018590,uc001jam.1,uc001jan.2_5end | |association_with_transcript=36bp_to_ENST00000374464,ENST00000374466,NM_018590,uc001jam.1,uc001jan.2_5end | ||
|cluster_id=chr10:43633970..43633986,+ | |cluster_id=chr10:43633970..43633986,+ |
Latest revision as of 05:42, 18 September 2015
Short description: | p4@CSGALNACT2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CSGALNACT2_5end |
Coexpression cluster: | C3017_CD14_CD14CD16_Eosinophils_Mast_Neutrophils_Basophils_CD34 |
Association with transcript: | 36bp_to_ENST00000374464, ENST00000374466, NM_018590, uc001jam.1, uc001jan.2_5end |
EntrezGene: | CSGALNACT2 |
HGNC: | 24292 |
UniProt: | Q8N6G5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@CSGALNACT2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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myeloid leukocyte | 2.50e-43 | 72 |
leukocyte | 7.38e-43 | 136 |
granulocyte monocyte progenitor cell | 1.06e-40 | 67 |
myeloid lineage restricted progenitor cell | 5.36e-39 | 66 |
macrophage dendritic cell progenitor | 7.19e-38 | 61 |
defensive cell | 7.59e-38 | 48 |
phagocyte | 7.59e-38 | 48 |
hematopoietic lineage restricted progenitor cell | 1.93e-37 | 120 |
classical monocyte | 1.71e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.71e-36 | 42 |
Showing 1 to 10 of 37 entries
Ontology term | p-value | n |
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hematopoietic system | 1.62e-42 | 98 |
blood island | 1.62e-42 | 98 |
hemolymphoid system | 2.21e-36 | 108 |
bone marrow | 1.08e-35 | 76 |
bone element | 1.93e-33 | 82 |
skeletal element | 8.89e-31 | 90 |
immune system | 1.60e-28 | 93 |
skeletal system | 2.02e-27 | 100 |
connective tissue | 8.74e-21 | 371 |
musculoskeletal system | 1.08e-14 | 167 |
Showing 1 to 10 of 14 entries