FFCP PHASE1:Mm9::chr17:43013391..43013404,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:43013391..43013404,-
|short_description=p5@Cd2ap
|description=CAGE_peak_5_at_Cd2ap_5end
|association_with_transcript=-18bp_to_ENSMUST00000024709,NM_009847...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12488 | |EntrezGene=12488 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2212 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JLQ0,B2RRE8 | |UniProt=Q9JLQ0,B2RRE8 | ||
|association_with_transcript=-18bp_to_ENSMUST00000024709,NM_009847,uc008cot.1,uc012atp.1_5end | |||
|cluster_id=chr17:43013391..43013404,- | |||
|description=CAGE_peak_5_at_Cd2ap_5end | |||
|id=chr17:43013391..43013404,- | |||
|ontology_enrichment_celltype=CL:0002321!1.98e-18!70;CL:0000220!1.98e-18!70;CL:0000548!6.70e-14!115;CL:0000004!6.70e-14!115;CL:0000255!6.70e-14!115;CL:0002371!1.81e-12!118;CL:0000055!1.19e-11!50;CL:0000144!2.38e-11!121;CL:0000012!2.38e-11!121;CL:0000393!2.06e-10!39;CL:0000211!2.06e-10!39;CL:0000221!5.14e-10!44;CL:0000133!5.14e-10!44;CL:0002319!1.48e-09!43;CL:0000066!1.02e-07!25;CL:0000540!1.16e-07!33;CL:0000047!1.16e-07!33;CL:0000031!1.16e-07!33;CL:0000404!1.16e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.26e-25,70;CL:0000393,1.88e-14,39;CL:0000211,1.88e-14,39;CL:0000066,1.01e-12,25;CL:0000221,1.63e-11,44;CL:0000133,1.63e-11,44;CL:0000034,6.81e-11,97;CL:0000107,7.90e-11,9;CL:0002319,9.49e-11,43;CL:0000723,9.98e-11,91;CL:0000048,9.98e-11,91;CL:0000075,1.60e-10,7;CL:0000239,1.43e-09,6;CL:0000677,1.43e-09,6;CL:0000584,1.43e-09,6;CL:0000540,1.58e-09,33;CL:0000047,1.58e-09,33;CL:0000031,1.58e-09,33;CL:0000404,1.58e-09,33;CL:0000223,4.45e-09,20;CL:0002076,3.63e-08,15;CL:0000222,5.38e-08,7;CL:0002563,9.77e-08,9;CL:0002251,9.77e-08,9;CL:0000680,2.19e-07,6;CL:0000187,2.19e-07,6;CL:0000056,2.19e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.50e-09!15;UBERON:0001242!8.36e-08!13;UBERON:0000060!8.36e-08!13;UBERON:0001262!8.36e-08!13;UBERON:0004786!8.36e-08!13;UBERON:0000010!4.07e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.09e-13,15;UBERON:0000010,9.17e-13,11;UBERON:0002410,7.90e-11,9;UBERON:0001242,2.37e-10,13;UBERON:0001262,2.37e-10,13;UBERON:0004786,2.37e-10,13;UBERON:0003350,9.77e-08,9;UBERON:0004808,9.77e-08,9;UBERON:0001277,9.77e-08,9;UBERON:0000485,9.99e-08,11;UBERON:0004923,1.03e-07,24 | |||
|phase1_expression=0.160148847104794,24.0793031271159,17.7449703361919,9.37639055051173,6.51164448930251,15.7806515597176,8.41005506143892,2.7115897922731,0.140788722151667,1.40438715793196,0,2.71225340584144,0,5.07038334030185,0,0,0,0,0.548457734422955,0,5.10259740906419,0.198581902401771,0,10.0795226359846,7.11168771308227,17.8011908875656,19.3842898271584,13.574687659211,10.2612646506442,12.6015064879965,7.31710685162506,0.635030673459631,1.23012957516914,0,0.288851619751275,0.831173226792462,2.6542016314108,0,0,0,0,0,0,3.65100772129174,3.34543873024398,3.48738829107195,2.34717403304412,0.436050312760893,0.659058548203415,1.1665793944457,0.55994568650145,0,0.335565212115473,0,0.672187598284928,2.05807548828758,3.43840127926508,3.09403255366465,0.809265843438391,1.05798195854407,0,1.35537812827653,0,0.899899717281399,0,0.7104801149461,0.599200221036809,1.15265491596466,1.03689612308478,0.540023753326763,0.210324961351382,1.14260393761521,0.883474163806454,0.367472397644862,0.191690942036473,0.919218786610021,0,2.42605942361857,2.76491759861238,0.131886287730194,0.365950574409639,0.52091337055676,1.67509799400829,3.37657566019008,2.13917546887534,1.76777151284201,1.56608848879013,1.4911955666024,2.57469057332826,3.6274348851257,1.15945795480671,0,0,4.31762553310254,1.29955283489534,0,4.35377702408431,2.89731548382698,2.07828803682295,0.70667914902068,3.23939865486365,1.28326477414318,7.64415719119937,14.2213340630666,0.649473123033642,0,0.505524445014783,10.5049169341535,1.8125651855302,0.148442139064825,0,0.608930956624282,0.922461989024234,0.150722640552623,0.470354828542819,0.376999773989026,0,1.3013942122792,0,0,0,0.484875253135222,0,0.292780797011547,0.41889341362691,0.510914110417183,0,0,0,0,0,0,0.173824320192276,0,0.20778804455956,0.162241263067758,0.712875546952214,1.11966273549084,0.505445516867349,0,0,0,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0.787056926989615,0.308534225774757,0.232533944750408,0.268273401399619,0.350296027101508,0.658239399653922,0.492502392237286,0.243206428637567,0,0,0.536825675041487,0.210289948564127,0.102904612379284,0.660837565967596,0.264450566663544,0.426576501070468,0.464473343720877,0.257734922644187,0.403367049246685,0.22237804384487,0.190225626112559,0.949058123089023,0.329397909448022,1.00534083520108,0.198956472041151,0.38992817423824,0.898819408654221,0,0.597423819763102,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.561086559122548,0.569128834118316,0.295220295959204,0,0.493588655687202,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0.505157755894224,0.179397413521912,0,0.369506380333209,0,0,0.339490171550376,0.704070744865506,1.00503754465089,0.476087281772027,0.390267295715598,0.945810864637146,0,0.478364305972461,0.491589944147214,0.345369963731791,0.578596234326046,0,4.89515115436839,0.491764273019036,0.275936746304732,0,0.35163505977661,4.91804836130026,0.504941854408746,2.52406575533005,3.12350995437311,4.09304455692318,4.30143836314594,3.7875774594007,4.24614796183249,4.45291771842384,3.79932615284705,2.37172666767914,0.321321316421807,0.283880170416537,0.534196811001766,0,0.989820737835213,0,0.242780636154981,0,0.188605079755898,0.590603785761546,0.614870295887855,0,0,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,1.40803024838226,0.21183207086382,0,1.15420377059036,0.484393280087717,0.241251699712623,0.238744688006273,0.656563598980245,0.582961673259701,0.18542530201051,0.512612642393558,0.206386867963223,0.185194527369712,0.188368457004691,0.410082683163076,0.228778173206523,0,0.139951452323658,0,0,0.158167996790568,0,0.324016022465404,0.209088296014469,0.436725127492355,0,0.247960367176008,0.26175594198403,0.259229946583586,0,0.56369293868419,0.448549638131936,0.496375471371293,0.194451188344048,0.258319646955462,0.168956125490778,0.234714477291508,0.5208175393758,0.524296722128554,0.724752362478018,0,0.316011120628178,0,0,0.129920822977795,0,0.39736270956253,0,0,0,0,0.201652370273681,0.194915761479505,0.192423683280659,0.350630706544707,0,1.55390167361845,1.70456327558004,0.167884616364078,0.19318959403219,0.187682475451182,0,0.428736758158132,0.501572104035363,0,0,0,0.343706364687375,0,0.755393897389701,0,0,0.453142408984205,0,0.103787347584177,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0.280924522409647,0.384150914429216,0.229741875822453,0,0.115884325944855,0,0,0,0,0.354951612318675,0.238436189947321,0.145346416632329,0.188218760830661,0.338458431566706,0.182927972872773,0.263069711437843,0,0,0.237270036248348,0.29551344712669,0,0.464810523557898,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0.220591419119515,0.463735671240843 | |phase1_expression=0.160148847104794,24.0793031271159,17.7449703361919,9.37639055051173,6.51164448930251,15.7806515597176,8.41005506143892,2.7115897922731,0.140788722151667,1.40438715793196,0,2.71225340584144,0,5.07038334030185,0,0,0,0,0.548457734422955,0,5.10259740906419,0.198581902401771,0,10.0795226359846,7.11168771308227,17.8011908875656,19.3842898271584,13.574687659211,10.2612646506442,12.6015064879965,7.31710685162506,0.635030673459631,1.23012957516914,0,0.288851619751275,0.831173226792462,2.6542016314108,0,0,0,0,0,0,3.65100772129174,3.34543873024398,3.48738829107195,2.34717403304412,0.436050312760893,0.659058548203415,1.1665793944457,0.55994568650145,0,0.335565212115473,0,0.672187598284928,2.05807548828758,3.43840127926508,3.09403255366465,0.809265843438391,1.05798195854407,0,1.35537812827653,0,0.899899717281399,0,0.7104801149461,0.599200221036809,1.15265491596466,1.03689612308478,0.540023753326763,0.210324961351382,1.14260393761521,0.883474163806454,0.367472397644862,0.191690942036473,0.919218786610021,0,2.42605942361857,2.76491759861238,0.131886287730194,0.365950574409639,0.52091337055676,1.67509799400829,3.37657566019008,2.13917546887534,1.76777151284201,1.56608848879013,1.4911955666024,2.57469057332826,3.6274348851257,1.15945795480671,0,0,4.31762553310254,1.29955283489534,0,4.35377702408431,2.89731548382698,2.07828803682295,0.70667914902068,3.23939865486365,1.28326477414318,7.64415719119937,14.2213340630666,0.649473123033642,0,0.505524445014783,10.5049169341535,1.8125651855302,0.148442139064825,0,0.608930956624282,0.922461989024234,0.150722640552623,0.470354828542819,0.376999773989026,0,1.3013942122792,0,0,0,0.484875253135222,0,0.292780797011547,0.41889341362691,0.510914110417183,0,0,0,0,0,0,0.173824320192276,0,0.20778804455956,0.162241263067758,0.712875546952214,1.11966273549084,0.505445516867349,0,0,0,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0.787056926989615,0.308534225774757,0.232533944750408,0.268273401399619,0.350296027101508,0.658239399653922,0.492502392237286,0.243206428637567,0,0,0.536825675041487,0.210289948564127,0.102904612379284,0.660837565967596,0.264450566663544,0.426576501070468,0.464473343720877,0.257734922644187,0.403367049246685,0.22237804384487,0.190225626112559,0.949058123089023,0.329397909448022,1.00534083520108,0.198956472041151,0.38992817423824,0.898819408654221,0,0.597423819763102,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.561086559122548,0.569128834118316,0.295220295959204,0,0.493588655687202,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0.505157755894224,0.179397413521912,0,0.369506380333209,0,0,0.339490171550376,0.704070744865506,1.00503754465089,0.476087281772027,0.390267295715598,0.945810864637146,0,0.478364305972461,0.491589944147214,0.345369963731791,0.578596234326046,0,4.89515115436839,0.491764273019036,0.275936746304732,0,0.35163505977661,4.91804836130026,0.504941854408746,2.52406575533005,3.12350995437311,4.09304455692318,4.30143836314594,3.7875774594007,4.24614796183249,4.45291771842384,3.79932615284705,2.37172666767914,0.321321316421807,0.283880170416537,0.534196811001766,0,0.989820737835213,0,0.242780636154981,0,0.188605079755898,0.590603785761546,0.614870295887855,0,0,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,1.40803024838226,0.21183207086382,0,1.15420377059036,0.484393280087717,0.241251699712623,0.238744688006273,0.656563598980245,0.582961673259701,0.18542530201051,0.512612642393558,0.206386867963223,0.185194527369712,0.188368457004691,0.410082683163076,0.228778173206523,0,0.139951452323658,0,0,0.158167996790568,0,0.324016022465404,0.209088296014469,0.436725127492355,0,0.247960367176008,0.26175594198403,0.259229946583586,0,0.56369293868419,0.448549638131936,0.496375471371293,0.194451188344048,0.258319646955462,0.168956125490778,0.234714477291508,0.5208175393758,0.524296722128554,0.724752362478018,0,0.316011120628178,0,0,0.129920822977795,0,0.39736270956253,0,0,0,0,0.201652370273681,0.194915761479505,0.192423683280659,0.350630706544707,0,1.55390167361845,1.70456327558004,0.167884616364078,0.19318959403219,0.187682475451182,0,0.428736758158132,0.501572104035363,0,0,0,0.343706364687375,0,0.755393897389701,0,0,0.453142408984205,0,0.103787347584177,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0.280924522409647,0.384150914429216,0.229741875822453,0,0.115884325944855,0,0,0,0,0.354951612318675,0.238436189947321,0.145346416632329,0.188218760830661,0.338458431566706,0.182927972872773,0.263069711437843,0,0,0.237270036248348,0.29551344712669,0,0.464810523557898,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0.220591419119515,0.463735671240843 | ||
|short_description=p5@Cd2ap | |||
}} | }} |
Latest revision as of 12:09, 26 September 2015
Short description: | p5@Cd2ap |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Cd2ap_5end |
Coexpression cluster: | MCL_coexpression_mm9:2212 |
Association with transcript: | -18bp_to_ENSMUST00000024709, NM_009847, uc008cot.1, uc012atp.1_5end |
EntrezGene: | Cd2ap |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.26e-25 | 70 |
electrically responsive cell | 1.88e-14 | 39 |
electrically active cell | 1.88e-14 | 39 |
epithelial cell | 1.01e-12 | 25 |
ectodermal cell | 1.63e-11 | 44 |
neurectodermal cell | 1.63e-11 | 44 |
stem cell | 6.81e-11 | 97 |
autonomic neuron | 7.90e-11 | 9 |
neural cell | 9.49e-11 | 43 |
somatic stem cell | 9.98e-11 | 91 |
multi fate stem cell | 9.98e-11 | 91 |
columnar/cuboidal epithelial cell | 1.60e-10 | 7 |
brush border epithelial cell | 1.43e-09 | 6 |
gut absorptive cell | 1.43e-09 | 6 |
enterocyte | 1.43e-09 | 6 |
neuron | 1.58e-09 | 33 |
neuronal stem cell | 1.58e-09 | 33 |
neuroblast | 1.58e-09 | 33 |
electrically signaling cell | 1.58e-09 | 33 |
endodermal cell | 4.45e-09 | 20 |
endo-epithelial cell | 3.63e-08 | 15 |
mesodermal cell | 5.38e-08 | 7 |
intestinal epithelial cell | 9.77e-08 | 9 |
epithelial cell of alimentary canal | 9.77e-08 | 9 |
muscle precursor cell | 2.19e-07 | 6 |
muscle cell | 2.19e-07 | 6 |
myoblast | 2.19e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mucosa | 9.09e-13 | 15 |
peripheral nervous system | 9.17e-13 | 11 |
autonomic nervous system | 7.90e-11 | 9 |
intestinal mucosa | 2.37e-10 | 13 |
wall of intestine | 2.37e-10 | 13 |
gastrointestinal system mucosa | 2.37e-10 | 13 |
epithelium of mucosa | 9.77e-08 | 9 |
gastrointestinal system epithelium | 9.77e-08 | 9 |
intestinal epithelium | 9.77e-08 | 9 |
simple columnar epithelium | 9.99e-08 | 11 |
organ component layer | 1.03e-07 | 24 |