FFCP PHASE1:Mm9::chr17:48557501..48557504,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:48557501..48557504,-
|short_description=p@chr17:48557501..48557504,-
|description=CAGE_peak_at_chr17:48557501..48557504,-
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=232 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:48557501..48557504,- | |||
|description=CAGE_peak_at_chr17:48557501..48557504,- | |||
|id=chr17:48557501..48557504,- | |||
|ontology_enrichment_celltype=CL:0002563!1.64e-26!9;CL:0002251!1.64e-26!9;CL:0000239!4.99e-18!6;CL:0000677!4.99e-18!6;CL:0000212!4.99e-18!6;CL:0000584!4.99e-18!6;CL:0000066!1.33e-17!25;CL:0000075!2.35e-15!7;CL:0002076!3.15e-15!15;CL:0000223!1.98e-13!20;CL:0002250!4.75e-10!3;CL:0000473!4.76e-09!3;CL:0000627!4.76e-09!3;CL:0000682!4.76e-09!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.18e-39,9;CL:0002251,3.18e-39,9;CL:0000239,1.70e-26,6;CL:0000677,1.70e-26,6;CL:0000584,1.70e-26,6;CL:0002076,1.31e-23,15;CL:0000075,8.65e-23,7;CL:0000223,9.85e-18,20;CL:0002250,3.14e-14,3;CL:0000066,3.40e-14,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.13e-29!43;UBERON:0000344!5.51e-27!15;UBERON:0001242!9.28e-27!13;UBERON:0000060!9.28e-27!13;UBERON:0001262!9.28e-27!13;UBERON:0004786!9.28e-27!13;UBERON:0003350!1.64e-26!9;UBERON:0004808!1.64e-26!9;UBERON:0001277!1.64e-26!9;UBERON:0000485!2.20e-21!11;UBERON:0005409!8.62e-20!59;UBERON:0004923!6.72e-16!24;UBERON:0001007!2.96e-08!128;UBERON:0001555!2.96e-08!128;UBERON:0007026!2.96e-08!128;UBERON:0004119!4.76e-08!130;UBERON:0000925!4.76e-08!130;UBERON:0006595!4.76e-08!130;UBERON:0004921!1.44e-07!126;UBERON:0004185!1.44e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.18e-39,9;UBERON:0004808,3.18e-39,9;UBERON:0001277,3.18e-39,9;UBERON:0001242,1.40e-36,13;UBERON:0001262,1.40e-36,13;UBERON:0004786,1.40e-36,13;UBERON:0000485,3.91e-32,11;UBERON:0000344,1.02e-31,15;UBERON:0000160,3.62e-25,31;UBERON:0004923,7.89e-20,24;UBERON:0005409,1.49e-16,47 | |||
|phase1_expression=0,1.39590163055744,1.36499771816861,2.41971369045464,6.51164448930251,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0.57423196411502,0.430761996159075,0.430942465371778,0,1.00812051903972,0,0,0,0,2.3108129580102,0.831173226792462,3.67504841272264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,1.32225283331772,0,0,0,0.201683524623343,0,0,1.89811624617805,0.329397909448022,0,0.397912944082302,0.19496408711912,0.898819408654221,0.864552199498777,0.597423819763102,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.39590163055744,1.36499771816861,2.41971369045464,6.51164448930251,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0.57423196411502,0.430761996159075,0.430942465371778,0,1.00812051903972,0,0,0,0,2.3108129580102,0.831173226792462,3.67504841272264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,1.32225283331772,0,0,0,0.201683524623343,0,0,1.89811624617805,0.329397909448022,0,0.397912944082302,0.19496408711912,0.898819408654221,0.864552199498777,0.597423819763102,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:48557501..48557504,- | |||
}} | }} |
Latest revision as of 01:27, 5 August 2015
Short description: | p@chr17:48557501..48557504, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:48557501..48557504, - |
Coexpression cluster: | MCL_coexpression_mm9:232 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.18e-39 | 9 |
epithelial cell of alimentary canal | 3.18e-39 | 9 |
brush border epithelial cell | 1.70e-26 | 6 |
gut absorptive cell | 1.70e-26 | 6 |
enterocyte | 1.70e-26 | 6 |
endo-epithelial cell | 1.31e-23 | 15 |
columnar/cuboidal epithelial cell | 8.65e-23 | 7 |
endodermal cell | 9.85e-18 | 20 |
intestinal crypt stem cell | 3.14e-14 | 3 |
epithelial cell | 3.40e-14 | 25 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 3.18e-39 | 9 |
gastrointestinal system epithelium | 3.18e-39 | 9 |
intestinal epithelium | 3.18e-39 | 9 |
intestinal mucosa | 1.40e-36 | 13 |
wall of intestine | 1.40e-36 | 13 |
gastrointestinal system mucosa | 1.40e-36 | 13 |
simple columnar epithelium | 3.91e-32 | 11 |
mucosa | 1.02e-31 | 15 |
intestine | 3.62e-25 | 31 |
organ component layer | 7.89e-20 | 24 |
gastrointestinal system | 1.49e-16 | 47 |