FFCP PHASE1:Mm9::chr17:84246069..84246082,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:84246069..84246082,-
|short_description=p3@Haao
|description=CAGE_peak_3_at_Haao_5end
|association_with_transcript=47bp_to_ENSMUST00000000687,NM_025325,uc...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=107766 | |EntrezGene=107766 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=Q78JT3 | |UniProt=Q78JT3 | ||
|association_with_transcript=47bp_to_ENSMUST00000000687,NM_025325,uc008dsk.1,uc008dsl.1,uc012axx.1_5end | |||
|cluster_id=chr17:84246069..84246082,- | |||
|description=CAGE_peak_3_at_Haao_5end | |||
|id=chr17:84246069..84246082,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.21e-11,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!4.20e-22!49;UBERON:0005173!4.20e-22!49;UBERON:0002417!4.20e-22!49;UBERON:0000916!4.20e-22!49;UBERON:0002107!7.07e-21!22;UBERON:0007499!7.07e-21!22;UBERON:0006925!7.07e-21!22;UBERON:0009497!7.07e-21!22;UBERON:0000015!7.07e-21!22;UBERON:0002423!7.07e-21!22;UBERON:0006235!7.07e-21!22;UBERON:0008835!7.07e-21!22;UBERON:0003894!7.07e-21!22;UBERON:0004161!7.07e-21!22;UBERON:0008836!7.07e-21!22;UBERON:0009854!1.36e-19!23;UBERON:0009856!1.36e-19!23;UBERON:0002365!2.41e-17!25;UBERON:0002330!2.41e-17!25;UBERON:0009569!7.50e-14!66;UBERON:0005256!7.74e-12!47;UBERON:0005177!1.13e-08!85;UBERON:0002368!2.54e-08!60;UBERON:0002530!5.53e-07!65;UBERON:0003914!5.75e-07!47;UBERON:0005057!6.80e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.01e-45,22;UBERON:0007499,1.01e-45,22;UBERON:0006925,1.01e-45,22;UBERON:0009497,1.01e-45,22;UBERON:0000015,1.01e-45,22;UBERON:0002423,1.01e-45,22;UBERON:0006235,1.01e-45,22;UBERON:0008835,1.01e-45,22;UBERON:0003894,1.01e-45,22;UBERON:0004161,1.01e-45,22;UBERON:0008836,1.01e-45,22;UBERON:0009854,1.41e-43,23;UBERON:0009856,1.41e-43,23;UBERON:0002365,8.43e-40,25;UBERON:0002330,8.43e-40,25;UBERON:0005172,7.55e-26,49;UBERON:0005173,7.55e-26,49;UBERON:0002417,7.55e-26,49;UBERON:0000916,7.55e-26,49;UBERON:0005256,1.76e-20,45;UBERON:0003104,6.05e-20,61;UBERON:0009142,6.05e-20,61;UBERON:0003914,1.88e-19,47;UBERON:0009569,4.08e-18,66;UBERON:0003929,4.39e-16,55;UBERON:0005177,1.92e-14,79;UBERON:0002368,1.96e-14,60;UBERON:0002530,4.88e-13,65;UBERON:0000490,8.75e-13,66;UBERON:0002100,3.68e-12,90;UBERON:0005911,4.56e-12,69;UBERON:0000949,2.07e-11,72;UBERON:0001041,3.52e-11,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0.137114433605739,0,2.89147186513637,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,63.6713668966226,20.3991400112325,65.3040861881759,74.0745115890343,80.1968127904231,22.7519960613438,0,0,0,0,0,0,0,0,0,0,29.8019926066747,0.258937883647172,0.148442139064825,0.173485326766136,0.304465478312141,0.691846491768175,0.301445281105245,0.23517741427141,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257734922644187,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.407302655690628,0.969762435838129,0.841629838683823,0.379419222745544,5.46157547524528,10.047918581848,9.13139013021324,71.1486305009157,0.500535317148282,0.982794975566015,0.449724224769707,3.44862206360455,6.51178331331525,5.60176873919124,8.0554918486227,2.7562988551756,12.0807021802756,7.18841032636773,10.0478055870496,16.5379966750717,40.9177782274321,51.128262853745,64.1649883413278,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,1.07449492442937,0.26175594198403,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,1.04806581313991,0.735374033800057,0.44449345560323,1.03017528619447,0.962757628775446,0.505394423527595,1.01391719956096,0.188626341386076,0.561849044819294,0.89635213366817,0.34461281373368,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0.685738504770831,0.532427418478012,0.715308569841963,0.581385666529314,0.188218760830661,0.423073039458382,0,0.263069711437843,0.814824683075171,0.561142271657738,0.237270036248348,0.29551344712669,0.409231043169689,0.464810523557898,0.771626443924566,0,0.233931608445408,0.644613162144895,0,0.441182838239031,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0.137114433605739,0,2.89147186513637,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,63.6713668966226,20.3991400112325,65.3040861881759,74.0745115890343,80.1968127904231,22.7519960613438,0,0,0,0,0,0,0,0,0,0,29.8019926066747,0.258937883647172,0.148442139064825,0.173485326766136,0.304465478312141,0.691846491768175,0.301445281105245,0.23517741427141,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257734922644187,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.407302655690628,0.969762435838129,0.841629838683823,0.379419222745544,5.46157547524528,10.047918581848,9.13139013021324,71.1486305009157,0.500535317148282,0.982794975566015,0.449724224769707,3.44862206360455,6.51178331331525,5.60176873919124,8.0554918486227,2.7562988551756,12.0807021802756,7.18841032636773,10.0478055870496,16.5379966750717,40.9177782274321,51.128262853745,64.1649883413278,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,1.07449492442937,0.26175594198403,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,1.04806581313991,0.735374033800057,0.44449345560323,1.03017528619447,0.962757628775446,0.505394423527595,1.01391719956096,0.188626341386076,0.561849044819294,0.89635213366817,0.34461281373368,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0.685738504770831,0.532427418478012,0.715308569841963,0.581385666529314,0.188218760830661,0.423073039458382,0,0.263069711437843,0.814824683075171,0.561142271657738,0.237270036248348,0.29551344712669,0.409231043169689,0.464810523557898,0.771626443924566,0,0.233931608445408,0.644613162144895,0,0.441182838239031,0 | ||
|short_description=p3@Haao | |||
}} | }} |
Latest revision as of 22:56, 26 September 2015
Short description: | p3@Haao |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Haao_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 47bp_to_ENSMUST00000000687, NM_025325, uc008dsk.1, uc008dsl.1, uc012axx.1_5end |
EntrezGene: | Haao |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.21e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 1.01e-45 | 22 |
epithelial sac | 1.01e-45 | 22 |
digestive gland | 1.01e-45 | 22 |
epithelium of foregut-midgut junction | 1.01e-45 | 22 |
anatomical boundary | 1.01e-45 | 22 |
hepatobiliary system | 1.01e-45 | 22 |
foregut-midgut junction | 1.01e-45 | 22 |
hepatic diverticulum | 1.01e-45 | 22 |
liver primordium | 1.01e-45 | 22 |
septum transversum | 1.01e-45 | 22 |
liver bud | 1.01e-45 | 22 |
digestive tract diverticulum | 1.41e-43 | 23 |
sac | 1.41e-43 | 23 |
exocrine gland | 8.43e-40 | 25 |
exocrine system | 8.43e-40 | 25 |
abdomen element | 7.55e-26 | 49 |
abdominal segment element | 7.55e-26 | 49 |
abdominal segment of trunk | 7.55e-26 | 49 |
abdomen | 7.55e-26 | 49 |
trunk mesenchyme | 1.76e-20 | 45 |
mesenchyme | 6.05e-20 | 61 |
entire embryonic mesenchyme | 6.05e-20 | 61 |
epithelial tube | 1.88e-19 | 47 |
subdivision of trunk | 4.08e-18 | 66 |
gut epithelium | 4.39e-16 | 55 |
trunk region element | 1.92e-14 | 79 |
endocrine gland | 1.96e-14 | 60 |
gland | 4.88e-13 | 65 |
unilaminar epithelium | 8.75e-13 | 66 |
trunk | 3.68e-12 | 90 |
endo-epithelium | 4.56e-12 | 69 |
endocrine system | 2.07e-11 | 72 |
foregut | 3.52e-11 | 80 |