FFCP PHASE1:Mm9::chr17:8437904..8437915,+: Difference between revisions
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|id=chr17:8437904..8437915,+
|short_description=p4@Ccr6
|description=CAGE_peak_4_at_Ccr6_5end
|association_with_transcript=-7bp_to_NM_001190338,uc008ajh.2_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12458 | |EntrezGene=12458 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=419 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_NM_001190338,uc008ajh.2_5end | |||
|cluster_id=chr17:8437904..8437915,+ | |||
|description=CAGE_peak_4_at_Ccr6_5end | |||
|id=chr17:8437904..8437915,+ | |||
|ontology_enrichment_celltype=CL:0000553!3.93e-14!6;CL:0000556!3.93e-14!6;CL:0000050!2.63e-09!9;CL:0000414!1.51e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.44e-19,6;CL:0000556,2.44e-19,6;CL:0000945,1.16e-13,1;CL:0000236,1.16e-13,1;CL:0000826,1.16e-13,1;CL:0000050,3.72e-13,9;CL:0000839,2.52e-09,13;CL:0002031,1.96e-08,25;CL:0000763,1.07e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.03e-14!48;UBERON:0002106!8.65e-13!6;UBERON:0004457!8.65e-13!6;UBERON:0000042!8.65e-13!6;UBERON:0004854!8.65e-13!6;UBERON:0009034!8.65e-13!6;UBERON:0002095!8.65e-13!6;UBERON:0004782!8.65e-13!6;UBERON:0003281!8.65e-13!6;UBERON:0009664!8.65e-13!6;UBERON:0002296!8.65e-13!6;UBERON:0005602!8.65e-13!6;UBERON:0001179!8.65e-13!6;UBERON:0006293!8.65e-13!6;UBERON:0002465!3.94e-11!3;UBERON:0002390!2.86e-09!45;UBERON:0003061!2.86e-09!45;UBERON:0002405!1.80e-08!70;UBERON:0001962!4.37e-08!2;UBERON:0001961!4.37e-08!2;UBERON:0001744!4.37e-08!2;UBERON:0003887!1.45e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,3.73e-38,3;UBERON:0001962,1.78e-26,2;UBERON:0001961,1.78e-26,2;UBERON:0001744,1.78e-26,2;UBERON:0003199,4.85e-14,1;UBERON:0000029,2.06e-13,1;UBERON:0001097,2.06e-13,1;UBERON:0003968,2.06e-13,1;UBERON:0001467,2.06e-13,1;UBERON:0002193,1.33e-09,48;UBERON:0002405,1.33e-09,48;UBERON:0002371,1.07e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.809901069559304,0,5.67831897644828,5.21034847701807,3.39511721438424,0,0,0,9.43955294481099,6.65286915094793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.03347818173209,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383062014255563,0.153606533256243,0,0,0,0.558365998002762,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.58937883647172,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0.185194527369712,0.565105371014073,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.809901069559304,0,5.67831897644828,5.21034847701807,3.39511721438424,0,0,0,9.43955294481099,6.65286915094793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.03347818173209,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383062014255563,0.153606533256243,0,0,0,0.558365998002762,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.58937883647172,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0.185194527369712,0.565105371014073,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@Ccr6 | |||
}} | }} |
Latest revision as of 23:00, 26 September 2015
Short description: | p4@Ccr6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ccr6_5end |
Coexpression cluster: | MCL_coexpression_mm9:419 |
Association with transcript: | -7bp_to_NM_001190338, uc008ajh.2_5end |
EntrezGene: | Ccr6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.44e-19 | 6 |
megakaryocyte | 2.44e-19 | 6 |
lymphocyte of B lineage | 1.16e-13 | 1 |
B cell | 1.16e-13 | 1 |
pro-B cell | 1.16e-13 | 1 |
megakaryocyte-erythroid progenitor cell | 3.72e-13 | 9 |
myeloid lineage restricted progenitor cell | 2.52e-09 | 13 |
hematopoietic lineage restricted progenitor cell | 1.96e-08 | 25 |
myeloid cell | 1.07e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 3.73e-38 | 3 |
gut-associated lymphoid tissue | 1.78e-26 | 2 |
mucosa-associated lymphoid tissue | 1.78e-26 | 2 |
lymphoid tissue | 1.78e-26 | 2 |
egg chamber | 4.85e-14 | 1 |
lymph node | 2.06e-13 | 1 |
axillary lymph node | 2.06e-13 | 1 |
peripheral lymph node | 2.06e-13 | 1 |
shoulder | 2.06e-13 | 1 |
hemolymphoid system | 1.33e-09 | 48 |
immune system | 1.33e-09 | 48 |
bone marrow | 1.07e-07 | 16 |