Personal tools

FFCP PHASE1:Mm9::chr18:21119803..21119851,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr18:21119803..21119851,+ |short_description=p4@Rnf125 |description=CAGE_peak_4_at_Rnf125_5end |association_with_transcript=-121bp_to_uc008efa.1_5end |EntrezG...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr18:21119803..21119851,+
|DHSsupport=NA
|short_description=p4@Rnf125
|DPIdataset=NA
|description=CAGE_peak_4_at_Rnf125_5end
|association_with_transcript=-121bp_to_uc008efa.1_5end
|EntrezGene=67664
|EntrezGene=67664
|HGNC=
|HGNC=
|MCL_coexpression_id=120
|TSSclassifier=NA
|UniProt=Q9D9R0
|UniProt=Q9D9R0
|association_with_transcript=-121bp_to_uc008efa.1_5end
|cluster_id=chr18:21119803..21119851,+
|description=CAGE_peak_4_at_Rnf125_5end
|id=chr18:21119803..21119851,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,7.13e-11,25;CL:0002563,1.33e-09,9;CL:0002251,1.33e-09,9;CL:0000223,2.33e-09,20;CL:0000239,6.97e-08,6;CL:0000677,6.97e-08,6;CL:0000584,6.97e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!8.51e-12!130;UBERON:0000925!8.51e-12!130;UBERON:0006595!8.51e-12!130;UBERON:0003929!2.01e-11!55;UBERON:0001007!3.11e-11!128;UBERON:0001555!3.11e-11!128;UBERON:0007026!3.11e-11!128;UBERON:0009854!9.34e-11!23;UBERON:0009856!9.34e-11!23;UBERON:0004921!2.30e-10!126;UBERON:0004185!2.30e-10!126;UBERON:0002107!3.23e-10!22;UBERON:0007499!3.23e-10!22;UBERON:0006925!3.23e-10!22;UBERON:0009497!3.23e-10!22;UBERON:0000015!3.23e-10!22;UBERON:0002423!3.23e-10!22;UBERON:0006235!3.23e-10!22;UBERON:0008835!3.23e-10!22;UBERON:0003894!3.23e-10!22;UBERON:0004161!3.23e-10!22;UBERON:0008836!3.23e-10!22;UBERON:0000344!1.57e-09!15;UBERON:0005911!1.23e-08!69;UBERON:0000490!1.29e-08!66;UBERON:0001242!2.12e-08!13;UBERON:0000060!2.12e-08!13;UBERON:0001262!2.12e-08!13;UBERON:0004786!2.12e-08!13;UBERON:0000160!5.16e-08!43;UBERON:0002365!9.92e-08!25;UBERON:0002330!9.92e-08!25
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.59e-21,31;UBERON:0004119,3.18e-16,118;UBERON:0000925,3.18e-16,118;UBERON:0006595,3.18e-16,118;UBERON:0001007,5.35e-16,116;UBERON:0001555,5.35e-16,116;UBERON:0007026,5.35e-16,116;UBERON:0000344,2.83e-15,15;UBERON:0004921,1.39e-14,114;UBERON:0005409,1.74e-14,47;UBERON:0009854,1.03e-13,23;UBERON:0009856,1.03e-13,23;UBERON:0001242,2.47e-13,13;UBERON:0001262,2.47e-13,13;UBERON:0004786,2.47e-13,13;UBERON:0002107,7.89e-13,22;UBERON:0007499,7.89e-13,22;UBERON:0006925,7.89e-13,22;UBERON:0009497,7.89e-13,22;UBERON:0000015,7.89e-13,22;UBERON:0002423,7.89e-13,22;UBERON:0006235,7.89e-13,22;UBERON:0008835,7.89e-13,22;UBERON:0003894,7.89e-13,22;UBERON:0004161,7.89e-13,22;UBERON:0008836,7.89e-13,22;UBERON:0003929,1.05e-11,55;UBERON:0002365,1.20e-10,25;UBERON:0002330,1.20e-10,25;UBERON:0004923,4.17e-10,24;UBERON:0003350,1.33e-09,9;UBERON:0004808,1.33e-09,9;UBERON:0001277,1.33e-09,9;UBERON:0000490,2.63e-08,66;UBERON:0005911,1.38e-07,69;UBERON:0000485,1.91e-07,11
|phase1_expression=0.320297694209588,34.1995899486574,30.0299497997094,13.6108895088074,12.5223932486587,15.4448930158939,14.0167584357315,0.516493293766305,2.25261955442667,2.34064526321993,0,0.0797721589953364,1.02720437958723,0.786783621770977,0,0,0,0,0.274228867211478,0,0,0,0,7.83962871687693,11.6998733344257,22.3950466004858,23.6919097887491,24.7791917588772,4.18051522804023,4.03248207615889,13.3038306393183,0,0,0,2.02196133825892,1.99481574430191,1.22501613757421,0.418531630736908,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0.878744730937887,0.58328969722285,0.55994568650145,0,0,2.90144856804538,1.68046899571232,0.257259436035947,0.286533439938757,0,0,0,0,1.35537812827653,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0.589257170947335,0.142371680799103,0.186399445825301,17.7956554332983,20.2531781086185,0.289864488701678,89.4840832060642,74.1168753741448,74.4790404460188,40.2861378817555,63.6198179678217,5.05599912474307,0,0.259786004602869,0,0,0,2.54805239706646,0,0,0,0,22.0374887857786,0.258937883647172,0.29688427812965,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,1.29347577849275,1.63366568728578,1.97755974187499,0.433798070759735,0,0,0.220841518460394,0,5.59175283654366,0,0,3.32094171771169,1.07833612055328,0.599902730993408,0.889491589511453,0,0,0,0,0,0,0,0.203678727700633,0.373220911830279,0,89.8586724635244,0,0,0,0.30140963567143,0,0,0.0937017245597288,10.8655415710387,0,0,0,0.43839146485515,0,0.348252166522167,0.205782136407943,0,1.40442637462647,0.772043721344145,0.568326998791185,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0.16455984991348,0,0.243206428637567,0.146199987425332,0.219550115291051,0.268412837520744,0,0,15.8601015832223,3.43785736662608,0,0.232236671860439,1.03093969057675,0.403367049246685,1.11189021922435,1.33157938278791,2.37264530772256,1.4822905925161,3.77002813200404,5.37182474511107,2.53453313254856,1.79763881730844,4.10662294761919,10.1562049359727,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.295220295959204,0.470996183524124,0.493588655687202,4.44678940630723,0.333690211432188,0.196558995113203,0,0.608580364165509,0.241177159752417,1.52775511068852,5.75392274901621,62.9084679887137,24.4359657737393,30.1913233707445,35.7255309761763,29.6435789458833,87.1397128917536,114.993742067546,298.632539723924,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0.221464689648775,0,0,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,1.00988370881749,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,1.32745138339963,0,0.302323556964751,0,0,0,1.03371317267288,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,1.17335854031855,0.63549621259146,0,0.32977250588296,2.42196640043858,0.361877549568935,0.835606408021955,1.64140899745061,2.04036585640896,0,0,0,0.185194527369712,0,0.27338845544205,0,3.39956859987711,1.6794174278839,2.07299960706636,0,0,0,0.432021363287205,0,0.87345025498471,1.34864346384821,3.05817786183743,0.523511883968059,4.53652406521275,0,0,0,0.165458490457098,0,0,0,0,0.911430693907651,0,0,0.288030006257865,0.316011120628178,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0.480781798079875,0.443068581523732,0.403865799792591,0.304827226619999,0.201652370273681,0.0974578807397524,0.0962118416403295,0.467507608726276,0.453460767230423,0.221985953374065,0.179427713218951,0.671538465456314,1.73870634628971,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0.735374033800057,0.44449345560323,0,0,0.505394423527595,0.25347929989024,0.377252682772152,0.468207537349412,0.320125762024346,0.287177344778066,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0.685738504770831,0.177475806159338,0.476872379894642,0.290692833264657,0.282328141245992,0.338458431566706,0.182927972872773,0.526139422875686,0.135804113845862,1.12228454331548,0.237270036248348,0.492522411877817,1.22769312950907,0.464810523557898,0,0,1.40358965067245,7.73535794573874,1.14772999241306,0.661774257358546,0
|phase1_expression=0.320297694209588,34.1995899486574,30.0299497997094,13.6108895088074,12.5223932486587,15.4448930158939,14.0167584357315,0.516493293766305,2.25261955442667,2.34064526321993,0,0.0797721589953364,1.02720437958723,0.786783621770977,0,0,0,0,0.274228867211478,0,0,0,0,7.83962871687693,11.6998733344257,22.3950466004858,23.6919097887491,24.7791917588772,4.18051522804023,4.03248207615889,13.3038306393183,0,0,0,2.02196133825892,1.99481574430191,1.22501613757421,0.418531630736908,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0.878744730937887,0.58328969722285,0.55994568650145,0,0,2.90144856804538,1.68046899571232,0.257259436035947,0.286533439938757,0,0,0,0,1.35537812827653,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0.589257170947335,0.142371680799103,0.186399445825301,17.7956554332983,20.2531781086185,0.289864488701678,89.4840832060642,74.1168753741448,74.4790404460188,40.2861378817555,63.6198179678217,5.05599912474307,0,0.259786004602869,0,0,0,2.54805239706646,0,0,0,0,22.0374887857786,0.258937883647172,0.29688427812965,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,1.29347577849275,1.63366568728578,1.97755974187499,0.433798070759735,0,0,0.220841518460394,0,5.59175283654366,0,0,3.32094171771169,1.07833612055328,0.599902730993408,0.889491589511453,0,0,0,0,0,0,0,0.203678727700633,0.373220911830279,0,89.8586724635244,0,0,0,0.30140963567143,0,0,0.0937017245597288,10.8655415710387,0,0,0,0.43839146485515,0,0.348252166522167,0.205782136407943,0,1.40442637462647,0.772043721344145,0.568326998791185,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0.16455984991348,0,0.243206428637567,0.146199987425332,0.219550115291051,0.268412837520744,0,0,15.8601015832223,3.43785736662608,0,0.232236671860439,1.03093969057675,0.403367049246685,1.11189021922435,1.33157938278791,2.37264530772256,1.4822905925161,3.77002813200404,5.37182474511107,2.53453313254856,1.79763881730844,4.10662294761919,10.1562049359727,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.295220295959204,0.470996183524124,0.493588655687202,4.44678940630723,0.333690211432188,0.196558995113203,0,0.608580364165509,0.241177159752417,1.52775511068852,5.75392274901621,62.9084679887137,24.4359657737393,30.1913233707445,35.7255309761763,29.6435789458833,87.1397128917536,114.993742067546,298.632539723924,0.184753190166605,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0.221464689648775,0,0,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,1.00988370881749,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,1.32745138339963,0,0.302323556964751,0,0,0,1.03371317267288,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,1.17335854031855,0.63549621259146,0,0.32977250588296,2.42196640043858,0.361877549568935,0.835606408021955,1.64140899745061,2.04036585640896,0,0,0,0.185194527369712,0,0.27338845544205,0,3.39956859987711,1.6794174278839,2.07299960706636,0,0,0,0.432021363287205,0,0.87345025498471,1.34864346384821,3.05817786183743,0.523511883968059,4.53652406521275,0,0,0,0.165458490457098,0,0,0,0,0.911430693907651,0,0,0.288030006257865,0.316011120628178,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0.480781798079875,0.443068581523732,0.403865799792591,0.304827226619999,0.201652370273681,0.0974578807397524,0.0962118416403295,0.467507608726276,0.453460767230423,0.221985953374065,0.179427713218951,0.671538465456314,1.73870634628971,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0.735374033800057,0.44449345560323,0,0,0.505394423527595,0.25347929989024,0.377252682772152,0.468207537349412,0.320125762024346,0.287177344778066,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0.685738504770831,0.177475806159338,0.476872379894642,0.290692833264657,0.282328141245992,0.338458431566706,0.182927972872773,0.526139422875686,0.135804113845862,1.12228454331548,0.237270036248348,0.492522411877817,1.22769312950907,0.464810523557898,0,0,1.40358965067245,7.73535794573874,1.14772999241306,0.661774257358546,0
|short_description=p4@Rnf125
}}
}}

Latest revision as of 02:23, 27 September 2015

Short description:p4@Rnf125
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rnf125_5end
Coexpression cluster:MCL_coexpression_mm9:120
Association with transcript: -121bp_to_uc008efa.1_5end
EntrezGene:Rnf125
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Rnf125

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I534.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I630.03
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.61
CD326+ enterocyte, pool2.CNhs13197.11849-124I412.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I715.44
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.02
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.79
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.70
GP2+ M cell, pool1.CNhs13228.11845-124H922.40
GP2+ M cell, pool2.CNhs13231.11846-124I123.69
GP2+ M cell, pool3.CNhs13240.11847-124I224.78
Ileum epithelium, pool1.CNhs13199.10252-104B94.18
Ileum epithelium, pool2.CNhs13232.10253-104C14.03
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C813.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D917.80
Mouse Schwann, donor2.CNhs12573.11746-123F920.25
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F789.48
Mouse hepatocyte, donor1.CNhs13078.11714-123C474.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C874.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F440.29
Mouse hepatocyte, donor8.CNhs13091.11824-124F663.62
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B622.04
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H73.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G489.86
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A210.87
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I315.86
intestine, adult.CNhs10496.178-9A33.44
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F25.37
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E34.11
intestine, neonate N30.CNhs11131.1384-42G110.16
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B24.45
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G45.75
liver, neonate N00.CNhs11117.641-24F462.91
liver, neonate N03.CNhs11123.1345-25G224.44
liver, neonate N06.CNhs11101.684-20A830.19
liver, neonate N07.CNhs11103.716-20H235.73
liver, neonate N10.CNhs11115.751-24B929.64
liver, neonate N20.CNhs11220.823-25A387.14
liver, neonate N25.CNhs11198.1368-26H1114.99
liver, neonate N30.CNhs11106.1382-42D1298.63
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.07
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A93.06
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I14.54
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C27.74
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell7.13e-1125
intestinal epithelial cell1.33e-099
epithelial cell of alimentary canal1.33e-099
endodermal cell2.33e-0920
brush border epithelial cell6.97e-086
gut absorptive cell6.97e-086
enterocyte6.97e-086

Uber anatomy
Ontology termp-valuen
intestine2.59e-2131
endoderm-derived structure3.18e-16118
endoderm3.18e-16118
presumptive endoderm3.18e-16118
digestive system5.35e-16116
digestive tract5.35e-16116
primitive gut5.35e-16116
mucosa2.83e-1515
subdivision of digestive tract1.39e-14114
gastrointestinal system1.74e-1447
digestive tract diverticulum1.03e-1323
sac1.03e-1323
intestinal mucosa2.47e-1313
wall of intestine2.47e-1313
gastrointestinal system mucosa2.47e-1313
liver7.89e-1322
epithelial sac7.89e-1322
digestive gland7.89e-1322
epithelium of foregut-midgut junction7.89e-1322
anatomical boundary7.89e-1322
hepatobiliary system7.89e-1322
foregut-midgut junction7.89e-1322
hepatic diverticulum7.89e-1322
liver primordium7.89e-1322
septum transversum7.89e-1322
liver bud7.89e-1322
gut epithelium1.05e-1155
exocrine gland1.20e-1025
exocrine system1.20e-1025
organ component layer4.17e-1024
epithelium of mucosa1.33e-099
gastrointestinal system epithelium1.33e-099
intestinal epithelium1.33e-099
unilaminar epithelium2.63e-0866
endo-epithelium1.38e-0769
simple columnar epithelium1.91e-0711
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:21119803..21119851,%2B&oldid=4287405"