FFCP PHASE1:Hg19::chr17:4642833..4642875,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=58191 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=16642 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9H2A7 | ||
|association_with_transcript=347bp_to_ENST00000293778,NM_001100812,NM_022059,uc002fyr.3,uc002fys.3_5end | |association_with_transcript=347bp_to_ENST00000293778,NM_001100812,NM_022059,uc002fyr.3,uc002fys.3_5end | ||
|cluster_id=chr17:4642833..4642875,- | |cluster_id=chr17:4642833..4642875,- | ||
Latest revision as of 06:13, 25 September 2015
| Short description: | p3@CXCL16 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_CXCL16_5end |
| Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
| Association with transcript: | 347bp_to_ENST00000293778, NM_001100812, NM_022059, uc002fyr.3, uc002fys.3_5end |
| EntrezGene: | CXCL16 |
| HGNC: | 16642 |
| UniProt: | Q9H2A7 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@CXCL16 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| myeloid leukocyte | 3.46e-32 | 72 |
| granulocyte monocyte progenitor cell | 1.23e-29 | 67 |
| defensive cell | 1.49e-28 | 48 |
| phagocyte | 1.49e-28 | 48 |
| macrophage dendritic cell progenitor | 5.74e-28 | 61 |
| myeloid lineage restricted progenitor cell | 1.89e-27 | 66 |
| monopoietic cell | 9.67e-27 | 59 |
| monocyte | 9.67e-27 | 59 |
| monoblast | 9.67e-27 | 59 |
| promonocyte | 9.67e-27 | 59 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 3.42e-27 | 76 |
| bone element | 1.07e-25 | 82 |
| immune system | 3.87e-25 | 93 |
| skeletal element | 2.33e-23 | 90 |
| skeletal system | 1.16e-22 | 100 |
| hemolymphoid system | 3.29e-20 | 108 |
| hematopoietic system | 6.43e-20 | 98 |
| blood island | 6.43e-20 | 98 |
| developing anatomical structure | 1.06e-11 | 581 |
| musculoskeletal system | 1.21e-10 | 167 |
Showing 1 to 10 of 20 entries
