FFCP PHASE1:Mm9::chr18:66618241..66618258,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:66618241..66618258,+
|short_description=p1@Pmaip1
|description=CAGE_peak_1_at_Pmaip1_5end
|association_with_transcript=0bp_to_ENSMUST00000025399,NM_021451...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=58801 | |EntrezGene=58801 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JM54 | |UniProt=Q9JM54 | ||
|association_with_transcript=0bp_to_ENSMUST00000025399,NM_021451,uc008fft.1_5end | |||
|cluster_id=chr18:66618241..66618258,+ | |||
|description=CAGE_peak_1_at_Pmaip1_5end | |||
|id=chr18:66618241..66618258,+ | |||
|ontology_enrichment_celltype=CL:0002563!7.11e-07!9;CL:0002251!7.11e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.87e-07,9;CL:0002251,6.87e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!4.58e-11!24;UBERON:0000344!2.06e-10!15;UBERON:0001242!3.63e-09!13;UBERON:0000060!3.63e-09!13;UBERON:0001262!3.63e-09!13;UBERON:0004786!3.63e-09!13;UBERON:0005409!2.16e-07!59;UBERON:0003350!7.11e-07!9;UBERON:0004808!7.11e-07!9;UBERON:0001277!7.11e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.90e-14,47;UBERON:0000160,2.79e-13,31;UBERON:0004923,4.30e-11,24;UBERON:0000344,1.94e-10,15;UBERON:0001242,3.46e-09,13;UBERON:0001262,3.46e-09,13;UBERON:0004786,3.46e-09,13;UBERON:0004119,6.08e-07,118;UBERON:0000925,6.08e-07,118;UBERON:0006595,6.08e-07,118;UBERON:0003350,6.87e-07,9;UBERON:0004808,6.87e-07,9;UBERON:0001277,6.87e-07,9 | |||
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| ||
|short_description=p1@Pmaip1 | |||
}} | }} |
Latest revision as of 15:56, 1 October 2015
Short description: | p1@Pmaip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pmaip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000025399, NM_021451, uc008fft.1_5end |
EntrezGene: | Pmaip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.87e-07 | 9 |
epithelial cell of alimentary canal | 6.87e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 4.90e-14 | 47 |
intestine | 2.79e-13 | 31 |
organ component layer | 4.30e-11 | 24 |
mucosa | 1.94e-10 | 15 |
intestinal mucosa | 3.46e-09 | 13 |
wall of intestine | 3.46e-09 | 13 |
gastrointestinal system mucosa | 3.46e-09 | 13 |
endoderm-derived structure | 6.08e-07 | 118 |
endoderm | 6.08e-07 | 118 |
presumptive endoderm | 6.08e-07 | 118 |
epithelium of mucosa | 6.87e-07 | 9 |
gastrointestinal system epithelium | 6.87e-07 | 9 |
intestinal epithelium | 6.87e-07 | 9 |