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FFCP PHASE1:Mm9::chr1:135142669..135142676,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr1:135142669..135142676,+
|DHSsupport=NA
|short_description=p1@Plekha6
|DPIdataset=NA
|description=CAGE_peak_1_at_Plekha6_5end
|association_with_transcript=0bp_to_ENSMUST00000038295,ENSMUST00000086504,ENSMUST00000105082,NM_001160268,NM_182930,uc007cpu.2,uc007cpv.2_5end
|EntrezGene=240753
|EntrezGene=240753
|HGNC=
|HGNC=
|MCL_coexpression_id=179
|TSSclassifier=NA
|UniProt=Q7TQG1,E9PVV7,E9PX43,Q69ZU4
|UniProt=Q7TQG1,E9PVV7,E9PX43,Q69ZU4
|association_with_transcript=0bp_to_ENSMUST00000038295,ENSMUST00000086504,ENSMUST00000105082,NM_001160268,NM_182930,uc007cpu.2,uc007cpv.2_5end
|cluster_id=chr1:135142669..135142676,+
|description=CAGE_peak_1_at_Plekha6_5end
|id=chr1:135142669..135142676,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!1.07e-16!59;UBERON:0005172!2.49e-14!49;UBERON:0005173!2.49e-14!49;UBERON:0002417!2.49e-14!49;UBERON:0000916!2.49e-14!49;UBERON:0000160!3.47e-14!43;UBERON:0001007!5.38e-14!128;UBERON:0001555!5.38e-14!128;UBERON:0007026!5.38e-14!128;UBERON:0004119!1.53e-13!130;UBERON:0000925!1.53e-13!130;UBERON:0006595!1.53e-13!130;UBERON:0002107!1.61e-13!22;UBERON:0007499!1.61e-13!22;UBERON:0006925!1.61e-13!22;UBERON:0009497!1.61e-13!22;UBERON:0000015!1.61e-13!22;UBERON:0002423!1.61e-13!22;UBERON:0006235!1.61e-13!22;UBERON:0008835!1.61e-13!22;UBERON:0003894!1.61e-13!22;UBERON:0004161!1.61e-13!22;UBERON:0008836!1.61e-13!22;UBERON:0002365!2.07e-13!25;UBERON:0002330!2.07e-13!25;UBERON:0004921!4.16e-13!126;UBERON:0004185!4.16e-13!126;UBERON:0005177!1.05e-12!85;UBERON:0009854!2.52e-12!23;UBERON:0009856!2.52e-12!23;UBERON:0003914!1.73e-11!47;UBERON:0009569!2.63e-10!66;UBERON:0000466!5.71e-10!79;UBERON:0000481!1.75e-09!230;UBERON:0002100!1.33e-08!98;UBERON:0002108!4.50e-07!16
|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.52e-17,25;UBERON:0002330,1.52e-17,25;UBERON:0002107,2.82e-17,22;UBERON:0007499,2.82e-17,22;UBERON:0006925,2.82e-17,22;UBERON:0009497,2.82e-17,22;UBERON:0000015,2.82e-17,22;UBERON:0002423,2.82e-17,22;UBERON:0006235,2.82e-17,22;UBERON:0008835,2.82e-17,22;UBERON:0003894,2.82e-17,22;UBERON:0004161,2.82e-17,22;UBERON:0008836,2.82e-17,22;UBERON:0009854,4.10e-16,23;UBERON:0009856,4.10e-16,23;UBERON:0005172,1.99e-13,49;UBERON:0005173,1.99e-13,49;UBERON:0002417,1.99e-13,49;UBERON:0000916,1.99e-13,49;UBERON:0005177,5.36e-13,79;UBERON:0005409,1.33e-12,47;UBERON:0003914,1.39e-12,47;UBERON:0001007,1.69e-11,116;UBERON:0001555,1.69e-11,116;UBERON:0007026,1.69e-11,116;UBERON:0004119,5.82e-11,118;UBERON:0000925,5.82e-11,118;UBERON:0006595,5.82e-11,118;UBERON:0004921,1.48e-10,114;UBERON:0000160,3.03e-10,31;UBERON:0002100,7.13e-10,90;UBERON:0003104,3.25e-08,61;UBERON:0009142,3.25e-08,61;UBERON:0001264,3.90e-08,12;UBERON:0009569,7.58e-08,66;UBERON:0003929,2.19e-07,55;UBERON:0000949,9.40e-07,72
|phase1_expression=0,2.79180326111489,1.36499771816861,1.81478526784098,1.00179145989269,6.88305014838748,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99406927420056,0,0,6.07971206614945,4.81759490241057,1.14846392823004,1.29228598847722,3.878482188346,0.950117097281869,0.756090389279792,2.88249663851896,0,0,0,4.33277429626912,3.32469290716985,5.10423390655923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0.220868540951614,0,0.0958454710182364,0,0,0,0,0.659431438650969,0.365950574409639,0,0,0,0,0,0,0.186399445825301,0,0.0755715601067855,11.0148505706638,8.60423876981386,4.75979933595425,27.5248627735287,42.8852435515462,25.0895056774508,9.69066498909088,0,0,0,0,0,0,0,0,0.253359865475099,0,14.9580882431969,0,0.29688427812965,1.21439728736295,1.52232739156071,0.691846491768175,0.452167921657868,0.823120949949934,0.251333182659351,0.988779870937496,0.289198713839823,0,0,0,0,0,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.248813941220186,0.758168275301024,12.2056276414155,1.30120442962704,1.14951052216736,0.540186389416048,0,0,0,0,3.88055056108524,0.215567992932842,0,0.175951124163949,0,0.556094498451196,0,0.205782136407943,1.99034266818493,0,0,0,4.34964122324554,4.92504725960302,2.70093092191522,4.26140524053378,2.95146347621106,6.17068451549513,6.74348439776183,3.75582761959467,1.75148013550754,2.46839774870221,0.164167464079095,1.37816976227955,1.02339991197733,0.878200461164203,0.805238512562231,0,0,2.97376904685418,1.32225283331772,3.62590025909898,1.85789337488351,1.80414445850931,2.8235693447268,1.33426826306922,1.71203063501303,1.89811624617805,1.15289268306808,3.2673577144035,4.77495532898762,2.9244613067868,3.59527763461689,3.24207074812041,4.18196673834171,1.70701110857774,1.82797620175566,5.63538678365402,3.66572390121566,5.43066964069352,3.71719845418688,11.0031574596208,29.5220295959204,34.2257226694197,29.7387165051539,31.4239784712378,1.16791574001266,2.75182593158484,1.79889689907883,3.04290182082754,6.27060615356284,4.83789118384698,6.90470729881945,9.24170792617702,10.9824565275233,15.814502718009,21.2120340171047,23.7148631567066,49.0003023217397,25.1156378930677,37.1481511449793,0.369506380333209,0.37898282354097,0.325929952884052,1.18821560042632,1.40814148973101,0.502518772325447,0,0,0.315270288212382,0,0.318909537314974,0.983179888294428,0.345369963731791,0.433947175744535,0,0,5.90117127622843,6.62248191131358,0,0.117211686592203,0,0,0.315508219416257,0,0.430846795465598,0,0,0,0,0,0,0,0.709700426041343,1.06839362200353,0.488660878060728,2.47455184458803,3.98235415019888,3.39892890616974,3.93020624054176,4.90373207365335,5.31543407185391,3.68922177532713,2.32585463851399,6.5436071305951,6.77345018930971,11.6933600436252,2.10837217149998,7.21948802737308,1.36175842301515,0.36012218806262,0.776152102696527,0.214337035031592,0.177340233642274,0.713475270408282,0.493647061806363,1.2178597964584,0,0.42366414172764,1.10264199027481,0,0,0,0,0.164140899745061,4.66369338607761,0,0,2.47664241555867,0.555583582109135,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,8.59203556213602,1.89801596148681,2.64315307264903,3.13215488383224,2.92723614420256,4.58561383866973,2.83215127408124,7.52146447100557,10.7319936213452,1.94422459937689,0,0,2.39226473670366,1.32366792365678,0.972255941720238,1.03327858782185,1.01373675294467,0.234714477291508,0.5208175393758,0.209718688851422,0,0,0.316011120628178,0.202725215290164,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,0.375364950902364,2.01466786693992,0.643105137237198,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.518936737920883,1.59609949360412,1.19513524027894,0.972426868273176,1.04806581313991,0.367687016900028,0.666740183404846,1.03017528619447,0.64183841918363,1.01078884705519,0.760437899670719,0.754505365544305,0.842773567228942,0.960377286073039,0.804096565378586,0,0.579421629724277,1.35036454324594,0.824171801606613,0.883193520806384,0.685738504770831,0.177475806159338,0.953744759789284,0.872078499793971,0.752875043322645,0.930760686808441,0.73171189149109,0.789209134313529,0.679020569229309,0.561142271657738,0.949080144993393,0.985044823755635,0,0.619747364743864,0.771626443924566,0.249810577937946,0.935726433781634,1.50409737833809,0,0.220591419119515,0
|phase1_expression=0,2.79180326111489,1.36499771816861,1.81478526784098,1.00179145989269,6.88305014838748,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99406927420056,0,0,6.07971206614945,4.81759490241057,1.14846392823004,1.29228598847722,3.878482188346,0.950117097281869,0.756090389279792,2.88249663851896,0,0,0,4.33277429626912,3.32469290716985,5.10423390655923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0.220868540951614,0,0.0958454710182364,0,0,0,0,0.659431438650969,0.365950574409639,0,0,0,0,0,0,0.186399445825301,0,0.0755715601067855,11.0148505706638,8.60423876981386,4.75979933595425,27.5248627735287,42.8852435515462,25.0895056774508,9.69066498909088,0,0,0,0,0,0,0,0,0.253359865475099,0,14.9580882431969,0,0.29688427812965,1.21439728736295,1.52232739156071,0.691846491768175,0.452167921657868,0.823120949949934,0.251333182659351,0.988779870937496,0.289198713839823,0,0,0,0,0,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.248813941220186,0.758168275301024,12.2056276414155,1.30120442962704,1.14951052216736,0.540186389416048,0,0,0,0,3.88055056108524,0.215567992932842,0,0.175951124163949,0,0.556094498451196,0,0.205782136407943,1.99034266818493,0,0,0,4.34964122324554,4.92504725960302,2.70093092191522,4.26140524053378,2.95146347621106,6.17068451549513,6.74348439776183,3.75582761959467,1.75148013550754,2.46839774870221,0.164167464079095,1.37816976227955,1.02339991197733,0.878200461164203,0.805238512562231,0,0,2.97376904685418,1.32225283331772,3.62590025909898,1.85789337488351,1.80414445850931,2.8235693447268,1.33426826306922,1.71203063501303,1.89811624617805,1.15289268306808,3.2673577144035,4.77495532898762,2.9244613067868,3.59527763461689,3.24207074812041,4.18196673834171,1.70701110857774,1.82797620175566,5.63538678365402,3.66572390121566,5.43066964069352,3.71719845418688,11.0031574596208,29.5220295959204,34.2257226694197,29.7387165051539,31.4239784712378,1.16791574001266,2.75182593158484,1.79889689907883,3.04290182082754,6.27060615356284,4.83789118384698,6.90470729881945,9.24170792617702,10.9824565275233,15.814502718009,21.2120340171047,23.7148631567066,49.0003023217397,25.1156378930677,37.1481511449793,0.369506380333209,0.37898282354097,0.325929952884052,1.18821560042632,1.40814148973101,0.502518772325447,0,0,0.315270288212382,0,0.318909537314974,0.983179888294428,0.345369963731791,0.433947175744535,0,0,5.90117127622843,6.62248191131358,0,0.117211686592203,0,0,0.315508219416257,0,0.430846795465598,0,0,0,0,0,0,0,0.709700426041343,1.06839362200353,0.488660878060728,2.47455184458803,3.98235415019888,3.39892890616974,3.93020624054176,4.90373207365335,5.31543407185391,3.68922177532713,2.32585463851399,6.5436071305951,6.77345018930971,11.6933600436252,2.10837217149998,7.21948802737308,1.36175842301515,0.36012218806262,0.776152102696527,0.214337035031592,0.177340233642274,0.713475270408282,0.493647061806363,1.2178597964584,0,0.42366414172764,1.10264199027481,0,0,0,0,0.164140899745061,4.66369338607761,0,0,2.47664241555867,0.555583582109135,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,8.59203556213602,1.89801596148681,2.64315307264903,3.13215488383224,2.92723614420256,4.58561383866973,2.83215127408124,7.52146447100557,10.7319936213452,1.94422459937689,0,0,2.39226473670366,1.32366792365678,0.972255941720238,1.03327858782185,1.01373675294467,0.234714477291508,0.5208175393758,0.209718688851422,0,0,0.316011120628178,0.202725215290164,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,0.375364950902364,2.01466786693992,0.643105137237198,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.518936737920883,1.59609949360412,1.19513524027894,0.972426868273176,1.04806581313991,0.367687016900028,0.666740183404846,1.03017528619447,0.64183841918363,1.01078884705519,0.760437899670719,0.754505365544305,0.842773567228942,0.960377286073039,0.804096565378586,0,0.579421629724277,1.35036454324594,0.824171801606613,0.883193520806384,0.685738504770831,0.177475806159338,0.953744759789284,0.872078499793971,0.752875043322645,0.930760686808441,0.73171189149109,0.789209134313529,0.679020569229309,0.561142271657738,0.949080144993393,0.985044823755635,0,0.619747364743864,0.771626443924566,0.249810577937946,0.935726433781634,1.50409737833809,0,0.220591419119515,0
|short_description=p1@Plekha6
}}
}}

Latest revision as of 09:24, 26 September 2015

Short description:p1@Plekha6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Plekha6_5end
Coexpression cluster:MCL_coexpression_mm9:179
Association with transcript: 0bp_to_ENSMUST00000038295, ENSMUST00000086504, ENSMUST00000105082, NM_001160268, NM_182930, uc007cpu.2, uc007cpv.2_5end
EntrezGene:Plekha6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Plekha6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.88
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.14
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.82
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I23.88
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.33
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.01
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C827.52
Mouse hepatocyte, donor6.CNhs13090.11822-124F442.89
Mouse hepatocyte, donor8.CNhs13091.11824-124F625.09
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B614.96
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G412.21
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.35
heart, embryo E12.CNhs11015.353-12F54.93
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D44.26
heart, embryo E15.CNhs11017.431-16C82.95
heart, embryo E16.CNhs11021.457-17C66.17
heart, embryo E17.CNhs11025.479-18E56.74
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E31.75
heart, neonate N03.CNhs11221.1349-25I22.47
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G11.38
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I53.63
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H42.82
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F24.77
intestine, neonate N10.CNhs11098.755-23A52.92
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E33.24
intestine, neonate N30.CNhs11131.1384-42G14.18
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I23.67
kidney, embryo E18.CNhs11001.1288-20C75.43
kidney, neonate N00.CNhs11214.646-21G73.72
kidney, neonate N10.CNhs11206.758-6D511.00
kidney, neonate N20.CNhs11113.832-19I129.52
kidney, neonate N25.CNhs11122.1353-25F334.23
kidney, neonate N30.CNhs11203.1385-42H129.74
liver, adult pregnant day01.CNhs10466.508-5B231.42
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H62.75
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D73.04
liver, embryo E16.CNhs10523.462-17F56.27
liver, embryo E17.CNhs10510.481-18A34.84
liver, embryo E18.CNhs10579.499-43G46.90
liver, neonate N00.CNhs11117.641-24F49.24
liver, neonate N03.CNhs11123.1345-25G210.98
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H221.21
liver, neonate N10.CNhs11115.751-24B923.71
liver, neonate N20.CNhs11220.823-25A349.00
liver, neonate N25.CNhs11198.1368-26H125.12
liver, neonate N30.CNhs11106.1382-42D137.15
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H26.62
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E54.90
pancreas, embryo E17.CNhs10599.1558-45G35.32
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D86.77
pancreas, neonate N16.CNhs11136.787-43B611.69
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D43.13
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C64.59
stomach, neonate N03.CNhs11193.1340-24B82.83
stomach, neonate N07.CNhs11210.718-18A97.52
stomach, neonate N25.CNhs11104.1355-25E410.73
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.39
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
exocrine gland1.52e-1725
exocrine system1.52e-1725
liver2.82e-1722
epithelial sac2.82e-1722
digestive gland2.82e-1722
epithelium of foregut-midgut junction2.82e-1722
anatomical boundary2.82e-1722
hepatobiliary system2.82e-1722
foregut-midgut junction2.82e-1722
hepatic diverticulum2.82e-1722
liver primordium2.82e-1722
septum transversum2.82e-1722
liver bud2.82e-1722
digestive tract diverticulum4.10e-1623
sac4.10e-1623
abdomen element1.99e-1349
abdominal segment element1.99e-1349
abdominal segment of trunk1.99e-1349
abdomen1.99e-1349
trunk region element5.36e-1379
gastrointestinal system1.33e-1247
epithelial tube1.39e-1247
digestive system1.69e-11116
digestive tract1.69e-11116
primitive gut1.69e-11116
endoderm-derived structure5.82e-11118
endoderm5.82e-11118
presumptive endoderm5.82e-11118
subdivision of digestive tract1.48e-10114
intestine3.03e-1031
trunk7.13e-1090
mesenchyme3.25e-0861
entire embryonic mesenchyme3.25e-0861
pancreas3.90e-0812
subdivision of trunk7.58e-0866
gut epithelium2.19e-0755
endocrine system9.40e-0772
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