FFCP PHASE1:Mm9::chr1:39777805..39777820,-: Difference between revisions
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|id=chr1:39777805..39777820,-
|short_description=p2@Rfx8
|description=CAGE_peak_2_at_Rfx8_5end
|association_with_transcript=13bp_to_NM_001145660,uc007atn.2_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=619289 | |EntrezGene=619289 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=D3YU81 | |UniProt=D3YU81 | ||
|association_with_transcript=13bp_to_NM_001145660,uc007atn.2_5end | |||
|cluster_id=chr1:39777805..39777820,- | |||
|description=CAGE_peak_2_at_Rfx8_5end | |||
|id=chr1:39777805..39777820,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!7.60e-08!15;UBERON:0003101!3.48e-07!16;UBERON:0000079!3.48e-07!16;UBERON:0000473!6.44e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.28e-15,14;UBERON:0003135,5.35e-14,15;UBERON:0003101,3.50e-13,16;UBERON:0000079,3.50e-13,16;UBERON:0004176,1.84e-12,17;UBERON:0009196,1.84e-12,17;UBERON:0009117,1.84e-12,17;UBERON:0000991,8.03e-12,18;UBERON:0005564,8.03e-12,18;UBERON:0003133,4.35e-09,24;UBERON:0005156,1.87e-08,26;UBERON:0000990,1.87e-08,26 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.95303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.182975287204819,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0.11981512450592,0,0,0.299581278809645,0,0,0,0.255715457330331,0,0,0,0,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0,0.187403449119458,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0.232533944750408,0,0,0,0,0,0,0.439100230582101,0,0,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0.472905432318573,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0.370389054739423,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,36.0763480757882,0,0.165458490457098,0.194451188344048,0.387479470433193,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,12.5623742829523,17.2818003754719,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0.15241361331,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0.187283014939765,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.95303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.182975287204819,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0.11981512450592,0,0,0.299581278809645,0,0,0,0.255715457330331,0,0,0,0,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0,0.187403449119458,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0.232533944750408,0,0,0,0,0,0,0.439100230582101,0,0,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0.472905432318573,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0.370389054739423,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,36.0763480757882,0,0.165458490457098,0.194451188344048,0.387479470433193,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,12.5623742829523,17.2818003754719,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0.15241361331,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0.187283014939765,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0 | ||
|short_description=p2@Rfx8 | |||
}} | }} |
Latest revision as of 03:15, 27 September 2015
Short description: | p2@Rfx8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rfx8_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 13bp_to_NM_001145660, uc007atn.2_5end |
EntrezGene: | Rfx8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.28e-15 | 14 |
male reproductive organ | 5.35e-14 | 15 |
male organism | 3.50e-13 | 16 |
male reproductive system | 3.50e-13 | 16 |
external genitalia | 1.84e-12 | 17 |
indifferent external genitalia | 1.84e-12 | 17 |
indifferent gonad | 1.84e-12 | 17 |
gonad | 8.03e-12 | 18 |
gonad primordium | 8.03e-12 | 18 |
reproductive organ | 4.35e-09 | 24 |
reproductive structure | 1.87e-08 | 26 |
reproductive system | 1.87e-08 | 26 |