FFCP PHASE2:Hg19::chr2:70780951..70780966,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=7039 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11765 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 06:55, 18 September 2015
Short description: | p1@TGFA |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TGFA_5end |
Coexpression cluster: | C356_renal_Smooth_Chondrocyte_thyroid_serous_Small_mesenchymal |
Association with transcript: | 0bp_to_ENST00000418333, ENST00000460808_5end |
EntrezGene: | TGFA |
HGNC: | 11765 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@TGFA |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell | 4.32e-22 | 253 |
endo-epithelial cell | 6.85e-17 | 42 |
endodermal cell | 2.31e-16 | 58 |
respiratory epithelial cell | 6.67e-09 | 13 |
epithelial cell of alimentary canal | 6.69e-07 | 20 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
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anatomical conduit | 9.42e-12 | 240 |
adult organism | 1.54e-11 | 114 |
embryo | 6.86e-10 | 592 |
tube | 2.17e-09 | 192 |
endoderm-derived structure | 4.15e-09 | 160 |
endoderm | 4.15e-09 | 160 |
presumptive endoderm | 4.15e-09 | 160 |
neural tube | 7.00e-09 | 56 |
neural rod | 7.00e-09 | 56 |
future spinal cord | 7.00e-09 | 56 |
Showing 1 to 10 of 26 entries
Ontology term | p-value | n |
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carcinoma | 1.39e-13 | 106 |
squamous cell carcinoma | 1.27e-08 | 14 |
adenocarcinoma | 1.51e-08 | 25 |
cell type cancer | 2.95e-08 | 143 |
Showing 1 to 4 of 4 entries