FFCP PHASE1:Mm9::chr2:25098579..25098607,+: Difference between revisions
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|id=chr2:25098579..25098607,+
|short_description=p7@Rnf208
|description=CAGE_peak_7_at_Rnf208_5end
|association_with_transcript=130bp_to_ENSMUST00000114355,NM_17683...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=68846 | |EntrezGene=68846 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K0W3 | |UniProt=Q8K0W3 | ||
|association_with_transcript=130bp_to_ENSMUST00000114355,NM_176834,uc012bru.1_5end | |||
|cluster_id=chr2:25098579..25098607,+ | |||
|description=CAGE_peak_7_at_Rnf208_5end | |||
|id=chr2:25098579..25098607,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.46e-08!23;CL:0000337!4.46e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.29e-19,3;CL:0002614,3.86e-09,3;CL:0000117,9.11e-07,23;CL:0000337,9.11e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.23e-11!102;UBERON:0000924!2.23e-11!102;UBERON:0006601!2.23e-11!102;UBERON:0002346!4.86e-10!71;UBERON:0003075!4.86e-10!71;UBERON:0007284!4.86e-10!71;UBERON:0001049!2.29e-09!52;UBERON:0005068!2.29e-09!52;UBERON:0006241!2.29e-09!52;UBERON:0007135!2.29e-09!52;UBERON:0001017!2.77e-09!73;UBERON:0005743!2.77e-09!73;UBERON:0000033!6.17e-09!63;UBERON:0000955!8.40e-09!50;UBERON:0006238!8.40e-09!50;UBERON:0000073!9.54e-09!75;UBERON:0001016!9.54e-09!75;UBERON:0002616!3.86e-08!49;UBERON:0003076!9.35e-08!12;UBERON:0003057!9.35e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.29e-19,3;UBERON:0002275,1.29e-19,3;UBERON:0002038,3.86e-09,3;UBERON:0009663,3.86e-09,3;UBERON:0009661,3.86e-09,3;UBERON:0000125,3.86e-09,3;UBERON:0002308,3.86e-09,3;UBERON:0000073,1.52e-08,54;UBERON:0002420,1.49e-07,8;UBERON:0007245,1.49e-07,8;UBERON:0010009,1.49e-07,8;UBERON:0010011,1.49e-07,8;UBERON:0000454,1.49e-07,8;UBERON:0001017,1.56e-07,73;UBERON:0001016,2.67e-07,75;UBERON:0002950,4.54e-07,4;UBERON:0001891,4.54e-07,4;UBERON:0009616,4.54e-07,4;UBERON:0010286,4.54e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0.135005938331691,0.420649922702764,0.856952953211411,0.662605622854841,0,0,0,1.10115880999389,1.14918604276669,1.22885226604995,0.263772575460388,0.365950574409639,0,1.11673199600552,0,1.06958773443767,0.589257170947335,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0.608930956624282,0,0.150722640552623,0.352766121407114,0,0.247194967734374,0,0,0,0,0,0,0.585561594023094,20.9446706813455,0.255457055208591,0,0,0,0.449371918214468,0,1.13088916901578,0.695297280769106,0.767146371990992,0.20778804455956,0.162241263067758,0,0,0,0,0.130120442962704,0.229902104433473,0,0.30140963567143,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.411618449517138,0,0,0,0,0,0,0.22237804384487,0,0.949058123089023,0.164698954724011,0.502670417600539,0.198956472041151,1.16978452271472,0.898819408654221,0,0,0.379335801906163,0,0,0,0,0.280543279561274,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,1.40654023910644,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.963963949265421,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0.645857706783622,0.120625849856312,0.238744688006273,0.328281799490123,1.1659233465194,1.11255181206306,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0.655087691238533,0.269728692769641,0,1.04702376793612,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.524296722128554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0,0.167884616364078,0.386379188064381,0,0,0.643105137237198,0,0,0,0,0.68741272937475,0,0,0,0.45032120322422,0,1.03552062350364,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0.17230640686684,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.499621155875892,0.233931608445408,0.429742108096597,0.382576664137687,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0.135005938331691,0.420649922702764,0.856952953211411,0.662605622854841,0,0,0,1.10115880999389,1.14918604276669,1.22885226604995,0.263772575460388,0.365950574409639,0,1.11673199600552,0,1.06958773443767,0.589257170947335,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0.608930956624282,0,0.150722640552623,0.352766121407114,0,0.247194967734374,0,0,0,0,0,0,0.585561594023094,20.9446706813455,0.255457055208591,0,0,0,0.449371918214468,0,1.13088916901578,0.695297280769106,0.767146371990992,0.20778804455956,0.162241263067758,0,0,0,0,0.130120442962704,0.229902104433473,0,0.30140963567143,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.411618449517138,0,0,0,0,0,0,0.22237804384487,0,0.949058123089023,0.164698954724011,0.502670417600539,0.198956472041151,1.16978452271472,0.898819408654221,0,0,0.379335801906163,0,0,0,0,0.280543279561274,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,1.40654023910644,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.963963949265421,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0.645857706783622,0.120625849856312,0.238744688006273,0.328281799490123,1.1659233465194,1.11255181206306,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0.655087691238533,0.269728692769641,0,1.04702376793612,0,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.524296722128554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0,0.167884616364078,0.386379188064381,0,0,0.643105137237198,0,0,0,0,0.68741272937475,0,0,0,0.45032120322422,0,1.03552062350364,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0.17230640686684,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.499621155875892,0.233931608445408,0.429742108096597,0.382576664137687,0,0 | ||
|short_description=p7@Rnf208 | |||
}} | }} |
Latest revision as of 10:03, 26 September 2015
Short description: | p7@Rnf208 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Rnf208_5end |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | 130bp_to_ENSMUST00000114355, NM_176834, uc012bru.1_5end |
EntrezGene: | Rnf208 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.29e-19 | 3 |
neuron of the substantia nigra | 3.86e-09 | 3 |
CNS neuron (sensu Vertebrata) | 9.11e-07 | 23 |
neuroblast (sensu Vertebrata) | 9.11e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.29e-19 | 3 |
reticular formation | 1.29e-19 | 3 |
substantia nigra | 3.86e-09 | 3 |
telencephalic nucleus | 3.86e-09 | 3 |
midbrain nucleus | 3.86e-09 | 3 |
neural nucleus | 3.86e-09 | 3 |
nucleus of brain | 3.86e-09 | 3 |
regional part of nervous system | 1.52e-08 | 54 |
basal ganglion | 1.49e-07 | 8 |
nuclear complex of neuraxis | 1.49e-07 | 8 |
aggregate regional part of brain | 1.49e-07 | 8 |
collection of basal ganglia | 1.49e-07 | 8 |
cerebral subcortex | 1.49e-07 | 8 |
central nervous system | 1.56e-07 | 73 |
nervous system | 2.67e-07 | 75 |
regional part of midbrain | 4.54e-07 | 4 |
midbrain | 4.54e-07 | 4 |
presumptive midbrain | 4.54e-07 | 4 |
midbrain neural tube | 4.54e-07 | 4 |