FFCP PHASE1:Mm9::chr3:138106049..138106140,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:138106049..138106140,+
|short_description=p1@Adh5
|description=CAGE_peak_1_at_Adh5_5end
|association_with_transcript=0bp_to_ENSMUST00000005964,ENSMUST00000...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=11532 | |EntrezGene=11532 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=P28474,Q6P5I3 | |UniProt=P28474,Q6P5I3 | ||
|association_with_transcript=0bp_to_ENSMUST00000005964,ENSMUST00000160201,ENSMUST00000160625,ENSMUST00000162024,NM_007410,uc008rnk.1_5end | |||
|cluster_id=chr3:138106049..138106140,+ | |||
|description=CAGE_peak_1_at_Adh5_5end | |||
|id=chr3:138106049..138106140,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!3.43e-11!49;UBERON:0005173!3.43e-11!49;UBERON:0002417!3.43e-11!49;UBERON:0000916!3.43e-11!49;UBERON:0003914!2.18e-10!47;UBERON:0005256!9.39e-10!47;UBERON:0009854!1.77e-09!23;UBERON:0009856!1.77e-09!23;UBERON:0002107!5.36e-09!22;UBERON:0007499!5.36e-09!22;UBERON:0006925!5.36e-09!22;UBERON:0009497!5.36e-09!22;UBERON:0000015!5.36e-09!22;UBERON:0002423!5.36e-09!22;UBERON:0006235!5.36e-09!22;UBERON:0008835!5.36e-09!22;UBERON:0003894!5.36e-09!22;UBERON:0004161!5.36e-09!22;UBERON:0008836!5.36e-09!22;UBERON:0009569!9.38e-09!66;UBERON:0002365!2.57e-07!25;UBERON:0002330!2.57e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,3.43e-11,49;UBERON:0005173,3.43e-11,49;UBERON:0002417,3.43e-11,49;UBERON:0000916,3.43e-11,49;UBERON:0003104,1.67e-10,61;UBERON:0009142,1.67e-10,61;UBERON:0003914,2.18e-10,47;UBERON:0009854,1.77e-09,23;UBERON:0009856,1.77e-09,23;UBERON:0005256,2.20e-09,45;UBERON:0002107,5.36e-09,22;UBERON:0007499,5.36e-09,22;UBERON:0006925,5.36e-09,22;UBERON:0009497,5.36e-09,22;UBERON:0000015,5.36e-09,22;UBERON:0002423,5.36e-09,22;UBERON:0006235,5.36e-09,22;UBERON:0008835,5.36e-09,22;UBERON:0003894,5.36e-09,22;UBERON:0004161,5.36e-09,22;UBERON:0008836,5.36e-09,22;UBERON:0009569,9.38e-09,66;UBERON:0002365,2.57e-07,25;UBERON:0002330,2.57e-07,25;UBERON:0005177,7.97e-07,79 | |||
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|phase1_expression=116.58836069229,65.6073766361999,60.5148988388083,83.7825865319919,64.1146534331324,70.6771734749056,84.8013885361758,89.2242164981292,53.640503139785,75.8369065283259,147.41867064216,134.575632225133,97.9268175206497,104.729642097959,46.3022568923771,66.6143629712527,34.9780939064073,90.5376414578142,81.9944312962318,86.9998786185962,60.2106494269574,129.078236561151,169.25746336203,119.514339826675,117.457551906391,90.1544183660582,96.9214491357918,92.8681012876182,72.7789696517912,60.2352010126234,70.9537634096975,39.3719017544971,39.3641464054125,15.8481681015439,135.471409663348,165.071002840983,137.814315477099,76.5912884248541,79.6962051414276,82.7167515478601,59.9996117791635,53.2775478267588,83.5077807213584,128.288857517113,117.394486352198,125.178884974267,25.0365230191373,57.122590971677,61.9515035311211,109.85289297697,67.193482380174,61.8136026769378,71.307607574538,72.5362142011344,64.1939156362106,75.8915336306044,75.0717612639543,68.5843882728998,71.2153942225784,67.1818543675482,79.2289254382724,42.0167219765724,47.1326241938904,26.0970918011606,22.7439263390404,28.419204597844,22.1704081783619,14.9845139075406,95.083374486874,90.318972743901,103.900530907583,43.9902515981858,55.8797408607582,95.910295785309,104.279872467841,84.5681283681219,23.1243350098716,40.8599481872601,41.012944379417,74.6476388552897,77.947472349253,71.8860451368329,40.4815348552002,37.1423322620909,39.8803426697474,38.8909732825241,59.3689908932259,67.6629988345841,84.5104317598334,75.1181307461448,73.0458511528228,751.15004460475,435.18165357296,492.749013965327,545.162414238594,546.592802258749,224.149294530276,73.4554690311429,77.156443367052,72.0812732001094,107.463529289607,51.3305909657271,12.7402619853323,14.2213340630666,94.1736028398781,87.409153588909,86.9502045425427,281.234895748045,48.6803221256683,142.801337780361,159.433015298079,228.349108734106,215.394874437159,274.616651086878,211.07172930859,149.668910273643,148.06978567289,101.219549843938,43.3459170455438,55.9713300818036,51.2352322828113,44.1236480353052,167.75258509631,52.99332425909,54.8750371851252,67.6961196302767,90.8198643754876,171.572181064115,114.236134138685,67.7053690109799,53.5275705297793,100.397827338179,59.4479175057586,54.7231078686907,65.661022080821,65.7077115424418,90.1278370075299,78.6252054255788,227.703205348741,103.958276807918,142.612005487123,156.793235223629,116.860322243672,113.179318194622,85.3177699357651,103.259658549589,93.4206193860496,73.4717572898804,118.131260127198,93.0401914425671,84.6324907228594,112.885802200201,88.9751197521913,56.0685988100688,68.1138871510293,121.410902759281,180.468789139501,162.6438772965,99.4572247884574,102.320131632538,120.780920890265,119.921332933036,90.6732337291355,113.532961718252,118.939944036169,129.986475115478,106.504540355649,114.313270177459,101.368867546704,110.977205717468,93.0669933586424,105.263990946239,108.896857184361,103.607355283007,60.7737951350328,127.087196288416,68.72710686063,89.6487420989415,133.945021336127,106.828869055802,94.7175840717386,107.295635099618,116.748473018557,121.363949459813,72.1284173547658,111.501192348155,89.4753343328959,90.1272818346413,83.0547011127452,68.3102750577208,90.5618428974969,88.2195840516847,176.01181208446,115.619494761046,102.564039462503,139.908462229731,128.784451479303,125.823660883231,124.702451209035,170.932551360379,164.377668049919,202.618143159596,648.934800693769,65.4032814407089,76.6580080941492,78.2520151099291,101.024340451474,193.665259281191,326.43034198378,321.644281670006,276.440561651435,313.274572447601,230.029130443767,365.44241061047,376.31743377616,482.930814634878,547.341508655354,557.704710696052,69.2824463124768,161.825665651994,133.305350729577,125.271873302089,118.518575385694,87.6057726420696,110.928336652882,56.7838915266195,75.3495988827593,74.4121357219884,62.3468145450775,67.8394122923155,66.8290879821016,67.5511103575659,69.3639906120652,69.0760218449761,75.2399337719125,83.3328973840292,84.2890597435908,73.7261508664958,76.5576194909074,94.6765977016399,99.7005973355371,90.5817886768201,64.1961725243741,92.7198936055902,74.4147571435196,60.5783775888101,80.1525189316291,83.5851753626352,69.9659366965347,54.3033024752854,100.919400583079,121.97493851207,98.38372344956,118.778488540226,54.4255067193848,119.933634260561,131.510747279667,110.522576736956,83.5704356852587,86.6967117201876,71.326208914429,68.344341141771,81.2814022717165,67.9479029562004,56.9260486304993,63.9440368138758,63.6622062759584,114.338794709882,127.159586158448,98.1663620444693,87.2513949519986,89.3627776186374,90.6665103517687,66.068893957868,74.6256031642599,65.6679419677843,95.7093247558535,38.2536106824234,68.9453101991517,49.6978501408004,47.6295652572514,38.7372523398345,84.2379617860269,68.6073617438886,52.6282312857386,79.4589441658407,64.4476955246597,43.889850482093,43.7421528707281,46.2131909877176,114.565461815858,113.360676382163,91.3501826847241,62.0535901709824,115.937141647486,85.80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| ||
|short_description=p1@Adh5 | |||
}} | }} |
Latest revision as of 16:51, 1 October 2015
Short description: | p1@Adh5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Adh5_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000005964, ENSMUST00000160201, ENSMUST00000160625, ENSMUST00000162024, NM_007410, uc008rnk.1_5end |
EntrezGene: | Adh5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 3.43e-11 | 49 |
abdominal segment element | 3.43e-11 | 49 |
abdominal segment of trunk | 3.43e-11 | 49 |
abdomen | 3.43e-11 | 49 |
mesenchyme | 1.67e-10 | 61 |
entire embryonic mesenchyme | 1.67e-10 | 61 |
epithelial tube | 2.18e-10 | 47 |
digestive tract diverticulum | 1.77e-09 | 23 |
sac | 1.77e-09 | 23 |
trunk mesenchyme | 2.20e-09 | 45 |
liver | 5.36e-09 | 22 |
epithelial sac | 5.36e-09 | 22 |
digestive gland | 5.36e-09 | 22 |
epithelium of foregut-midgut junction | 5.36e-09 | 22 |
anatomical boundary | 5.36e-09 | 22 |
hepatobiliary system | 5.36e-09 | 22 |
foregut-midgut junction | 5.36e-09 | 22 |
hepatic diverticulum | 5.36e-09 | 22 |
liver primordium | 5.36e-09 | 22 |
septum transversum | 5.36e-09 | 22 |
liver bud | 5.36e-09 | 22 |
subdivision of trunk | 9.38e-09 | 66 |
exocrine gland | 2.57e-07 | 25 |
exocrine system | 2.57e-07 | 25 |
trunk region element | 7.97e-07 | 79 |