FFCP PHASE2:Hg19::chr9:19380220..19380245,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6194 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:10429 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6194 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=10429 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=A2A3R7,A2A3R6,P62753 | ||
|association_with_transcript=0bp_to_ENST00000380381,NM_001010,uc003znv.1_5end | |association_with_transcript=0bp_to_ENST00000380381,NM_001010,uc003znv.1_5end | ||
|cluster_id=chr9:19380220..19380245,- | |cluster_id=chr9:19380220..19380245,- | ||
Latest revision as of 21:13, 16 September 2015
| Short description: | p1@RPS6 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_RPS6_5end |
| Coexpression cluster: | C527_CD4_CD8_CD19_CD34_CD133_skeletal_Mesenchymal |
| Association with transcript: | 0bp_to_ENST00000380381, NM_001010, uc003znv.1_5end |
| EntrezGene: | RPS6 |
| HGNC: | 10429 |
| UniProt: | A2A3R7A2A3R6P62753 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@RPS6 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphoid lineage restricted progenitor cell | 8.58e-24 | 52 |
| lymphocyte | 1.19e-23 | 53 |
| common lymphoid progenitor | 1.19e-23 | 53 |
| lymphocyte of B lineage | 1.16e-12 | 24 |
| pro-B cell | 1.16e-12 | 24 |
| T cell | 3.44e-11 | 25 |
| pro-T cell | 3.44e-11 | 25 |
| mature alpha-beta T cell | 2.45e-10 | 18 |
| alpha-beta T cell | 2.45e-10 | 18 |
| immature T cell | 2.45e-10 | 18 |
Showing 1 to 10 of 17 entries
