FFCP PHASE1:Mm9::chr4:84851040..84851053,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:84851040..84851053,+
|short_description=p4@Sh3gl2
|description=CAGE_peak_4_at_Sh3gl2_5end
|association_with_transcript=10bp_to_ENSMUST00000107188_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20404 | |EntrezGene=20404 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=95 | |||
|TSSclassifier=NA | |||
|UniProt=A2ALV3 | |UniProt=A2ALV3 | ||
|association_with_transcript=10bp_to_ENSMUST00000107188_5end | |||
|cluster_id=chr4:84851040..84851053,+ | |||
|description=CAGE_peak_4_at_Sh3gl2_5end | |||
|id=chr4:84851040..84851053,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.69e-08,3;CL:0002614,2.37e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.45e-12!63;UBERON:0002346!1.04e-11!71;UBERON:0003075!1.04e-11!71;UBERON:0007284!1.04e-11!71;UBERON:0000955!1.39e-11!50;UBERON:0006238!1.39e-11!50;UBERON:0001049!6.40e-11!52;UBERON:0005068!6.40e-11!52;UBERON:0006241!6.40e-11!52;UBERON:0007135!6.40e-11!52;UBERON:0002616!7.35e-11!49;UBERON:0003056!2.06e-09!49;UBERON:0004121!1.21e-08!102;UBERON:0000924!1.21e-08!102;UBERON:0006601!1.21e-08!102;UBERON:0003080!1.88e-08!40;UBERON:0002780!8.24e-08!39;UBERON:0001890!8.24e-08!39;UBERON:0006240!8.24e-08!39;UBERON:0001017!1.22e-07!73;UBERON:0005743!1.22e-07!73;UBERON:0000073!3.95e-07!75;UBERON:0001016!3.95e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002950,6.87e-13,4;UBERON:0001891,6.87e-13,4;UBERON:0009616,6.87e-13,4;UBERON:0010286,6.87e-13,4;UBERON:0000955,1.80e-10,47;UBERON:0006238,1.80e-10,47;UBERON:0002616,1.27e-08,46;UBERON:0002038,2.37e-08,3;UBERON:0009663,2.37e-08,3;UBERON:0009661,2.37e-08,3;UBERON:0000125,2.37e-08,3;UBERON:0002308,2.37e-08,3;UBERON:0001049,1.69e-07,52;UBERON:0005068,1.69e-07,52;UBERON:0006241,1.69e-07,52;UBERON:0007135,1.69e-07,52;UBERON:0001255,2.75e-07,1;UBERON:0001556,2.75e-07,1;UBERON:0000073,3.53e-07,54;UBERON:0002037,8.46e-07,4;UBERON:0002680,8.46e-07,4;UBERON:0001895,8.46e-07,4;UBERON:0010092,8.46e-07,4;UBERON:0006215,8.46e-07,4 | |||
|phase1_expression=0.160148847104794,0.697950815278722,0,0.90739263392049,0.500895729946347,0.839396359559449,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.639969691173627,0.22940928106717,0,1.29228598847722,1.29282739611533,0.380046838912748,0.504060259519861,0.443461021310609,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.420649922702764,0.856952953211411,0.220868540951614,0.244981598429908,0,0.919218786610021,0,0.510749352340751,0.307213066512487,0.131886287730194,0.365950574409639,0.52091337055676,1.3959149950069,1.12552522006336,0.45839474333043,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0.29688427812965,0,0,0.461230994512117,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,1.75668478206928,1.8850203613211,0.255457055208591,0,0,0,1.04853447583376,0,0.125654352112864,0.347648640384553,0.767146371990992,1.0389402227978,0.162241263067758,0,0,1.51633655060205,0.420883711772948,0,0.229902104433473,0,0,0.136072998302656,0.12811372028485,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.823236899034275,0.991256348951394,0,0,0.232236671860439,0.38660238396628,0.201683524623343,0,0.380451252225118,0,0.164698954724011,0,0,0.38992817423824,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.420814919341911,0.316182685621286,0.147610147979602,0.470996183524124,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0.214337035031592,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0.241251699712623,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0.269728692769641,0.247960367176008,0.26175594198403,0.777689839750757,0,1.12738587736838,0,0.165458490457098,0,0,0,0,0.5208175393758,1.04859344425711,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,9.07991091951295,0,0.36630324853453,0.428736758158132,0,1.12950368523413,0,1.14579102687879,0.343706364687375,0,0,0,0,0.906284817968409,0.51776031175182,0,0,0,0.243106717068294,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0.160148847104794,0.697950815278722,0,0.90739263392049,0.500895729946347,0.839396359559449,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.639969691173627,0.22940928106717,0,1.29228598847722,1.29282739611533,0.380046838912748,0.504060259519861,0.443461021310609,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.420649922702764,0.856952953211411,0.220868540951614,0.244981598429908,0,0.919218786610021,0,0.510749352340751,0.307213066512487,0.131886287730194,0.365950574409639,0.52091337055676,1.3959149950069,1.12552522006336,0.45839474333043,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0.29688427812965,0,0,0.461230994512117,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,1.75668478206928,1.8850203613211,0.255457055208591,0,0,0,1.04853447583376,0,0.125654352112864,0.347648640384553,0.767146371990992,1.0389402227978,0.162241263067758,0,0,1.51633655060205,0.420883711772948,0,0.229902104433473,0,0,0.136072998302656,0.12811372028485,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.823236899034275,0.991256348951394,0,0,0.232236671860439,0.38660238396628,0.201683524623343,0,0.380451252225118,0,0.164698954724011,0,0,0.38992817423824,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.420814919341911,0.316182685621286,0.147610147979602,0.470996183524124,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0.214337035031592,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0.241251699712623,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0.269728692769641,0.247960367176008,0.26175594198403,0.777689839750757,0,1.12738587736838,0,0.165458490457098,0,0,0,0,0.5208175393758,1.04859344425711,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,9.07991091951295,0,0.36630324853453,0.428736758158132,0,1.12950368523413,0,1.14579102687879,0.343706364687375,0,0,0,0,0.906284817968409,0.51776031175182,0,0,0,0.243106717068294,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p4@Sh3gl2 | |||
}} | }} |
Latest revision as of 06:12, 27 September 2015
Short description: | p4@Sh3gl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sh3gl2_5end |
Coexpression cluster: | MCL_coexpression_mm9:95 |
Association with transcript: | 10bp_to_ENSMUST00000107188_5end |
EntrezGene: | Sh3gl2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.69e-08 | 3 |
neuron of the substantia nigra | 2.37e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of midbrain | 6.87e-13 | 4 |
midbrain | 6.87e-13 | 4 |
presumptive midbrain | 6.87e-13 | 4 |
midbrain neural tube | 6.87e-13 | 4 |
brain | 1.80e-10 | 47 |
future brain | 1.80e-10 | 47 |
regional part of brain | 1.27e-08 | 46 |
substantia nigra | 2.37e-08 | 3 |
telencephalic nucleus | 2.37e-08 | 3 |
midbrain nucleus | 2.37e-08 | 3 |
neural nucleus | 2.37e-08 | 3 |
nucleus of brain | 2.37e-08 | 3 |
neural tube | 1.69e-07 | 52 |
neural rod | 1.69e-07 | 52 |
future spinal cord | 1.69e-07 | 52 |
neural keel | 1.69e-07 | 52 |
urinary bladder | 2.75e-07 | 1 |
lower urinary tract | 2.75e-07 | 1 |
regional part of nervous system | 3.53e-07 | 54 |
cerebellum | 8.46e-07 | 4 |
regional part of metencephalon | 8.46e-07 | 4 |
metencephalon | 8.46e-07 | 4 |
future metencephalon | 8.46e-07 | 4 |
rhombic lip | 8.46e-07 | 4 |