Personal tools

FFCP PHASE1:Mm9::chr5:108561822..108561903,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr5:108561822..108561903,+ |short_description=p1@Ccdc18 |description=CAGE_peak_1_at_Ccdc18_5end |association_with_transcript=0bp_to_uc012eaq.1_5end |EntrezGen...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr5:108561822..108561903,+
|DHSsupport=NA
|short_description=p1@Ccdc18
|DPIdataset=NA
|description=CAGE_peak_1_at_Ccdc18_5end
|association_with_transcript=0bp_to_uc012eaq.1_5end
|EntrezGene=73254
|EntrezGene=73254
|HGNC=
|HGNC=
|MCL_coexpression_id=49
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_uc012eaq.1_5end
|cluster_id=chr5:108561822..108561903,+
|description=CAGE_peak_1_at_Ccdc18_5end
|id=chr5:108561822..108561903,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=1.92178616525753,0.348975407639361,0.454999239389536,0.30246421130683,1.00179145989269,4.8684988854448,4.67225281191051,1.03298658753261,0.140788722151667,1.17032263160997,0,0,0.342401459862411,0.524522414513984,13.3243904726265,13.970793449898,21.6864182219725,1.57731082679119,3.56497527374921,2.12194825899015,4.76242424845991,8.24114894967348,9.14199261986274,1.27993938234725,1.83527424853736,1.14846392823004,0.86152399231815,1.29282739611533,2.09025761402011,2.52030129759931,3.10422714917427,8.89042942843484,7.99584223859941,0,12.7094712690561,7.48055904113216,10.4126371693808,4.18531630736908,7.813353445238,6.28228492768558,5.29408339227913,6.83045484958446,4.36959317728038,0.755380907853464,1.01376931219515,0.550640256485045,2.34717403304412,2.39827672018491,1.5378032791413,1.1665793944457,1.67983705950435,1.43752564364972,2.34895648480831,1.45072428402269,0.672187598284928,0.257259436035947,1.14613375975503,0.515672092277442,1.01158230429799,0.528990979272033,1.26766280701236,1.35537812827653,2.66788438833342,0.449949858640699,0,1.4209602298922,0.898800331555214,0,2.38486108309499,1.35005938331691,2.3135745748652,1.99955689082663,0.883474163806454,3.42974237801871,2.49198224647415,3.67687514644008,0,0.383062014255563,0,0.659431438650969,0.823388792421687,0.52091337055676,0.279182999001381,0,0.61119299110724,1.76777151284201,1.70846016958924,0.186399445825301,0.302904773332736,3.09843396437821,1.73918693221007,0,0,0,0,0.448026887097336,1.40444420131752,2.04516387093669,1.81850203222008,1.06001872353102,1.26759077799012,2.56652954828636,5.09610479413291,7.11066703153331,2.16491041011214,2.02687892380079,3.0331466700887,3.08296475241462,4.66088190564909,0.445326417194474,3.29622120855658,1.82679286987285,2.53677046981664,2.11011696773672,2.70454026412121,1.50799909595611,0.741584903203122,1.44599356919912,9.73071607144862,4.04417124868523,5.07935492458905,8.24287930329878,3.72783522436244,0.585561594023094,1.04723353406728,2.55457055208591,5.39168060276641,7.19883277192089,3.68503658511888,0.449371918214468,0.915001205637253,1.38219787324151,0.173824320192276,0.767146371990992,0,0.973447578406546,5.80484373946803,4.60305791257344,2.77995034277042,1.05220927943237,10.4096354370163,6.43725892413724,8.46292010085141,9.79581315932148,9.79725587779121,8.19927809823039,7.02762934197966,0.776110112217047,3.88022387279116,9.8335161687266,5.98233822157426,3.5071317188412,5.00485048606076,4.87553033131033,5.14455341019859,8.35943920637671,6.31991868581911,5.40430604940902,7.10408748488982,4.14251545071004,3.28336483973535,3.6012412292203,4.02466050494857,2.75469924446365,3.5481435964097,3.0229412817553,2.68273401399619,3.50296027101508,1.48103864922132,1.80584210487005,0.891756905004413,0,0.878200461164203,1.47627060636409,1.89260953707715,3.2929475961371,0.330418782983798,3.96675849995316,6.18535926552179,6.96710015581316,7.98978260196979,7.26060688644033,6.67134131534611,3.80451252225118,1.42358718463353,1.97638745668813,5.02670417600539,5.96869416123452,5.45899443933536,6.29173586057955,5.18731319699266,3.38540164532424,2.46568271239006,8.68288695833939,6.76246414038483,5.90588850751411,6.20647958936402,5.89140887078676,4.17361145020098,1.32849133181642,1.72698600625512,1.85095745882701,0,8.17541018008861,8.84515478009414,10.5685192820881,11.9687471619217,10.6117950291063,6.11102044275408,8.0554918486227,5.18832725680113,7.13859674289012,15.814502718009,3.34926852901653,2.49630138491648,4.04126204715379,3.58794827043824,0.964887042726734,1.10851914099963,7.01118223550794,8.47417877498535,11.0334305753872,14.5507953938871,9.71536293162531,3.80869825417622,3.90267295715598,6.77831119656621,3.10050565508285,5.10255259703959,0.81931657357869,1.89953480052485,2.4590339958857,1.50791283939272,1.08781136763742,0.983528546038072,3.31124095565679,0.321101179975584,0.820481806145422,1.96721934452011,1.76729649043061,5.04813151066011,5.85658116444958,6.89354872744957,2.15071918157297,2.45078541490634,3.11384183867716,5.66734982344852,4.67609372658099,2.76701444562566,0.642642632843614,3.97432238583152,3.38324646967785,6.67836533349662,1.97964147567043,0,5.82673526771955,4.83717691143602,3.77210159511796,2.06711325016541,1.22974059177571,2.84271122485043,6.5436071305951,6.77345018930971,3.47640433729398,0,0,2.04263763452273,7.56256594931503,1.81102157295856,4.07240366560025,4.78818630834139,3.0322698992352,3.78462747384878,0.304464949114599,2.58138878870081,0.63549621259146,0.220528398054962,6.76033637060068,4.84393280087717,7.84068024066026,7.04296829618505,8.53532678674319,4.66369338607761,0.18542530201051,8.37267315909478,6.3979929068599,8.70414278637645,16.5764242164128,15.8565304156389,12.3540213531522,4.24946074984638,5.17820373597535,4.00779924032829,0,6.01038387804157,8.74273708645449,7.23635783506068,8.36353184057875,4.36725127492355,5.39457385539283,3.88471241909079,1.57053565190418,2.85152941241944,1.24267862617385,11.837551712368,8.07389348637486,5.29467169462712,6.80579159204167,3.7456348808542,7.94093789806657,5.51579021635044,8.85389816938861,9.12276296503684,20.7762343910365,18.1458903942455,9.16432249821717,9.52808511863772,16.0229093177131,28.8424227010705,24.16860391511,16.8879151564075,17.4283401803955,13.7351260272357,19.8903906397851,23.5479032563949,16.6363205475787,14.4237663494834,15.3938946624527,15.7783817945118,1.81384306892169,4.21773311410723,6.2799699626633,8.22634620183984,0.772758376128762,1.31377732815827,1.64836461840539,2.57242054894879,1.00314420807073,0,1.84130094602871,1.71868654031819,1.3748254587495,0.685082519770642,0,0.675022500231806,0.900642406448441,0.906284817968409,1.03552062350364,4.98179268404048,6.78342284781753,5.29274177837816,9.23805524859517,5.44994222832754,2.75765262675021,5.55616819504038,3.7086310303001,4.1719497246936,4.80124702351215,4.81610669791456,6.41329560712659,4.49479235855436,5.12201219238954,5.74354689556133,3.81034953026459,5.67833197129792,3.8581844092741,7.41754621445952,6.77115032618228,5.14303878578123,5.14679837862079,6.67621331852499,6.39524233182245,5.27012530325851,4.99226186560891,3.10977553883713,5.26139422875686,4.88894809845102,2.80571135828869,5.81311588808453,4.92522411877817,4.50154147486658,6.04253680625267,5.78719832943424,1.74867404556562,4.21076895201735,2.79332370262788,1.53030665655075,4.63241980150983,2.55054619182464
|phase1_expression=1.92178616525753,0.348975407639361,0.454999239389536,0.30246421130683,1.00179145989269,4.8684988854448,4.67225281191051,1.03298658753261,0.140788722151667,1.17032263160997,0,0,0.342401459862411,0.524522414513984,13.3243904726265,13.970793449898,21.6864182219725,1.57731082679119,3.56497527374921,2.12194825899015,4.76242424845991,8.24114894967348,9.14199261986274,1.27993938234725,1.83527424853736,1.14846392823004,0.86152399231815,1.29282739611533,2.09025761402011,2.52030129759931,3.10422714917427,8.89042942843484,7.99584223859941,0,12.7094712690561,7.48055904113216,10.4126371693808,4.18531630736908,7.813353445238,6.28228492768558,5.29408339227913,6.83045484958446,4.36959317728038,0.755380907853464,1.01376931219515,0.550640256485045,2.34717403304412,2.39827672018491,1.5378032791413,1.1665793944457,1.67983705950435,1.43752564364972,2.34895648480831,1.45072428402269,0.672187598284928,0.257259436035947,1.14613375975503,0.515672092277442,1.01158230429799,0.528990979272033,1.26766280701236,1.35537812827653,2.66788438833342,0.449949858640699,0,1.4209602298922,0.898800331555214,0,2.38486108309499,1.35005938331691,2.3135745748652,1.99955689082663,0.883474163806454,3.42974237801871,2.49198224647415,3.67687514644008,0,0.383062014255563,0,0.659431438650969,0.823388792421687,0.52091337055676,0.279182999001381,0,0.61119299110724,1.76777151284201,1.70846016958924,0.186399445825301,0.302904773332736,3.09843396437821,1.73918693221007,0,0,0,0,0.448026887097336,1.40444420131752,2.04516387093669,1.81850203222008,1.06001872353102,1.26759077799012,2.56652954828636,5.09610479413291,7.11066703153331,2.16491041011214,2.02687892380079,3.0331466700887,3.08296475241462,4.66088190564909,0.445326417194474,3.29622120855658,1.82679286987285,2.53677046981664,2.11011696773672,2.70454026412121,1.50799909595611,0.741584903203122,1.44599356919912,9.73071607144862,4.04417124868523,5.07935492458905,8.24287930329878,3.72783522436244,0.585561594023094,1.04723353406728,2.55457055208591,5.39168060276641,7.19883277192089,3.68503658511888,0.449371918214468,0.915001205637253,1.38219787324151,0.173824320192276,0.767146371990992,0,0.973447578406546,5.80484373946803,4.60305791257344,2.77995034277042,1.05220927943237,10.4096354370163,6.43725892413724,8.46292010085141,9.79581315932148,9.79725587779121,8.19927809823039,7.02762934197966,0.776110112217047,3.88022387279116,9.8335161687266,5.98233822157426,3.5071317188412,5.00485048606076,4.87553033131033,5.14455341019859,8.35943920637671,6.31991868581911,5.40430604940902,7.10408748488982,4.14251545071004,3.28336483973535,3.6012412292203,4.02466050494857,2.75469924446365,3.5481435964097,3.0229412817553,2.68273401399619,3.50296027101508,1.48103864922132,1.80584210487005,0.891756905004413,0,0.878200461164203,1.47627060636409,1.89260953707715,3.2929475961371,0.330418782983798,3.96675849995316,6.18535926552179,6.96710015581316,7.98978260196979,7.26060688644033,6.67134131534611,3.80451252225118,1.42358718463353,1.97638745668813,5.02670417600539,5.96869416123452,5.45899443933536,6.29173586057955,5.18731319699266,3.38540164532424,2.46568271239006,8.68288695833939,6.76246414038483,5.90588850751411,6.20647958936402,5.89140887078676,4.17361145020098,1.32849133181642,1.72698600625512,1.85095745882701,0,8.17541018008861,8.84515478009414,10.5685192820881,11.9687471619217,10.6117950291063,6.11102044275408,8.0554918486227,5.18832725680113,7.13859674289012,15.814502718009,3.34926852901653,2.49630138491648,4.04126204715379,3.58794827043824,0.964887042726734,1.10851914099963,7.01118223550794,8.47417877498535,11.0334305753872,14.5507953938871,9.71536293162531,3.80869825417622,3.90267295715598,6.77831119656621,3.10050565508285,5.10255259703959,0.81931657357869,1.89953480052485,2.4590339958857,1.50791283939272,1.08781136763742,0.983528546038072,3.31124095565679,0.321101179975584,0.820481806145422,1.96721934452011,1.76729649043061,5.04813151066011,5.85658116444958,6.89354872744957,2.15071918157297,2.45078541490634,3.11384183867716,5.66734982344852,4.67609372658099,2.76701444562566,0.642642632843614,3.97432238583152,3.38324646967785,6.67836533349662,1.97964147567043,0,5.82673526771955,4.83717691143602,3.77210159511796,2.06711325016541,1.22974059177571,2.84271122485043,6.5436071305951,6.77345018930971,3.47640433729398,0,0,2.04263763452273,7.56256594931503,1.81102157295856,4.07240366560025,4.78818630834139,3.0322698992352,3.78462747384878,0.304464949114599,2.58138878870081,0.63549621259146,0.220528398054962,6.76033637060068,4.84393280087717,7.84068024066026,7.04296829618505,8.53532678674319,4.66369338607761,0.18542530201051,8.37267315909478,6.3979929068599,8.70414278637645,16.5764242164128,15.8565304156389,12.3540213531522,4.24946074984638,5.17820373597535,4.00779924032829,0,6.01038387804157,8.74273708645449,7.23635783506068,8.36353184057875,4.36725127492355,5.39457385539283,3.88471241909079,1.57053565190418,2.85152941241944,1.24267862617385,11.837551712368,8.07389348637486,5.29467169462712,6.80579159204167,3.7456348808542,7.94093789806657,5.51579021635044,8.85389816938861,9.12276296503684,20.7762343910365,18.1458903942455,9.16432249821717,9.52808511863772,16.0229093177131,28.8424227010705,24.16860391511,16.8879151564075,17.4283401803955,13.7351260272357,19.8903906397851,23.5479032563949,16.6363205475787,14.4237663494834,15.3938946624527,15.7783817945118,1.81384306892169,4.21773311410723,6.2799699626633,8.22634620183984,0.772758376128762,1.31377732815827,1.64836461840539,2.57242054894879,1.00314420807073,0,1.84130094602871,1.71868654031819,1.3748254587495,0.685082519770642,0,0.675022500231806,0.900642406448441,0.906284817968409,1.03552062350364,4.98179268404048,6.78342284781753,5.29274177837816,9.23805524859517,5.44994222832754,2.75765262675021,5.55616819504038,3.7086310303001,4.1719497246936,4.80124702351215,4.81610669791456,6.41329560712659,4.49479235855436,5.12201219238954,5.74354689556133,3.81034953026459,5.67833197129792,3.8581844092741,7.41754621445952,6.77115032618228,5.14303878578123,5.14679837862079,6.67621331852499,6.39524233182245,5.27012530325851,4.99226186560891,3.10977553883713,5.26139422875686,4.88894809845102,2.80571135828869,5.81311588808453,4.92522411877817,4.50154147486658,6.04253680625267,5.78719832943424,1.74867404556562,4.21076895201735,2.79332370262788,1.53030665655075,4.63241980150983,2.55054619182464
|short_description=p1@Ccdc18
}}
}}

Latest revision as of 14:22, 1 October 2015

Short description:p1@Ccdc18
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ccdc18_5end
Coexpression cluster:MCL_coexpression_mm9:49
Association with transcript: 0bp_to_uc012eaq.1_5end
EntrezGene:Ccdc18
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression


Sample

p1@Ccdc18

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.87
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.67
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A113.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A313.97
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A521.69
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.56
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.24
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.14
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B92.09
Ileum epithelium, pool2.CNhs13232.10253-104C12.52
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F512.71
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F710.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.35
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F93.10
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.08
accessory axillary lymph node, adult.CNhs10475.1063-29H94.66
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C12.70
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F54.04
bone (os femoris), neonate N16.CNhs11225.1525-43A65.08
bone (os femoris), neonate N20.CNhs11195.1350-25C38.24
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.39
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.69
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.80
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.60
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C610.41
eyeball, embryo E14.CNhs10521.399-16E26.44
eyeball, embryo E15.CNhs10593.426-16C98.46
eyeball, embryo E17.CNhs11023.1261-18D49.80
eyeball, neonate N00.CNhs11207.633-15C69.80
eyeball, neonate N01.CNhs11140.1532-43E78.20
eyeball, neonate N02.CNhs11205.1551-44G87.03
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E23.88
forelimb, embryo E12.CNhs10600.359-14H29.83
forelimb, embryo E13.CNhs10589.384-1E25.98
forelimb, embryo E14.CNhs10577.413-26A83.51
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B55.14
gonad, embryo E13.CNhs11044.1564-45I68.36
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.40
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.10
heart, embryo E11.CNhs10586.331-24E94.14
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D44.02
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C63.55
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E33.50
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G13.29
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A33.97
intestine, embryo E12.CNhs11019.1251-16I56.19
intestine, embryo E13.CNhs11010.381-16D56.97
intestine, embryo E15.CNhs10602.976-16D87.99
intestine, embryo E16.CNhs10585.463-22H47.26
intestine, embryo E17.CNhs10582.482-18D36.67
intestine, embryo E18.CNhs10526.1289-20F73.80
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B85.03
intestine, neonate N07.CNhs11095.720-20F25.97
intestine, neonate N10.CNhs11098.755-23A55.46
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E35.19
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I92.47
kidney, embryo E15.CNhs10997.434-16F88.68
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I25.91
kidney, embryo E18.CNhs11001.1288-20C76.21
kidney, neonate N00.CNhs11214.646-21G75.89
kidney, neonate N10.CNhs11206.758-6D54.17
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F88.18
liver, embryo E13.CNhs10524.378-3H68.85
liver, embryo E14.CNhs10594.409-16E110.57
liver, embryo E15.CNhs10520.433-16D711.97
liver, embryo E16.CNhs10523.462-17F510.61
liver, embryo E17.CNhs10510.481-18A36.11
liver, embryo E18.CNhs10579.499-43G48.06
liver, neonate N00.CNhs11117.641-24F45.19
liver, neonate N03.CNhs11123.1345-25G27.14
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H13.59
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G27.01
lung, embryo E14.CNhs10604.404-26F88.47
lung, embryo E15.CNhs11020.432-17C511.03
lung, embryo E16.CNhs10998.458-17B614.55
lung, embryo E17.CNhs10605.480-44A69.72
lung, embryo E18.CNhs10583.1287-20I63.81
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E56.78
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E65.10
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.89
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.68
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I73.97
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I46.68
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F45.83
pancreas, embryo E15.CNhs11042.1556-45F24.84
pancreas, embryo E16.CNhs11003.460-26E53.77
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D86.77
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E67.56
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A54.07
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F53.78
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C36.76
skin, neonate N00.CNhs11124.650-25G44.84
skin, neonate N03.CNhs11215.662-22H37.84
skin, neonate N06.CNhs11097.693-20I57.04
skin, neonate N10.CNhs11108.762-6C48.54
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G28.37
spleen, embryo E16.CNhs11035.461-43C16.40
spleen, embryo E18.CNhs11011.1271-21F28.70
spleen, neonate N10.CNhs11116.752-24D116.58
spleen, neonate N20.CNhs11112.824-19H115.86
spleen, neonate N25.CNhs11099.1354-25G312.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.01
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E36.01
stomach, embryo E15.CNhs10603.1252-16G88.74
stomach, embryo E16.CNhs11022.459-17D47.24
stomach, embryo E17.CNhs11006.1035-18D58.36
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B85.39
stomach, neonate N07.CNhs11210.718-18A93.88
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I12.85
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G511.84
testis, embryo E13.CNhs11031.389-23F58.07
testis, embryo E15.CNhs11034.443-27C55.29
testis, embryo E16.CNhs11033.470-26G56.81
testis, embryo E17.CNhs11029.486-18I53.75
testis, embryo E18.CNhs11027.503-18G57.94
testis, neonate N00.CNhs11189.1300-22B75.52
testis, neonate N07.CNhs11222.726-26I48.85
testis, neonate N10.CNhs11204.763-44D99.12
testis, neonate N20.CNhs11110.839-18H320.78
testis, neonate N30.CNhs11130.1391-42E218.15
thymus, adult.CNhs10471.38-12B59.16
thymus, embryo E14.CNhs11041.402-44I49.53
thymus, embryo E15.CNhs11005.430-45I216.02
thymus, embryo E16.CNhs11002.456-26C528.84
thymus, embryo E17.CNhs10581.478-18C124.17
thymus, embryo E18.CNhs10595.1273-19G416.89
thymus, neonate N02.CNhs11181.1541-43F817.43
thymus, neonate N03.CNhs11137.2104-43C713.74
thymus, neonate N06.CNhs11197.681-26C419.89
thymus, neonate N07.CNhs11211.713-19D323.55
thymus, neonate N10.CNhs11194.748-24E416.64
thymus, neonate N20.CNhs11186.820-7A214.42
thymus, neonate N25.CNhs11125.1362-25G715.39
thymus, neonate N30.CNhs11132.1393-42G215.78
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.28
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.23
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I84.98
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H25.29
whole body, embryo E14.5.CNhs10578.420-27D29.24
whole body, embryo E14.CNhs10519.395-14B15.45
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.68
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.27
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.04
whole body, embryo E17.5.CNhs10513.490-9F95.79
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D14.63
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data