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MCL coexpression mm9:49

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Phase1 CAGE Peaks

 Short description
Mm9::chr10:110182489..110182589,+p1@E2f7
Mm9::chr10:4541086..4541128,+p1@Fbxo5
Mm9::chr10:4541132..4541146,+p2@Fbxo5
Mm9::chr10:4541176..4541187,+p4@Fbxo5
Mm9::chr10:53316866..53316881,+p2@Asf1a
Mm9::chr10:68815616..68815629,-p2@Cdk1
Mm9::chr10:68815634..68815677,-p1@Cdk1
Mm9::chr10:87609612..87609681,-p1@4930547N16Rik
Mm9::chr10:90633245..90633273,-p4@Tmpo
Mm9::chr10:90634270..90634355,-p1@Tmpo
Mm9::chr11:101413151..101413207,-p1@Brca1
Mm9::chr11:102110205..102110251,+p2@BC030867
Mm9::chr11:102786400..102786444,-p1@Kif18b
Mm9::chr11:11708926..11708970,-p1@Fignl1
Mm9::chr11:117687098..117687186,-p1@Tk1
Mm9::chr11:117710600..117710654,+p1@Birc5
Mm9::chr11:16851374..16851420,+p1@Fbxo48
Mm9::chr11:23156001..23156105,+p1@Xpo1
Mm9::chr11:3102615..3102657,+p2@Eif4enif1
Mm9::chr11:34647105..34647128,-p1@Ccdc99
Mm9::chr11:34647133..34647165,-p2@Ccdc99
Mm9::chr11:40546875..40546944,-p1@Hmmr
Mm9::chr11:40547141..40547205,+p2@Nudcd2
Mm9::chr11:68859142..68859215,+p1@Aurkb
Mm9::chr11:70833095..70833119,+p1@Mis12
Mm9::chr11:78115112..78115136,+p1@Spag5
Mm9::chr11:79902928..79902971,+p1@Atad5
Mm9::chr11:86014646..86014702,-p1@Brip1
Mm9::chr11:86922158..86922221,-p1@Prr11
Mm9::chr11:86922683..86922697,+p3@Fam33a
Mm9::chr11:86922754..86922776,+p1@Fam33a
Mm9::chr11:87861195..87861229,+p1@Srsf1
Mm9::chr11:94515028..94515075,-p1@Eme1
Mm9::chr11:98769141..98769180,+p1@Cdc6
Mm9::chr11:98885493..98885511,-p1@Top2a
Mm9::chr12:101121611..101121638,-p1@2610021K21Rik
Mm9::chr12:11272574..11272622,-p1@Gen1
Mm9::chr12:114067562..114067637,-p1@Cdca4
Mm9::chr12:117643576..117643627,-p1@D430020J02Rik
Mm9::chr12:117643630..117643658,-p2@D430020J02Rik
Mm9::chr12:117643870..117643939,+p1@Ncapg2
Mm9::chr12:25393139..25393157,+p1@Rrm2
Mm9::chr12:33172307..33172314,-p@chr12:33172307..33172314
-
Mm9::chr12:52449252..52449355,+p1@G2e3
Mm9::chr12:66273547..66273605,-p1@Mis18bp1
Mm9::chr12:70269795..70269826,+p1@Lrr1
Mm9::chr12:70269828..70269841,+p2@Lrr1
Mm9::chr12:70298114..70298144,-p1@1110034A24Rik
Mm9::chr12:70329154..70329171,-p1@Pole2
Mm9::chr13:101545799..101545848,-p1@Cenph
Mm9::chr13:105019009..105019062,+p1@Cenpk
Mm9::chr13:105019063..105019070,+p4@Cenpk
Mm9::chr13:105019074..105019085,+p2@Cenpk
Mm9::chr13:21845296..21845323,+p@chr13:21845296..21845323
+
Mm9::chr13:24853744..24853819,-p1@Gmnn
Mm9::chr13:3917403..3917465,-p1@Net1
Mm9::chr13:47201512..47201539,-p2@Dek
Mm9::chr13:55431084..55431137,-p1@Mxd3
Mm9::chr13:77274677..77274752,-p1@Ankrd32
Mm9::chr14:47896467..47896523,-p1@Wdhd1
Mm9::chr14:48037827..48037834,-p4@Dlgap5
Mm9::chr14:48037841..48037866,-p1@Dlgap5
Mm9::chr14:48037869..48037892,-p2@Dlgap5
Mm9::chr14:48037896..48037907,-p3@Dlgap5
Mm9::chr14:58444965..58445017,-p1@F630043A04Rik
Mm9::chr14:58445022..58445040,-p2@F630043A04Rik
Mm9::chr14:62267599..62267644,-p1@Dleu2
Mm9::chr14:62267648..62267651,-p3@Dleu2
Mm9::chr14:62950922..62950947,+p1@Rnaseh2b
Mm9::chr14:66424684..66424734,+p1@Pbk
Mm9::chr14:66452726..66452742,-p2@Esco2
Mm9::chr14:66452749..66452768,-p1@Esco2
Mm9::chr14:66452777..66452789,-p3@Esco2
Mm9::chr14:66452800..66452811,-p5@Esco2
Mm9::chr14:68313676..68313680,-p@chr14:68313676..68313680
-
Mm9::chr14:68333400..68333482,-p1@Cdca2
Mm9::chr14:68333642..68333697,-p2@Cdca2
Mm9::chr14:73725719..73725750,-p4@Rb1
Mm9::chr14:87257361..87257362,-p@chr14:87257361..87257362
-
Mm9::chr14:87540938..87540955,-p3@Diap3
Mm9::chr14:87540965..87541010,-p1@Diap3
Mm9::chr14:87541013..87541046,-p2@Diap3
Mm9::chr14:99445625..99445648,+p2@6720463M24Rik
Mm9::chr14:99445653..99445682,+p1@6720463M24Rik
Mm9::chr15:103070378..103070424,+p3@Gm10052
p3@Hnrnpa1
Mm9::chr15:57966602..57966650,-p1@Atad2
Mm9::chr15:85690119..85690174,+p1@Gtse1
Mm9::chr15:98905399..98905436,+p1@Troap
Mm9::chr15:99464392..99464396,-p@chr15:99464392..99464396
-
Mm9::chr15:99482011..99482061,-p1@Racgap1
Mm9::chr16:14163409..14163445,+p1@Nde1
Mm9::chr16:15637370..15637478,-p1@Mcm4
Mm9::chr16:18784402..18784406,-p@chr16:18784402..18784406
-
Mm9::chr16:18811677..18811702,-p1@Cdc45
Mm9::chr16:18811708..18811728,-p2@Cdc45
Mm9::chr16:18811731..18811736,-p3@Cdc45
Mm9::chr16:37011844..37011877,+p1@Polq
Mm9::chr16:48994310..48994352,+p1@C330027C09Rik
Mm9::chr16:98303597..98303604,-p2@A630089N07Rik
Mm9::chr17:24388267..24388326,-p1@Ccnf
Mm9::chr17:24388327..24388342,-p2@Ccnf
Mm9::chr17:34027529..34027597,-p1@Kifc1
p1@LOC100044006
p1@LOC100044746
Mm9::chr17:35653725..35653780,-p1@Tcf19
Mm9::chr17:53828556..53828578,-p2@Sgol1
Mm9::chr17:53828591..53828634,-p1@Sgol1
Mm9::chr17:56442754..56442772,+p5@Uhrf1
Mm9::chr17:56442776..56442801,+p3@Uhrf1
Mm9::chr17:71876098..71876157,-p1@Ndc80
Mm9::chr17:71876159..71876177,-p2@Ndc80
Mm9::chr17:95149435..95149461,+p1@2700099C18Rik
Mm9::chr17:95149465..95149481,+p2@2700099C18Rik
Mm9::chr18:11816340..11816385,+p2@Rbbp8
Mm9::chr18:34784609..34784654,+p1@Kif20a
Mm9::chr18:34784663..34784685,+p2@Kif20a
Mm9::chr18:34910999..34911011,-p2@Cdc25c
Mm9::chr18:34911196..34911214,-p3@Cdc25c
Mm9::chr18:74367390..74367413,-p2@Ska1
Mm9::chr19:10278370..10278438,-p1@Fen1
Mm9::chr19:34996841..34996894,+p1@Kif20b
Mm9::chr19:37450849..37450912,+p1@Kif11
Mm9::chr19:38129492..38129537,+p1@Cep55
Mm9::chr19:38129548..38129565,+p2@Cep55
Mm9::chr19:39005399..39005410,+p4@Hells
Mm9::chr19:39005418..39005431,+p2@Hells
Mm9::chr19:8893768..8893791,-p1@Ttc9c
Mm9::chr19:9973940..9973991,-p1@Incenp
Mm9::chr1:129998989..129999062,-p1@Zranb3
Mm9::chr1:138362913..138362955,+p@chr1:138362913..138362955
+
Mm9::chr1:138362960..138362982,+p@chr1:138362960..138362982
+
Mm9::chr1:141351324..141351402,+p1@Aspm
Mm9::chr1:141351405..141351419,+p2@Aspm
Mm9::chr1:165924868..165924896,-p2@BC055324
Mm9::chr1:165924898..165924939,-p1@BC055324
Mm9::chr1:171461474..171461568,-p1@Nuf2
Mm9::chr1:177810906..177810939,+p1@Exo1
Mm9::chr1:191511923..191511938,-p2@Cenpf
Mm9::chr1:191511953..191511977,-p1@Cenpf
Mm9::chr1:192886880..192886917,+p1@Nsl1
Mm9::chr1:33678261..33678268,-p@chr1:33678261..33678268
-
Mm9::chr1:33726590..33726637,-p1@Prim2
Mm9::chr1:58052824..58052903,+p1@Sgol2
Mm9::chr1:71076758..71076761,-p@chr1:71076758..71076761
-
Mm9::chr1:71149475..71149553,-p1@Bard1
Mm9::chr1:95239311..95239380,-p1@Pask
Mm9::chr2:109120966..109121020,+p1@Kif18a
Mm9::chr2:109857963..109858030,+p1@Ccdc34
Mm9::chr2:113688812..113688901,-p1@Arhgap11a
Mm9::chr2:118423968..118424003,+p1@Bub1b
Mm9::chr2:118424007..118424036,+p2@Bub1b
Mm9::chr2:118639931..118639971,+p1@D2Ertd750e
Mm9::chr2:118639973..118639997,+p2@D2Ertd750e
Mm9::chr2:118872865..118872895,+p1@Casc5
Mm9::chr2:118872898..118872950,+p2@Casc5
Mm9::chr2:118938545..118938618,+p1@Rad51
Mm9::chr2:119444191..119444246,-p1@Oip5
Mm9::chr2:119444457..119444473,+p1@Nusap1
Mm9::chr2:120557239..120557270,-p1@Cdan1
Mm9::chr2:121332484..121332528,+p1@Wdr76
Mm9::chr2:125450801..125450859,-p1@Cep152
Mm9::chr2:126959620..126959644,-p2@Ncaph
Mm9::chr2:126959645..126959688,-p1@Ncaph
Mm9::chr2:127657553..127657611,-p1@Bub1
Mm9::chr2:129122884..129122937,-p1@Ckap2l
Mm9::chr2:129122941..129122952,-p2@Ckap2l
Mm9::chr2:129626187..129626262,+p1@Stk35
Mm9::chr2:152673697..152673708,+p2@Tpx2
Mm9::chr2:152673729..152673812,+p1@Tpx2
Mm9::chr2:157030219..157030278,-p1@Rbl1
Mm9::chr2:164595421..164595454,+p1@Ube2c
Mm9::chr2:164595463..164595474,+p3@Ube2c
Mm9::chr2:174120902..174120943,-p1@Nespas
Mm9::chr2:23011384..23011445,-p1@Mastl
Mm9::chr2:3392226..3392247,-p1@Suv39h2
Mm9::chr2:4933762..4933812,-p1@Mcm10
Mm9::chr2:69044203..69044248,-p1@Spc25
Mm9::chr3:100773567..100773599,-p1@Ttf2
Mm9::chr3:116332180..116332184,+p@chr3:116332180..116332184
+
Mm9::chr3:127256380..127256430,+p1@4930422G04Rik
Mm9::chr3:134875560..134875616,+p1@Cenpe
Mm9::chr3:159158372..159158402,+p1@Depdc1a
Mm9::chr3:27052728..27052764,-p1@Ect2
Mm9::chr3:27052766..27052777,-p2@Ect2
Mm9::chr3:36470840..36470853,-p2@Ccna2
Mm9::chr3:36470874..36470925,-p1@Ccna2
Mm9::chr3:68848619..68848685,-p1@Trim59
Mm9::chr3:79432996..79433037,+p1@4930579G24Rik
Mm9::chr3:87885919..87885973,+p1@Iqgap3
Mm9::chr4:108252050..108252075,+p1@Orc1
Mm9::chr4:11118923..11118936,+p1@Ccne2
Mm9::chr4:114672779..114672794,+p1@Stil
Mm9::chr4:114672795..114672814,+p2@Stil
Mm9::chr4:11486061..11486126,+p1@Rad54b
Mm9::chr4:116300091..116300108,-p1@Nasp
Mm9::chr4:116855142..116855208,-p1@Kif2c
Mm9::chr4:118109889..118109909,-p1@Cdc20
Mm9::chr4:124614096..124614168,-p1@Cdca8
Mm9::chr4:126234215..126234236,+p2@Clspn
Mm9::chr4:126234238..126234264,+p1@Clspn
Mm9::chr4:134066917..134066991,+p1@2610002D18Rik
Mm9::chr4:43512489..43512549,-p1@E130306D19Rik
Mm9::chr4:44313775..44313808,+p2@Melk
Mm9::chr4:44313812..44313874,+p1@Melk
Mm9::chr4:52452096..52452104,+p2@Smc2
Mm9::chr4:52452107..52452159,+p1@Smc2
Mm9::chr5:108561822..108561903,+p1@Ccdc18
Mm9::chr5:111268992..111269041,+p1@Chek2
Mm9::chr5:124199705..124199744,+p1@Kntc1
Mm9::chr5:124889900..124890000,+p2@Setd8
Mm9::chr5:28117880..28117960,-p1@Paxip1
Mm9::chr5:30969263..30969336,+p1@Cenpa
Mm9::chr5:33994961..33994976,-p1@Slbp
Mm9::chr5:34001216..34001265,+p1@Tacc3
Mm9::chr5:34163023..34163090,+p2@Whsc1
Mm9::chr5:46061146..46061184,+p1@Ncapg
Mm9::chr5:77017840..77017862,+p2@Cep135
Mm9::chr6:120307360..120307418,-p1@Ccdc77
Mm9::chr6:124780211..124780227,+p2@Cdca3
Mm9::chr6:124780236..124780269,+p1@Cdca3
Mm9::chr6:125141553..125141638,-p1@Ncapd2
Mm9::chr6:125141639..125141681,-p2@Ncapd2
Mm9::chr6:126889542..126889622,-p1@Rad51ap1
Mm9::chr6:128312879..128312944,-p1@5930416I19Rik
Mm9::chr6:134879107..134879121,+p2@1190002F15Rik
Mm9::chr6:134879136..134879182,+p1@1190002F15Rik
Mm9::chr6:29997979..29998049,+p1@Nrf1
Mm9::chr6:47544966..47545046,-p1@Ezh2
Mm9::chr6:51420632..51420672,+p1@Cbx3
p1@Gm10068
p1@Gm5196
p1@Gm6917
p1@Gm7469
Mm9::chr6:66485386..66485406,+p2@LOC100045924
p2@Mad2l1
Mm9::chr6:66485412..66485476,+p1@LOC100045924
p1@Mad2l1
Mm9::chr6:87622136..87622173,-p1@Aplf
Mm9::chr6:88848658..88848707,-p1@Mcm2
Mm9::chr7:109214252..109214285,+p2@Trpc2
Mm9::chr7:109590259..109590270,+p4@Rrm1
Mm9::chr7:109590290..109590339,+p2@Rrm1
Mm9::chr7:109590345..109590402,+p1@Rrm1
Mm9::chr7:117265547..117265649,+p1@Wee1
Mm9::chr7:129276377..129276457,-p1@Palb2
Mm9::chr7:134005945..134005961,+p1@Hirip3
Mm9::chr7:134170081..134170122,-p2@Maz
Mm9::chr7:134185907..134185928,-p1@Kif22
Mm9::chr7:134185935..134185958,-p2@Kif22
Mm9::chr7:13864127..13864223,+p1@Lig1
Mm9::chr7:13864225..13864249,+p2@Lig1
Mm9::chr7:142908094..142908155,-p1@Mki67
Mm9::chr7:142908156..142908163,-p4@Mki67
Mm9::chr7:148629888..148629915,-p1@Lrdd
Mm9::chr7:56136349..56136360,-p5@E2f8
Mm9::chr7:56136362..56136400,-p1@E2f8
Mm9::chr7:56136402..56136420,-p3@E2f8
Mm9::chr7:56137011..56137041,-p2@E2f8
Mm9::chr7:86537191..86537232,+p1@Fanci
Mm9::chr7:86805097..86805147,+p1@5730590G19Rik
Mm9::chr7:87439345..87439378,+p1@Prc1
Mm9::chr7:87679954..87680007,-p1@Blm
Mm9::chr8:125842453..125842479,-p1@Fanca
Mm9::chr8:18595144..18595186,+p2@Mcph1
Mm9::chr8:4779513..4779591,-p1@Shcbp1
Mm9::chr8:54724299..54724375,-p1@Neil3
Mm9::chr8:59990630..59990666,+p1@Hmgb2
Mm9::chr8:73929902..73929949,+p1@Ankle1
Mm9::chr8:87823791..87823827,+p1@Orc6
Mm9::chr8:96738467..96738508,+p1@Nup93
Mm9::chr9:109778045..109778095,+p1@Cdc25a
Mm9::chr9:122860169..122860224,+p1@Kif15
Mm9::chr9:20757246..20757278,-p1@Dnmt1
Mm9::chr9:20757282..20757325,-p2@Dnmt1
Mm9::chr9:22193530..22193543,-p2@Anln
Mm9::chr9:22193557..22193640,-p1@Anln
Mm9::chr9:26838303..26838357,+p@chr9:26838303..26838357
+
Mm9::chr9:36534173..36534192,-p1@Chek1
Mm9::chr9:37155924..37155951,-p1@Ccdc15
Mm9::chr9:44143275..44143303,+p@chr9:44143275..44143303
+
Mm9::chr9:61794537..61794551,-p1@Kif23
Mm9::chr9:61794561..61794572,-p2@Kif23
Mm9::chr9:61794575..61794586,-p3@Kif23
Mm9::chr9:64020696..64020725,-p1@Zwilch
Mm9::chr9:65434956..65434992,+p2@Pif1
Mm9::chr9:65434994..65435028,+p1@Pif1
Mm9::chr9:65738098..65738150,+p1@2810417H13Rik
p1@Gm15428
Mm9::chr9:65738151..65738165,+p2@2810417H13Rik
p2@Gm15428
Mm9::chr9:70269298..70269336,-p2@Ccnb2
Mm9::chr9:83728291..83728343,+p1@Ttk
Mm9::chrX:130842678..130842748,+p1@Cenpi
Mm9::chrX:161418592..161418656,+p1@Fancb
Mm9::chrX:71212312..71212347,-p@chrX:71212312..71212347
-
Mm9::chrX:90877452..90877525,-p1@Pola1
Mm9::chrX:97821411..97821497,+p1@Kif4
Mm9::chrX:97851786..97851790,+p@chrX:97851786..97851790
+
Mm9::chrX:99352320..99352401,-p1@Ercc6l
Mm9::chrX:99352404..99352435,-p2@Ercc6l


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


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