FFCP PHASE1:Mm9::chr5:53225407..53225422,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:53225407..53225422,+
|short_description=p3@Anapc4
|description=CAGE_peak_3_at_Anapc4_5end
|association_with_transcript=33bp_to_NM_024213,uc008xkw.1,uc008xk...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=52206 | |EntrezGene=52206 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3TM92,Q91W96 | |UniProt=Q3TM92,Q91W96 | ||
|association_with_transcript=33bp_to_NM_024213,uc008xkw.1,uc008xkx.1_5end | |||
|cluster_id=chr5:53225407..53225422,+ | |||
|description=CAGE_peak_3_at_Anapc4_5end | |||
|id=chr5:53225407..53225422,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.89e-11,17;UBERON:0005181,1.89e-11,17;UBERON:0002224,1.89e-11,17;UBERON:0000915,1.89e-11,17;UBERON:0008947,1.89e-11,17;UBERON:0003258,1.89e-11,17;UBERON:0005153,3.45e-11,17;UBERON:0002100,1.97e-10,90;UBERON:0005157,3.03e-10,20;UBERON:0000065,1.80e-09,41;UBERON:0002048,2.22e-09,14;UBERON:0000117,2.22e-09,14;UBERON:0000171,2.22e-09,14;UBERON:0000170,2.22e-09,14;UBERON:0005597,2.22e-09,14;UBERON:0000118,2.22e-09,14;UBERON:0001004,3.95e-09,42;UBERON:0005177,1.15e-08,79;UBERON:0004119,1.25e-08,118;UBERON:0000925,1.25e-08,118;UBERON:0006595,1.25e-08,118;UBERON:0001041,2.31e-08,80;UBERON:0001007,7.89e-08,116;UBERON:0001555,7.89e-08,116;UBERON:0007026,7.89e-08,116;UBERON:0004921,2.24e-07,114;UBERON:0009569,7.87e-07,66 | |||
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| ||
|short_description=p3@Anapc4 | |||
}} | }} |
Latest revision as of 02:01, 26 September 2015
Short description: | p3@Anapc4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Anapc4_5end |
Coexpression cluster: | NA |
Association with transcript: | 33bp_to_NM_024213, uc008xkw.1, uc008xkx.1_5end |
EntrezGene: | Anapc4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 1.89e-11 | 17 |
thoracic segment organ | 1.89e-11 | 17 |
thoracic cavity | 1.89e-11 | 17 |
thoracic segment of trunk | 1.89e-11 | 17 |
respiratory primordium | 1.89e-11 | 17 |
endoderm of foregut | 1.89e-11 | 17 |
epithelial bud | 3.45e-11 | 17 |
trunk | 1.97e-10 | 90 |
epithelial fold | 3.03e-10 | 20 |
respiratory tract | 1.80e-09 | 41 |
lung | 2.22e-09 | 14 |
respiratory tube | 2.22e-09 | 14 |
respiration organ | 2.22e-09 | 14 |
pair of lungs | 2.22e-09 | 14 |
lung primordium | 2.22e-09 | 14 |
lung bud | 2.22e-09 | 14 |
respiratory system | 3.95e-09 | 42 |
trunk region element | 1.15e-08 | 79 |
endoderm-derived structure | 1.25e-08 | 118 |
endoderm | 1.25e-08 | 118 |
presumptive endoderm | 1.25e-08 | 118 |
foregut | 2.31e-08 | 80 |
digestive system | 7.89e-08 | 116 |
digestive tract | 7.89e-08 | 116 |
primitive gut | 7.89e-08 | 116 |
subdivision of digestive tract | 2.24e-07 | 114 |
subdivision of trunk | 7.87e-07 | 66 |