FFCP PHASE1:Mm9::chr6:123073532..123073546,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:123073532..123073546,+
|short_description=p5@Clec4a2
|description=CAGE_peak_5_at_Clec4a2_5end
|association_with_transcript=47bp_to_ENSMUST00000032248_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=26888 | |EntrezGene=26888 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=86 | |||
|TSSclassifier=NA | |||
|UniProt=Q923C7 | |UniProt=Q923C7 | ||
|association_with_transcript=47bp_to_ENSMUST00000032248_5end | |||
|cluster_id=chr6:123073532..123073546,+ | |||
|description=CAGE_peak_5_at_Clec4a2_5end | |||
|id=chr6:123073532..123073546,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.20e-10,16;CL:0000049,1.16e-09,19;CL:0000557,5.34e-09,7;CL:0000839,8.38e-08,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!4.89e-11!193;UBERON:0004120!4.89e-11!193;UBERON:0006603!4.89e-11!193;UBERON:0001474!1.01e-10!22;UBERON:0004765!1.01e-10!22;UBERON:0001434!1.01e-10!22;UBERON:0002371!1.08e-10!16;UBERON:0002204!2.38e-09!32;UBERON:0002405!1.41e-07!70;UBERON:0009569!3.30e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.10e-18,16;UBERON:0001474,3.99e-17,22;UBERON:0004765,3.99e-17,22;UBERON:0001434,3.99e-17,22;UBERON:0002204,6.90e-16,32;UBERON:0002193,1.22e-09,48;UBERON:0002405,1.22e-09,48;UBERON:0002390,1.33e-09,45;UBERON:0003061,1.33e-09,45;UBERON:0003887,7.08e-08,10;UBERON:0002106,3.01e-07,6;UBERON:0004457,3.01e-07,6;UBERON:0000042,3.01e-07,6;UBERON:0004854,3.01e-07,6;UBERON:0009034,3.01e-07,6;UBERON:0002095,3.01e-07,6;UBERON:0004782,3.01e-07,6;UBERON:0003281,3.01e-07,6;UBERON:0009664,3.01e-07,6;UBERON:0002296,3.01e-07,6;UBERON:0005602,3.01e-07,6;UBERON:0001179,3.01e-07,6;UBERON:0006293,3.01e-07,6;UBERON:0003081,4.61e-07,87 | |||
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| ||
|short_description=p5@Clec4a2 | |||
}} | }} |
Latest revision as of 15:18, 26 September 2015
Short description: | p5@Clec4a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Clec4a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:86 |
Association with transcript: | 47bp_to_ENSMUST00000032248_5end |
EntrezGene: | Clec4a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.20e-10 | 16 |
common myeloid progenitor | 1.16e-09 | 19 |
granulocyte monocyte progenitor cell | 5.34e-09 | 7 |
myeloid lineage restricted progenitor cell | 8.38e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.10e-18 | 16 |
bone element | 3.99e-17 | 22 |
skeletal element | 3.99e-17 | 22 |
skeletal system | 3.99e-17 | 22 |
musculoskeletal system | 6.90e-16 | 32 |
hemolymphoid system | 1.22e-09 | 48 |
immune system | 1.22e-09 | 48 |
hematopoietic system | 1.33e-09 | 45 |
blood island | 1.33e-09 | 45 |
intraembryonic coelom | 7.08e-08 | 10 |
spleen | 3.01e-07 | 6 |
cavity lining | 3.01e-07 | 6 |
serous membrane | 3.01e-07 | 6 |
gastrointestinal system mesentery | 3.01e-07 | 6 |
stomach region | 3.01e-07 | 6 |
mesentery | 3.01e-07 | 6 |
gastrointestinal system serosa | 3.01e-07 | 6 |
mesentery of stomach | 3.01e-07 | 6 |
gut mesentery | 3.01e-07 | 6 |
dorsal mesentery | 3.01e-07 | 6 |
dorsal mesogastrium | 3.01e-07 | 6 |
peritoneal cavity | 3.01e-07 | 6 |
spleen primordium | 3.01e-07 | 6 |
lateral plate mesoderm | 4.61e-07 | 87 |