FFCP PHASE1:Mm9::chr6:78321842..78321860,+: Difference between revisions
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|id=chr6:78321842..78321860,+
|short_description=p@chr6:78321842..78321860,+
|description=CAGE_peak_at_chr6:78321842..78321860,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=448 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:78321842..78321860,+ | |||
|description=CAGE_peak_at_chr6:78321842..78321860,+ | |||
|id=chr6:78321842..78321860,+ | |||
|ontology_enrichment_celltype=CL:0000239!2.98e-22!6;CL:0000677!2.98e-22!6;CL:0000212!2.98e-22!6;CL:0000584!2.98e-22!6;CL:0000075!5.24e-19!7;CL:0002563!1.13e-14!9;CL:0002251!1.13e-14!9;CL:0000473!1.15e-12!3;CL:0000627!1.15e-12!3;CL:0000682!1.15e-12!3;CL:0000066!4.09e-11!25;CL:0002076!1.37e-08!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.70e-19,6;CL:0000677,1.70e-19,6;CL:0000584,1.70e-19,6;CL:0000075,1.06e-16,7;CL:0000682,2.39e-15,3;CL:0002563,5.74e-13,9;CL:0002251,5.74e-13,9;CL:0000066,2.91e-11,25;CL:0002076,1.02e-07,15;CL:0000473,7.58e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.34e-34!15;UBERON:0001242!3.93e-28!13;UBERON:0000060!3.93e-28!13;UBERON:0001262!3.93e-28!13;UBERON:0004786!3.93e-28!13;UBERON:0000160!4.26e-25!43;UBERON:0004923!7.92e-21!24;UBERON:0005409!2.07e-17!59;UBERON:0003350!1.13e-14!9;UBERON:0004808!1.13e-14!9;UBERON:0001277!1.13e-14!9;UBERON:0000331!4.72e-13!3;UBERON:0002116!4.72e-13!3;UBERON:0001204!4.72e-13!3;UBERON:0001168!4.72e-13!3;UBERON:0000485!6.54e-12!11;UBERON:0001007!3.51e-08!128;UBERON:0001555!3.51e-08!128;UBERON:0007026!3.51e-08!128;UBERON:0001962!3.52e-08!2;UBERON:0001961!3.52e-08!2;UBERON:0001744!3.52e-08!2;UBERON:0002108!3.68e-08!16;UBERON:0004119!5.34e-08!130;UBERON:0000925!5.34e-08!130;UBERON:0006595!5.34e-08!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.50e-36,15;UBERON:0001242,1.41e-28,13;UBERON:0001262,1.41e-28,13;UBERON:0004786,1.41e-28,13;UBERON:0000160,1.17e-23,31;UBERON:0004923,4.02e-22,24;UBERON:0000331,7.90e-16,3;UBERON:0002116,7.90e-16,3;UBERON:0001204,7.90e-16,3;UBERON:0001168,7.90e-16,3;UBERON:0005409,6.25e-15,47;UBERON:0003350,5.74e-13,9;UBERON:0004808,5.74e-13,9;UBERON:0001277,5.74e-13,9;UBERON:0002108,5.31e-12,4;UBERON:0000485,1.38e-10,11;UBERON:0001962,8.81e-10,2;UBERON:0001961,8.81e-10,2;UBERON:0001744,8.81e-10,2;UBERON:0002465,8.37e-07,3;UBERON:0001007,9.88e-07,116;UBERON:0001555,9.88e-07,116;UBERON:0007026,9.88e-07,116 | |||
|phase1_expression=0,8.02643437570531,9.09998478779072,6.0492842261366,4.50806156951712,0.839396359559449,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,3.67054849707472,14.9300310669905,11.630573896295,7.97243560937789,43.1353162165969,11.8454160987167,32.5943850663298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,11.1069237998689,0,0,0,0,0,0,1.89811624617805,0,0,0,0,3.59527763461689,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,7.37930260024991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,8.02643437570531,9.09998478779072,6.0492842261366,4.50806156951712,0.839396359559449,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,3.67054849707472,14.9300310669905,11.630573896295,7.97243560937789,43.1353162165969,11.8454160987167,32.5943850663298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,11.1069237998689,0,0,0,0,0,0,1.89811624617805,0,0,0,0,3.59527763461689,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,7.37930260024991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:78321842..78321860,+ | |||
}} | }} |
Latest revision as of 03:28, 6 August 2015
Short description: | p@chr6:78321842..78321860, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78321842..78321860, + |
Coexpression cluster: | MCL_coexpression_mm9:448 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.70e-19 | 6 |
gut absorptive cell | 1.70e-19 | 6 |
enterocyte | 1.70e-19 | 6 |
columnar/cuboidal epithelial cell | 1.06e-16 | 7 |
M cell of gut | 2.39e-15 | 3 |
intestinal epithelial cell | 5.74e-13 | 9 |
epithelial cell of alimentary canal | 5.74e-13 | 9 |
epithelial cell | 2.91e-11 | 25 |
endo-epithelial cell | 1.02e-07 | 15 |
defensive cell | 7.58e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.50e-36 | 15 |
intestinal mucosa | 1.41e-28 | 13 |
wall of intestine | 1.41e-28 | 13 |
gastrointestinal system mucosa | 1.41e-28 | 13 |
intestine | 1.17e-23 | 31 |
organ component layer | 4.02e-22 | 24 |
ileal mucosa | 7.90e-16 | 3 |
ileum | 7.90e-16 | 3 |
mucosa of small intestine | 7.90e-16 | 3 |
wall of small intestine | 7.90e-16 | 3 |
gastrointestinal system | 6.25e-15 | 47 |
epithelium of mucosa | 5.74e-13 | 9 |
gastrointestinal system epithelium | 5.74e-13 | 9 |
intestinal epithelium | 5.74e-13 | 9 |
small intestine | 5.31e-12 | 4 |
simple columnar epithelium | 1.38e-10 | 11 |
gut-associated lymphoid tissue | 8.81e-10 | 2 |
mucosa-associated lymphoid tissue | 8.81e-10 | 2 |
lymphoid tissue | 8.81e-10 | 2 |
lymphoid system | 8.37e-07 | 3 |
digestive system | 9.88e-07 | 116 |
digestive tract | 9.88e-07 | 116 |
primitive gut | 9.88e-07 | 116 |