FFCP PHASE1:Mm9::chr6:78331062..78331073,+: Difference between revisions
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|id=chr6:78331062..78331073,+
|short_description=p@chr6:78331062..78331073,+
|description=CAGE_peak_at_chr6:78331062..78331073,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2450 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:78331062..78331073,+ | |||
|description=CAGE_peak_at_chr6:78331062..78331073,+ | |||
|id=chr6:78331062..78331073,+ | |||
|ontology_enrichment_celltype=CL:0000239!3.92e-17!6;CL:0000677!3.92e-17!6;CL:0000212!3.92e-17!6;CL:0000584!3.92e-17!6;CL:0002563!6.48e-15!9;CL:0002251!6.48e-15!9;CL:0000075!1.33e-14!7;CL:0000066!1.09e-09!25;CL:0000473!4.87e-09!3;CL:0000627!4.87e-09!3;CL:0000682!4.87e-09!3;CL:0002076!1.40e-08!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.13e-16,6;CL:0000677,2.13e-16,6;CL:0000584,2.13e-16,6;CL:0000075,4.88e-14,7;CL:0002563,6.92e-11,9;CL:0002251,6.92e-11,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.22e-32!43;UBERON:0000344!1.14e-30!15;UBERON:0001242!4.49e-25!13;UBERON:0000060!4.49e-25!13;UBERON:0001262!4.49e-25!13;UBERON:0004786!4.49e-25!13;UBERON:0005409!3.48e-22!59;UBERON:0004923!3.70e-18!24;UBERON:0003350!6.48e-15!9;UBERON:0004808!6.48e-15!9;UBERON:0001277!6.48e-15!9;UBERON:0000485!4.90e-12!11;UBERON:0002108!1.46e-10!16;UBERON:0001007!1.12e-09!128;UBERON:0001555!1.12e-09!128;UBERON:0007026!1.12e-09!128;UBERON:0004119!1.89e-09!130;UBERON:0000925!1.89e-09!130;UBERON:0006595!1.89e-09!130;UBERON:0000331!2.08e-09!3;UBERON:0002116!2.08e-09!3;UBERON:0001204!2.08e-09!3;UBERON:0001168!2.08e-09!3;UBERON:0004921!8.09e-08!126;UBERON:0004185!8.09e-08!126;UBERON:0001962!2.85e-07!2;UBERON:0001961!2.85e-07!2;UBERON:0001744!2.85e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.77e-31,31;UBERON:0000344,2.41e-30,15;UBERON:0001242,3.05e-23,13;UBERON:0001262,3.05e-23,13;UBERON:0004786,3.05e-23,13;UBERON:0005409,1.48e-19,47;UBERON:0004923,2.59e-18,24;UBERON:0002108,5.66e-16,4;UBERON:0000331,2.68e-12,3;UBERON:0002116,2.68e-12,3;UBERON:0001204,2.68e-12,3;UBERON:0001168,2.68e-12,3;UBERON:0003350,6.92e-11,9;UBERON:0004808,6.92e-11,9;UBERON:0001277,6.92e-11,9;UBERON:0001962,2.22e-09,2;UBERON:0001961,2.22e-09,2;UBERON:0001744,2.22e-09,2;UBERON:0000485,7.11e-09,11;UBERON:0001007,1.96e-08,116;UBERON:0001555,1.96e-08,116;UBERON:0007026,1.96e-08,116;UBERON:0004119,3.08e-08,118;UBERON:0000925,3.08e-08,118;UBERON:0006595,3.08e-08,118 | |||
|phase1_expression=0,1.74487703819681,1.81999695755814,12.7034968748869,13.023288978605,0.33575854382378,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6394014006791,13.9939661450974,2.29692785646008,0.430761996159075,0.861884930743556,12.7315691035771,1.76421090831952,1.33038306393183,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.240110429178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61711931072457,21.6849464664106,0,0,0,0,0,0,24.2009821387701,0,0,0.198956472041151,0,16.178749355776,15.9942156907274,13.3424653080426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,1.8962205476149,57.9802347162493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.99554007911642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.74487703819681,1.81999695755814,12.7034968748869,13.023288978605,0.33575854382378,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6394014006791,13.9939661450974,2.29692785646008,0.430761996159075,0.861884930743556,12.7315691035771,1.76421090831952,1.33038306393183,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.240110429178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61711931072457,21.6849464664106,0,0,0,0,0,0,24.2009821387701,0,0,0.198956472041151,0,16.178749355776,15.9942156907274,13.3424653080426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,1.8962205476149,57.9802347162493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.99554007911642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:78331062..78331073,+ | |||
}} | }} |
Latest revision as of 03:37, 6 August 2015
Short description: | p@chr6:78331062..78331073, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78331062..78331073, + |
Coexpression cluster: | MCL_coexpression_mm9:2450 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.13e-16 | 6 |
gut absorptive cell | 2.13e-16 | 6 |
enterocyte | 2.13e-16 | 6 |
columnar/cuboidal epithelial cell | 4.88e-14 | 7 |
intestinal epithelial cell | 6.92e-11 | 9 |
epithelial cell of alimentary canal | 6.92e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.77e-31 | 31 |
mucosa | 2.41e-30 | 15 |
intestinal mucosa | 3.05e-23 | 13 |
wall of intestine | 3.05e-23 | 13 |
gastrointestinal system mucosa | 3.05e-23 | 13 |
gastrointestinal system | 1.48e-19 | 47 |
organ component layer | 2.59e-18 | 24 |
small intestine | 5.66e-16 | 4 |
ileal mucosa | 2.68e-12 | 3 |
ileum | 2.68e-12 | 3 |
mucosa of small intestine | 2.68e-12 | 3 |
wall of small intestine | 2.68e-12 | 3 |
epithelium of mucosa | 6.92e-11 | 9 |
gastrointestinal system epithelium | 6.92e-11 | 9 |
intestinal epithelium | 6.92e-11 | 9 |
gut-associated lymphoid tissue | 2.22e-09 | 2 |
mucosa-associated lymphoid tissue | 2.22e-09 | 2 |
lymphoid tissue | 2.22e-09 | 2 |
simple columnar epithelium | 7.11e-09 | 11 |
digestive system | 1.96e-08 | 116 |
digestive tract | 1.96e-08 | 116 |
primitive gut | 1.96e-08 | 116 |
endoderm-derived structure | 3.08e-08 | 118 |
endoderm | 3.08e-08 | 118 |
presumptive endoderm | 3.08e-08 | 118 |