FFCP PHASE1:Mm9::chr8:108582757..108582770,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:108582757..108582770,+
|short_description=p@chr8:108582757..108582770,+
|description=CAGE_peak_at_chr8:108582757..108582770,+
|association_with_transcript=...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:108582757..108582770,+ | |||
|description=CAGE_peak_at_chr8:108582757..108582770,+ | |||
|id=chr8:108582757..108582770,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.25e-17!9;CL:0000789!1.25e-17!9;CL:0002420!1.25e-17!9;CL:0002419!1.25e-17!9;CL:0000790!1.25e-17!9;CL:0000838!2.41e-16!12;CL:0000624!2.88e-15!8;CL:0000542!5.96e-15!13;CL:0000051!5.96e-15!13;CL:0000988!1.28e-14!32;CL:0002032!1.28e-14!32;CL:0000037!1.28e-14!32;CL:0000566!1.28e-14!32;CL:0000837!1.28e-14!32;CL:0000084!3.65e-14!11;CL:0000827!3.65e-14!11;CL:0002320!4.62e-12!46;CL:0000134!4.62e-12!46;CL:0000738!5.11e-11!17;CL:0002087!5.11e-11!17;CL:0000893!1.51e-10!6;CL:0002489!1.51e-10!6;CL:0000898!1.51e-10!6;CL:0000809!1.51e-10!6;CL:0000810!1.51e-10!6;CL:0000895!1.51e-10!6;CL:0000808!1.51e-10!6;CL:0000894!1.51e-10!6;CL:0000806!1.51e-10!6;CL:0000807!1.51e-10!6;CL:0000805!1.51e-10!6;CL:0002425!1.51e-10!6;CL:0002436!1.51e-10!6;CL:0002427!1.51e-10!6;CL:0002428!1.51e-10!6;CL:0002429!1.51e-10!6;CL:0002433!1.51e-10!6;CL:0002431!1.51e-10!6;CL:0002432!1.51e-10!6;CL:0002031!2.44e-10!25;CL:0000034!1.01e-09!97;CL:0000219!1.06e-09!54;CL:0000063!1.86e-09!66;CL:0000723!1.24e-08!91;CL:0000048!1.24e-08!91;CL:0000144!9.98e-07!121;CL:0000012!9.98e-07!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.93e-16,12;CL:0000542,5.09e-15,13;CL:0000051,5.09e-15,13;CL:0000791,3.19e-14,9;CL:0000789,3.19e-14,9;CL:0002420,3.19e-14,9;CL:0002419,3.19e-14,9;CL:0000790,3.19e-14,9;CL:0000084,1.06e-11,11;CL:0000827,1.06e-11,11;CL:0000738,1.64e-11,17;CL:0002087,1.64e-11,17;CL:0000624,1.97e-09,8;CL:0000815,3.04e-09,1;CL:0000792,3.04e-09,1;CL:0000625,4.39e-09,1;CL:0000945,6.33e-09,1;CL:0000236,6.33e-09,1;CL:0000826,6.33e-09,1;CL:0000355,8.73e-09,9;CL:0002031,7.70e-08,25 | |||
|ontology_enrichment_disease=DOID:0060100!3.36e-09!3;DOID:4045!3.36e-09!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.47e-25,3;DOID:4045,4.47e-25,3;DOID:0050686,6.95e-13,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!4.62e-12!46;UBERON:0002370!1.33e-08!23;UBERON:0000974!1.33e-08!23;UBERON:0004807!1.33e-08!23;UBERON:0005058!1.33e-08!23;UBERON:0003351!1.33e-08!23;UBERON:0009113!1.33e-08!23;UBERON:0003295!1.33e-08!23;UBERON:0009722!1.33e-08!23;UBERON:0005562!1.33e-08!23;UBERON:0007690!1.33e-08!23;UBERON:0006562!3.62e-08!24;UBERON:0003408!3.62e-08!24;UBERON:0001557!3.62e-08!24;UBERON:0001042!3.62e-08!24;UBERON:0008814!3.62e-08!24;UBERON:0009145!3.62e-08!24;UBERON:0002390!1.63e-07!45;UBERON:0003061!1.63e-07!45;UBERON:0000072!4.68e-07!27;UBERON:0002193!7.26e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,8.73e-09,9;UBERON:0002036,8.73e-09,9;UBERON:0002385,8.73e-09,9;UBERON:0000486,8.73e-09,9;UBERON:0007503,8.73e-09,9;UBERON:0001015,8.73e-09,9;UBERON:0002329,8.73e-09,9;UBERON:0003082,8.73e-09,9;UBERON:0003059,8.73e-09,9;UBERON:0007282,8.73e-09,9;UBERON:0004290,8.73e-09,9;UBERON:0009618,8.73e-09,9;UBERON:0000383,5.83e-08,10;UBERON:0007524,2.77e-07,11;UBERON:0003077,2.77e-07,11;UBERON:0007285,2.77e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,2.58246646883153,0.985521055061667,0.70219357896598,0,0.159544317990673,1.54080656938085,0.961624426608971,0,0,0,0.315462165358238,0.137114433605739,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,2.92972141515835,3.906676722619,2.61761871986899,8.82347232046521,3.41522742479223,2.91306211818692,0,0,0,0,0,0,0,0,0,1.51004345451963,2.17608642603403,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0.179026695667481,0,0.120195449519969,0,0.302899349844443,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,2.58246646883153,0.985521055061667,0.70219357896598,0,0.159544317990673,1.54080656938085,0.961624426608971,0,0,0,0.315462165358238,0.137114433605739,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,2.92972141515835,3.906676722619,2.61761871986899,8.82347232046521,3.41522742479223,2.91306211818692,0,0,0,0,0,0,0,0,0,1.51004345451963,2.17608642603403,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0.179026695667481,0,0.120195449519969,0,0.302899349844443,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:108582757..108582770,+ | |||
}} | }} |
Latest revision as of 20:35, 5 August 2015
Short description: | p@chr8:108582757..108582770, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:108582757..108582770, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.93e-16 | 12 |
lymphocyte | 5.09e-15 | 13 |
common lymphoid progenitor | 5.09e-15 | 13 |
mature alpha-beta T cell | 3.19e-14 | 9 |
alpha-beta T cell | 3.19e-14 | 9 |
immature T cell | 3.19e-14 | 9 |
mature T cell | 3.19e-14 | 9 |
immature alpha-beta T cell | 3.19e-14 | 9 |
T cell | 1.06e-11 | 11 |
pro-T cell | 1.06e-11 | 11 |
leukocyte | 1.64e-11 | 17 |
nongranular leukocyte | 1.64e-11 | 17 |
CD4-positive, alpha-beta T cell | 1.97e-09 | 8 |
regulatory T cell | 3.04e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.04e-09 | 1 |
CD8-positive, alpha-beta T cell | 4.39e-09 | 1 |
lymphocyte of B lineage | 6.33e-09 | 1 |
B cell | 6.33e-09 | 1 |
pro-B cell | 6.33e-09 | 1 |
multi-potent skeletal muscle stem cell | 8.73e-09 | 9 |
hematopoietic lineage restricted progenitor cell | 7.70e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 8.73e-09 | 9 |
striated muscle tissue | 8.73e-09 | 9 |
muscle tissue | 8.73e-09 | 9 |
multilaminar epithelium | 8.73e-09 | 9 |
epithelial vesicle | 8.73e-09 | 9 |
musculature | 8.73e-09 | 9 |
somite | 8.73e-09 | 9 |
myotome | 8.73e-09 | 9 |
presomitic mesoderm | 8.73e-09 | 9 |
presumptive segmental plate | 8.73e-09 | 9 |
dermomyotome | 8.73e-09 | 9 |
trunk paraxial mesoderm | 8.73e-09 | 9 |
musculature of body | 5.83e-08 | 10 |
dense mesenchyme tissue | 2.77e-07 | 11 |
paraxial mesoderm | 2.77e-07 | 11 |
presumptive paraxial mesoderm | 2.77e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.47e-25 | 3 |
muscle cancer | 4.47e-25 | 3 |
organ system cancer | 6.95e-13 | 6 |