FFCP PHASE1:Mm9::chr9:65270702..65270717,-: Difference between revisions
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|id=chr9:65270702..65270717,-
|short_description=p1@Ostb
|description=CAGE_peak_1_at_Ostb_5end
|association_with_transcript=-122bp_to_ENSMUST00000065894,NM_178933,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=330962 | |EntrezGene=330962 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=219 | |||
|TSSclassifier=NA | |||
|UniProt=Q80WK2 | |UniProt=Q80WK2 | ||
|association_with_transcript=-122bp_to_ENSMUST00000065894,NM_178933,uc009qdg.1_5end | |||
|cluster_id=chr9:65270702..65270717,- | |||
|description=CAGE_peak_1_at_Ostb_5end | |||
|id=chr9:65270702..65270717,- | |||
|ontology_enrichment_celltype=CL:0000239!3.92e-07!6;CL:0000677!3.92e-07!6;CL:0000212!3.92e-07!6;CL:0000584!3.92e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.24e-09,6;CL:0000677,1.24e-09,6;CL:0000584,1.24e-09,6;CL:0000075,4.24e-08,7;CL:0002563,1.13e-07,9;CL:0002251,1.13e-07,9;CL:0000066,1.65e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.36e-15!43;UBERON:0005409!1.38e-13!59;UBERON:0000344!1.05e-12!15;UBERON:0001242!9.97e-11!13;UBERON:0000060!9.97e-11!13;UBERON:0001262!9.97e-11!13;UBERON:0004786!9.97e-11!13;UBERON:0001007!4.42e-08!128;UBERON:0001555!4.42e-08!128;UBERON:0007026!4.42e-08!128;UBERON:0004923!5.84e-08!24;UBERON:0004119!1.01e-07!130;UBERON:0000925!1.01e-07!130;UBERON:0006595!1.01e-07!130;UBERON:0004921!4.27e-07!126;UBERON:0004185!4.27e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.41e-29,31;UBERON:0005409,3.83e-19,47;UBERON:0000344,3.18e-16,15;UBERON:0001242,2.08e-13,13;UBERON:0001262,2.08e-13,13;UBERON:0004786,2.08e-13,13;UBERON:0001007,7.05e-13,116;UBERON:0001555,7.05e-13,116;UBERON:0007026,7.05e-13,116;UBERON:0004119,1.83e-12,118;UBERON:0000925,1.83e-12,118;UBERON:0006595,1.83e-12,118;UBERON:0004921,2.64e-11,114;UBERON:0004923,4.17e-10,24;UBERON:0009854,7.49e-08,23;UBERON:0009856,7.49e-08,23;UBERON:0003350,1.13e-07,9;UBERON:0004808,1.13e-07,9;UBERON:0001277,1.13e-07,9;UBERON:0002108,1.20e-07,4;UBERON:0002107,5.99e-07,22;UBERON:0007499,5.99e-07,22;UBERON:0006925,5.99e-07,22;UBERON:0009497,5.99e-07,22;UBERON:0000015,5.99e-07,22;UBERON:0002423,5.99e-07,22;UBERON:0006235,5.99e-07,22;UBERON:0008835,5.99e-07,22;UBERON:0003894,5.99e-07,22;UBERON:0004161,5.99e-07,22;UBERON:0008836,5.99e-07,22 | |||
|phase1_expression=0,261.382580321881,227.954618934158,69.2643043892641,80.1433167914156,16.2842893754533,26.1646157466989,0,0,0,0,0,0,0,0,0,0,0,0,0,7.48380953329414,0,0,107.354915694376,114.245821971451,286.541750093395,182.212324375289,154.923816301154,327.600375142789,191.290868487787,421.287970245079,0,0,0,0.288851619751275,1.16364251750945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30211938490693,13.599426674155,0,6.49776417447669,2.68816132258401,7.02222100658759,0,0,0,0,0,0,0,0,0,0,26.71902785426,0,0,0,0,0,0,0,0,4.44950941921873,0,0,0,0,0,39.1422698558057,0,0,155.317889566824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,137.784632504244,56.5924212659985,0,0,0.128867461322093,3.02525286935014,10.229390016864,19.403013863481,71.6538882932213,65.3854850254323,25.3848560888272,33.6236437749545,30.6093616777019,88.0843020481137,57.9249973664181,51.1793072263724,0,0.456994050438915,2.25415471346161,3.05476991767971,3.87904974335251,10.6606446233284,14.1649843158336,49.4493995731667,44.2736412512677,73.1745182056277,1.1858105083486,0,0,0,0,0,0,0.287696137450811,1.78348749452539,6.58947391651396,4.31304619582064,7.81495990103857,12.4815069245824,9.59799736199025,4.30553792452589,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0,0,0,0,0,8.78656196771952,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,78.9913067266895,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0.540026704109006,0.418176592028937,1.74690050996942,0.134864346384821,0.743881101528023,0,26.1822246049422,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.888986911206461,1.23621034343337,0.64183841918363,0.505394423527595,0.760437899670719,0.188626341386076,0.749132059759059,0.89635213366817,0.861532034334199,0,0.231768651889711,0.38581844092741,0.824171801606613,0.735994600671987,1.37147700954166,0.70990322463735,0.476872379894642,0.872078499793971,0.752875043322645,0.930760686808441,1.28049581010941,1.31534855718921,0.679020569229309,1.68342681497322,0.474540072496697,0.985044823755635,0.818462086339379,1.23949472948773,0.771626443924566,0,0.935726433781634,1.93383948643468,0,0,0 | |phase1_expression=0,261.382580321881,227.954618934158,69.2643043892641,80.1433167914156,16.2842893754533,26.1646157466989,0,0,0,0,0,0,0,0,0,0,0,0,0,7.48380953329414,0,0,107.354915694376,114.245821971451,286.541750093395,182.212324375289,154.923816301154,327.600375142789,191.290868487787,421.287970245079,0,0,0,0.288851619751275,1.16364251750945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30211938490693,13.599426674155,0,6.49776417447669,2.68816132258401,7.02222100658759,0,0,0,0,0,0,0,0,0,0,26.71902785426,0,0,0,0,0,0,0,0,4.44950941921873,0,0,0,0,0,39.1422698558057,0,0,155.317889566824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,137.784632504244,56.5924212659985,0,0,0.128867461322093,3.02525286935014,10.229390016864,19.403013863481,71.6538882932213,65.3854850254323,25.3848560888272,33.6236437749545,30.6093616777019,88.0843020481137,57.9249973664181,51.1793072263724,0,0.456994050438915,2.25415471346161,3.05476991767971,3.87904974335251,10.6606446233284,14.1649843158336,49.4493995731667,44.2736412512677,73.1745182056277,1.1858105083486,0,0,0,0,0,0,0.287696137450811,1.78348749452539,6.58947391651396,4.31304619582064,7.81495990103857,12.4815069245824,9.59799736199025,4.30553792452589,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0,0,0,0,0,8.78656196771952,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,78.9913067266895,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0.540026704109006,0.418176592028937,1.74690050996942,0.134864346384821,0.743881101528023,0,26.1822246049422,0,0,0,0,0,0,0.168956125490778,0,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.888986911206461,1.23621034343337,0.64183841918363,0.505394423527595,0.760437899670719,0.188626341386076,0.749132059759059,0.89635213366817,0.861532034334199,0,0.231768651889711,0.38581844092741,0.824171801606613,0.735994600671987,1.37147700954166,0.70990322463735,0.476872379894642,0.872078499793971,0.752875043322645,0.930760686808441,1.28049581010941,1.31534855718921,0.679020569229309,1.68342681497322,0.474540072496697,0.985044823755635,0.818462086339379,1.23949472948773,0.771626443924566,0,0.935726433781634,1.93383948643468,0,0,0 | ||
|short_description=p1@Ostb | |||
}} | }} |
Latest revision as of 00:21, 27 September 2015
Short description: | p1@Ostb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ostb_5end |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | -122bp_to_ENSMUST00000065894, NM_178933, uc009qdg.1_5end |
EntrezGene: | Ostb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.24e-09 | 6 |
gut absorptive cell | 1.24e-09 | 6 |
enterocyte | 1.24e-09 | 6 |
columnar/cuboidal epithelial cell | 4.24e-08 | 7 |
intestinal epithelial cell | 1.13e-07 | 9 |
epithelial cell of alimentary canal | 1.13e-07 | 9 |
epithelial cell | 1.65e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.41e-29 | 31 |
gastrointestinal system | 3.83e-19 | 47 |
mucosa | 3.18e-16 | 15 |
intestinal mucosa | 2.08e-13 | 13 |
wall of intestine | 2.08e-13 | 13 |
gastrointestinal system mucosa | 2.08e-13 | 13 |
digestive system | 7.05e-13 | 116 |
digestive tract | 7.05e-13 | 116 |
primitive gut | 7.05e-13 | 116 |
endoderm-derived structure | 1.83e-12 | 118 |
endoderm | 1.83e-12 | 118 |
presumptive endoderm | 1.83e-12 | 118 |
subdivision of digestive tract | 2.64e-11 | 114 |
organ component layer | 4.17e-10 | 24 |
digestive tract diverticulum | 7.49e-08 | 23 |
sac | 7.49e-08 | 23 |
epithelium of mucosa | 1.13e-07 | 9 |
gastrointestinal system epithelium | 1.13e-07 | 9 |
intestinal epithelium | 1.13e-07 | 9 |
small intestine | 1.20e-07 | 4 |
liver | 5.99e-07 | 22 |
epithelial sac | 5.99e-07 | 22 |
digestive gland | 5.99e-07 | 22 |
epithelium of foregut-midgut junction | 5.99e-07 | 22 |
anatomical boundary | 5.99e-07 | 22 |
hepatobiliary system | 5.99e-07 | 22 |
foregut-midgut junction | 5.99e-07 | 22 |
hepatic diverticulum | 5.99e-07 | 22 |
liver primordium | 5.99e-07 | 22 |
septum transversum | 5.99e-07 | 22 |
liver bud | 5.99e-07 | 22 |