FFCP PHASE1:Mm9::chr9:74885616..74885627,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:74885616..74885627,+
|short_description=p6@Arpp19
|description=CAGE_peak_6_at_Arpp19_5end
|association_with_transcript=0bp_to_ENSMUST00000167885_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=59046 | |EntrezGene=59046 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=P56212 | |UniProt=P56212 | ||
|association_with_transcript=0bp_to_ENSMUST00000167885_5end | |||
|cluster_id=chr9:74885616..74885627,+ | |||
|description=CAGE_peak_6_at_Arpp19_5end | |||
|id=chr9:74885616..74885627,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.72e-14,9;CL:0002251,7.72e-14,9;CL:0000239,4.31e-11,6;CL:0000677,4.31e-11,6;CL:0000584,4.31e-11,6;CL:0000075,1.82e-09,7;CL:0000066,2.91e-09,25;CL:0002076,6.29e-08,15;CL:0000223,1.92e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.12e-07!15;UBERON:0001242!8.10e-07!13;UBERON:0000060!8.10e-07!13;UBERON:0001262!8.10e-07!13;UBERON:0004786!8.10e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.70e-20,15;UBERON:0001242,2.23e-19,13;UBERON:0001262,2.23e-19,13;UBERON:0004786,2.23e-19,13;UBERON:0004923,6.15e-14,24;UBERON:0003350,7.72e-14,9;UBERON:0004808,7.72e-14,9;UBERON:0001277,7.72e-14,9;UBERON:0000485,3.75e-11,11;UBERON:0000160,1.55e-08,31 | |||
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| ||
|short_description=p6@Arpp19 | |||
}} | }} |
Latest revision as of 03:15, 27 September 2015
Short description: | p6@Arpp19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Arpp19_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000167885_5end |
EntrezGene: | Arpp19 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.72e-14 | 9 |
epithelial cell of alimentary canal | 7.72e-14 | 9 |
brush border epithelial cell | 4.31e-11 | 6 |
gut absorptive cell | 4.31e-11 | 6 |
enterocyte | 4.31e-11 | 6 |
columnar/cuboidal epithelial cell | 1.82e-09 | 7 |
epithelial cell | 2.91e-09 | 25 |
endo-epithelial cell | 6.29e-08 | 15 |
endodermal cell | 1.92e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.70e-20 | 15 |
intestinal mucosa | 2.23e-19 | 13 |
wall of intestine | 2.23e-19 | 13 |
gastrointestinal system mucosa | 2.23e-19 | 13 |
organ component layer | 6.15e-14 | 24 |
epithelium of mucosa | 7.72e-14 | 9 |
gastrointestinal system epithelium | 7.72e-14 | 9 |
intestinal epithelium | 7.72e-14 | 9 |
simple columnar epithelium | 3.75e-11 | 11 |
intestine | 1.55e-08 | 31 |