FFCP PHASE1:Mm9::chrX:7184234..7184253,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:7184234..7184253,+
|short_description=p1@Cacna1f
|description=CAGE_peak_1_at_Cacna1f_5end
|association_with_transcript=0bp_to_ENSMUST00000133637_5end
|Ent...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=54652 | |EntrezGene=54652 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=16 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C8Q4 | |UniProt=Q8C8Q4 | ||
|association_with_transcript=0bp_to_ENSMUST00000133637_5end | |||
|cluster_id=chrX:7184234..7184253,+ | |||
|description=CAGE_peak_1_at_Cacna1f_5end | |||
|id=chrX:7184234..7184253,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!5.06e-44!9;UBERON:0000019!5.06e-44!9;UBERON:0000047!5.06e-44!9;UBERON:0004088!5.06e-44!9;UBERON:0002104!5.06e-44!9;UBERON:0001456!5.06e-44!9;UBERON:0003072!5.06e-44!9;UBERON:0003071!5.06e-44!9;UBERON:0004128!5.06e-44!9;UBERON:0001444!4.38e-36!11;UBERON:0000020!4.18e-33!12;UBERON:0001032!4.18e-33!12;UBERON:0004456!4.18e-33!12;UBERON:0005085!1.39e-30!13;UBERON:0003056!3.37e-08!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.47e-48,9;UBERON:0000019,1.47e-48,9;UBERON:0000047,1.47e-48,9;UBERON:0010312,1.47e-48,9;UBERON:0004088,1.47e-48,9;UBERON:0002104,1.47e-48,9;UBERON:0001456,1.47e-48,9;UBERON:0003072,1.47e-48,9;UBERON:0004128,1.47e-48,9;UBERON:0003071,1.47e-48,9;UBERON:0001444,6.64e-40,11;UBERON:0000020,1.18e-36,12;UBERON:0001032,1.18e-36,12;UBERON:0004456,1.18e-36,12;UBERON:0000033,6.63e-34,13;UBERON:0005085,6.63e-34,13;UBERON:0007811,1.00e-12,36;UBERON:0000153,9.33e-11,43;UBERON:0003056,1.64e-09,49;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,49.6642779892079,0,0,0,0.90422890701429,2.85753296435577,6.79002717509704,6.74652416830048,112.535966271472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,49.6642779892079,0,0,0,0.90422890701429,2.85753296435577,6.79002717509704,6.74652416830048,112.535966271472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p1@Cacna1f | |||
}} | }} |
Latest revision as of 00:25, 2 October 2015
Short description: | p1@Cacna1f |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cacna1f_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | 0bp_to_ENSMUST00000133637_5end |
EntrezGene: | Cacna1f |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.47e-48 | 9 |
camera-type eye | 1.47e-48 | 9 |
simple eye | 1.47e-48 | 9 |
immature eye | 1.47e-48 | 9 |
ocular region | 1.47e-48 | 9 |
visual system | 1.47e-48 | 9 |
face | 1.47e-48 | 9 |
optic cup | 1.47e-48 | 9 |
optic vesicle | 1.47e-48 | 9 |
eye primordium | 1.47e-48 | 9 |
subdivision of head | 6.64e-40 | 11 |
sense organ | 1.18e-36 | 12 |
sensory system | 1.18e-36 | 12 |
entire sense organ system | 1.18e-36 | 12 |
head | 6.63e-34 | 13 |
ectodermal placode | 6.63e-34 | 13 |
craniocervical region | 1.00e-12 | 36 |
anterior region of body | 9.33e-11 | 43 |
pre-chordal neural plate | 1.64e-09 | 49 |
neurectoderm | 2.08e-07 | 64 |
neural plate | 2.08e-07 | 64 |
presumptive neural plate | 2.08e-07 | 64 |