UBERON:0002209: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0002209
|name=fibrous joint
|namespace=
|def="Nonsynovial joint in which the articulating bones or cartilages are connected by ligaments. Examples: sag...") |
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{{UBERON | {{UBERON | ||
| | |alt_id=UBERON:FMA_7492-MA_0000321 | ||
|comment=This class was created automatically from a combination of ontologies | |comment=This class was created automatically from a combination of ontologies | ||
|created_by= | |created_by= | ||
| | |def="Nonsynovial joint in which the articulating bones or cartilages are connected by ligaments. Examples: sagittal suture, inferior tibiofibular syndesmosis, gomphosis.[FMA]" [FMA:FMA, Wikipedia:Fibrous_joint] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0002209 | |||
|is_a=UBERON:0011134 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=fibrous joint | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |preceded_by= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "A joint where fibrous tissue such as ligament connects two calcified tissues.[TAO]" xsd:string | |||
|subset=uberon_slim;;vertebrate_core | |||
|synonym="articulatio fibrosa" EXACT [];;"junctura fibrosa" RELATED LATIN [Wikipedia:Fibrous_joint] | |||
|union_of= | |||
|xref=AEO:0000178;;EHDAA2:0003178;;FMA:7492;;MA:0000321;;SCTID:37772004;;TAO:0005156;;ZFA:0005156 | |||
}} | }} | ||
Latest revision as of 17:28, 12 September 2014
| Name: | fibrous joint | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Nonsynovial joint in which the articulating bones or cartilages are connected by ligaments. Examples: sagittal suture, inferior tibiofibular syndesmosis, gomphosis.[FMA]" [FMA:FMA, Wikipedia:Fibrous_joint] | ||
| Xrefs: |
| ||
| Synonyms: |
"articulatio fibrosa" EXACT [] "junctura fibrosa" RELATED LATIN [Wikipedia:Fibrous_joint] | ||
| Comments: | This class was created automatically from a combination of ontologies | ||
| Alt_id: | UBERON:FMA_7492-MA_0000321 | ||
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0011134(nonsynovial joint) |
|---|
Children
| is a: | UBERON:0002216 (symphysis) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11248-116E6 (Anulus Pulposus Cell, donor1)
- 11252-116F1 (Nucleus Pulposus Cell, donor1)
- 11409-118E5 (Nucleus Pulposus Cell, donor2)
- 11462-119B4 (Nucleus Pulposus Cell, donor3)
- 11463-119B5 (Anulus Pulposus Cell, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002209 (fibrous joint), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.25e-162 | FFCP PHASE2:Hg19::chr3:174737010..174737023,+#_97c3c2b4399dd3036f35d9daf1a82118 | p@chr3:174737010..174737023, + |
| 1.25e-162 | FFCP PHASE1:Hg19::chr3:174737010..174737023,+#_97c3c2b4399dd3036f35d9daf1a82118 | p@chr3:174737010..174737023, + |
| 3.92e-140 | FFCP PHASE1:Hg19::chr20:21687193..21687206,+#_b133acb2cbd5aa0860004fa7c89a51e5 | p4@PAX1 |
| 3.92e-140 | FFCP PHASE2:Hg19::chr20:21687193..21687206,+#_b133acb2cbd5aa0860004fa7c89a51e5 | p4@PAX1 |
| 4.22e-99 | FFCP PHASE2:Hg19::chr5:30104176..30104187,-#_d4a91af27dde21d3b52e11166c84d038 | p@chr5:30104176..30104187, - |
| 4.22e-99 | FFCP PHASE1:Hg19::chr5:30104176..30104187,-#_d4a91af27dde21d3b52e11166c84d038 | p@chr5:30104176..30104187, - |
| 1.06e-78 | FFCP PHASE1:Hg19::chr4:13546130..13546145,-#_b32397f35e1dfd0522901f1d76bedca2 | p4@NKX3-2 |
| 1.06e-78 | FFCP PHASE2:Hg19::chr4:13546130..13546145,-#_b32397f35e1dfd0522901f1d76bedca2 | p4@NKX3-2 |
| 2.52e-71 | FFCP PHASE2:Hg19::chr9:114135497..114135526,-#_943f789c944b1dd3320c090882de16eb | p@chr9:114135497..114135526, - |
| 2.52e-71 | FFCP PHASE1:Hg19::chr9:114135497..114135526,-#_943f789c944b1dd3320c090882de16eb | p@chr9:114135497..114135526, - |
| 7.4e-71 | FFCP PHASE2:Hg19::chr2:241897125..241897142,-#_817ae6c73dab2beed86ba196776e31e3 | p@chr2:241897125..241897142, - |
| 7.4e-71 | FFCP PHASE1:Hg19::chr2:241897125..241897142,-#_817ae6c73dab2beed86ba196776e31e3 | p@chr2:241897125..241897142, - |
| 6.33e-70 | FFCP PHASE1:Hg19::chr3:80727046..80727051,-#_0e3232115b5bc213671b37a11c781c4c | p@chr3:80727046..80727051, - |
| 6.33e-70 | FFCP PHASE2:Hg19::chr3:80727046..80727051,-#_0e3232115b5bc213671b37a11c781c4c | p@chr3:80727046..80727051, - |
| 4.8e-67 | FFCP PHASE1:Hg19::chr2:242004292..242004308,+#_bb09a296de4ba598e6fcac7667259719 | p15@SNED1 |
| 4.8e-67 | FFCP PHASE2:Hg19::chr2:242004292..242004308,+#_bb09a296de4ba598e6fcac7667259719 | p15@SNED1 |
| 1.24e-66 | FFCP PHASE2:Hg19::chr1:19811132..19811155,-#_dd1a06a21ddee501cfd0c964dcf2e54e | p20@CAPZB |
| 1.24e-66 | FFCP PHASE1:Hg19::chr1:19811132..19811155,-#_dd1a06a21ddee501cfd0c964dcf2e54e | p20@CAPZB |
| 1.26e-62 | FFCP PHASE2:Hg19::chr1:19778678..19778689,-#_db6625ce33c036a5e19d249a7a72558f | p@chr1:19778678..19778689, - |
| 1.26e-62 | FFCP PHASE1:Hg19::chr1:19778678..19778689,-#_db6625ce33c036a5e19d249a7a72558f | p@chr1:19778678..19778689, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:241897189..241897221,-#_bd546cf68e2026bf24e1dde50b52485c | p@chr2:241897189..241897221, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr2:241897189..241897221,-#_bd546cf68e2026bf24e1dde50b52485c | p@chr2:241897189..241897221, - |
| 1.55e-57 | FFCP PHASE2:Hg19::chr14:23574186..23574212,-#_73b103b9b554271685a41ca6dbbd3a38 | p1@uc010aki.1 |
| 1.55e-57 | FFCP PHASE1:Hg19::chr14:23574186..23574212,-#_73b103b9b554271685a41ca6dbbd3a38 | p1@uc010aki.1 |
| 4.09e-56 | FFCP PHASE2:Hg19::chr14:61190754..61190776,-#_997ae7eb844b1c581c82e24d53b6541b | p6@SIX4 |
| 4.09e-56 | FFCP PHASE1:Hg19::chr14:61190754..61190776,-#_997ae7eb844b1c581c82e24d53b6541b | p6@SIX4 |
| 3.74e-53 | FFCP PHASE2:Hg19::chr14:23574164..23574179,-#_61bc682460c3b1bb1a21ab2be2221683 | p3@uc010aki.1 |
| 3.74e-53 | FFCP PHASE1:Hg19::chr14:23574164..23574179,-#_61bc682460c3b1bb1a21ab2be2221683 | p3@uc010aki.1 |
| 1.15e-51 | FFCP PHASE2:Hg19::chr20:21687260..21687270,+#_28cc9cbb91c3ce9c89eece65cc5bca02 | p3@PAX1 |
| 1.15e-51 | FFCP PHASE1:Hg19::chr20:21687260..21687270,+#_28cc9cbb91c3ce9c89eece65cc5bca02 | p3@PAX1 |
| 2.3e-51 | FFCP PHASE2:Hg19::chr10:81923378..81923389,-#_8ead19755d0299d1989d0a463ec9864d | p@chr10:81923378..81923389, - |
| 2.3e-51 | FFCP PHASE1:Hg19::chr10:81923378..81923389,-#_8ead19755d0299d1989d0a463ec9864d | p@chr10:81923378..81923389, - |
| 3.24e-51 | FFCP PHASE2:Hg19::chr2:12248310..12248334,-#_f35406f7e61c84b6666cc7e9f740a90f | p@chr2:12248310..12248334, - |
| 3.24e-51 | FFCP PHASE1:Hg19::chr2:12248310..12248334,-#_f35406f7e61c84b6666cc7e9f740a90f | p@chr2:12248310..12248334, - |
| 8.0e-51 | FFCP PHASE1:Hg19::chr7:18832913..18832946,+#_c3f09dc42ae4fb9715e4184744322aff | p19@HDAC9 |
| 8.0e-51 | FFCP PHASE2:Hg19::chr7:18832913..18832946,+#_c3f09dc42ae4fb9715e4184744322aff | p19@HDAC9 |
| 5.06e-49 | FFCP PHASE1:Hg19::chr7:158224707..158224729,-#_5770d593985244c978a19bf8d4ffa31e | p@chr7:158224707..158224729, - |
| 5.06e-49 | FFCP PHASE2:Hg19::chr7:158224707..158224729,-#_5770d593985244c978a19bf8d4ffa31e | p@chr7:158224707..158224729, - |
| 5.24e-48 | FFCP PHASE1:Hg19::chr1:65888177..65888194,+#_fc0a497cbb5b7af56006222672e1d8aa | p@chr1:65888177..65888194, + |
| 5.24e-48 | FFCP PHASE2:Hg19::chr1:65888177..65888194,+#_fc0a497cbb5b7af56006222672e1d8aa | p@chr1:65888177..65888194, + |
| 2.98e-45 | FFCP PHASE2:Hg19::chr4:13546583..13546593,-#_5db32051feff2022916f0d49823009f8 | p3@NKX3-2 |
| 2.98e-45 | FFCP PHASE1:Hg19::chr4:13546583..13546593,-#_5db32051feff2022916f0d49823009f8 | p3@NKX3-2 |
| 2.92e-44 | FFCP PHASE2:Hg19::chr1:78695274..78695292,+#_57b3b290abc5c30fd7bb0b1a21ea9676 | p1@MGC27382 |
| 2.92e-44 | FFCP PHASE1:Hg19::chr1:78695274..78695292,+#_57b3b290abc5c30fd7bb0b1a21ea9676 | p1@MGC27382 |
| 1.71e-43 | FFCP PHASE1:Hg19::chr7:18832834..18832859,+#_6212ce8dc50f8ffdad1c366ac155ca03 | p18@HDAC9 |
| 1.71e-43 | FFCP PHASE2:Hg19::chr7:18832834..18832859,+#_6212ce8dc50f8ffdad1c366ac155ca03 | p18@HDAC9 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr13:24914614..24914622,-#_4c99edd18e97e030369b512decc9a3ff | p@chr13:24914614..24914622, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr9:33028063..33028067,-#_4c99edd18e97e030369b512decc9a3ff | p@chr9:33028063..33028067, - |
| 1.48e-40 | FFCP PHASE1:Hg19::chr9:33028063..33028067,-#_4c99edd18e97e030369b512decc9a3ff | p@chr9:33028063..33028067, - |
| 1.48e-40 | FFCP PHASE1:Hg19::chr13:24914614..24914622,-#_4c99edd18e97e030369b512decc9a3ff | p@chr13:24914614..24914622, - |
| 1.64e-40 | FFCP PHASE2:Hg19::chr20:21686317..21686350,+#_0c87e74d31c2f43632de138a67fbdd37 | p1@PAX1 |
| 1.64e-40 | FFCP PHASE1:Hg19::chr20:21686317..21686350,+#_0c87e74d31c2f43632de138a67fbdd37 | p1@PAX1 |
| 1.81e-40 | FFCP PHASE2:Hg19::chr1:78769549..78769554,+#_a2b2f680044a0ccf559b3f2ec086c5ba | p5@PTGFR |
| 1.81e-40 | FFCP PHASE1:Hg19::chr1:78769549..78769554,+#_a2b2f680044a0ccf559b3f2ec086c5ba | p5@PTGFR |
| 2.13e-40 | FFCP PHASE1:Hg19::chr2:241897363..241897398,+#_10c506dedb3b323bd4284858cb89784f | p@chr2:241897363..241897398, + |
| 2.13e-40 | FFCP PHASE2:Hg19::chr2:241897363..241897398,+#_10c506dedb3b323bd4284858cb89784f | p@chr2:241897363..241897398, + |
| 3.04e-39 | FFCP PHASE2:Hg19::chr20:21686290..21686311,+#_808552ab061bb57971a3235f44927efd | p2@PAX1 |
| 3.04e-39 | FFCP PHASE1:Hg19::chr20:21686290..21686311,+#_808552ab061bb57971a3235f44927efd | p2@PAX1 |
| 7.19e-39 | FFCP PHASE2:Hg19::chr7:18832759..18832786,+#_f8819db1100ba092b7b0128acf5b735b | p16@HDAC9 |
| 7.19e-39 | FFCP PHASE2:Hg19::chr5:140887761..140887777,+#_f8819db1100ba092b7b0128acf5b735b | p@chr5:140887761..140887777, + |
| 7.19e-39 | FFCP PHASE1:Hg19::chr5:140887761..140887777,+#_f8819db1100ba092b7b0128acf5b735b | p@chr5:140887761..140887777, + |
| 7.19e-39 | FFCP PHASE1:Hg19::chr7:18832759..18832786,+#_f8819db1100ba092b7b0128acf5b735b | p16@HDAC9 |
| 1.24e-38 | FFCP PHASE2:Hg19::chr4:77068930..77068959,-#_c60316b43551ef9b3dba3e9c9f7e884d | p4@NUP54 |
| 1.24e-38 | FFCP PHASE1:Hg19::chr4:77068930..77068959,-#_c60316b43551ef9b3dba3e9c9f7e884d | p4@NUP54 |
| 2.08e-38 | FFCP PHASE1:Hg19::chr2:241938405..241938416,+#_7cb91a2f04291a94ed88560b1e30627b | p@chr2:241938405..241938416, + |
| 2.08e-38 | FFCP PHASE2:Hg19::chr2:241938405..241938416,+#_7cb91a2f04291a94ed88560b1e30627b | p@chr2:241938405..241938416, + |
| 3.34e-38 | FFCP PHASE2:Hg19::chr4:13546632..13546662,-#_a7232e47d5ee4bf91a30257af5555a44 | p1@NKX3-2 |
| 3.34e-38 | FFCP PHASE1:Hg19::chr4:13546632..13546662,-#_a7232e47d5ee4bf91a30257af5555a44 | p1@NKX3-2 |
| 3.68e-38 | FFCP PHASE1:Hg19::chr6:158490457..158490470,+#_7ad0a4c103d0cbdb63aa6ce00839b2b1 | p10@SYNJ2 |
| 3.68e-38 | FFCP PHASE2:Hg19::chr6:158490457..158490470,+#_7ad0a4c103d0cbdb63aa6ce00839b2b1 | p10@SYNJ2 |
| 5.39e-38 | FFCP PHASE2:Hg19::chr9:16138889..16138902,-#_1e71b5020df7f70a407233920d4695d8 | p@chr9:16138889..16138902, - |
| 5.39e-38 | FFCP PHASE1:Hg19::chr9:16138889..16138902,-#_1e71b5020df7f70a407233920d4695d8 | p@chr9:16138889..16138902, - |
| 8.66e-38 | FFCP PHASE2:Hg19::chr8:78311303..78311320,+#_951d684e19993a8487814c18c24cf57c | p2@ENST00000518706 |
| 8.66e-38 | FFCP PHASE1:Hg19::chr8:78311303..78311320,+#_951d684e19993a8487814c18c24cf57c | p2@ENST00000518706 |
| 2.96e-37 | FFCP PHASE2:Hg19::chr21:39705383..39705394,-#_2344995fe6615a49a501366a7c6dc946 | p1@ENST00000436845 |
| 2.96e-37 | FFCP PHASE1:Hg19::chr21:39705383..39705394,-#_2344995fe6615a49a501366a7c6dc946 | p1@ENST00000436845 |
| 6.92e-37 | FFCP PHASE2:Hg19::chr9:123239747..123239765,-#_d4d0f172d56b13c11f28558d8963fd1c | p12@CDK5RAP2 |
| 6.92e-37 | FFCP PHASE1:Hg19::chr9:123239747..123239765,-#_d4d0f172d56b13c11f28558d8963fd1c | p12@CDK5RAP2 |
| 3.28e-36 | FFCP PHASE2:Hg19::chr1:78695298..78695311,+#_491de162d6c3620a626e6ca278c8ced0 | p1@ENST00000413519 |
| 3.28e-36 | FFCP PHASE1:Hg19::chr1:78695298..78695311,+#_491de162d6c3620a626e6ca278c8ced0 | p1@ENST00000413519 |
| 9.62e-35 | FFCP PHASE2:Hg19::chr14:37126814..37126834,+#_71a1b329d6b3d06b32c69f8252128fc0 | p4@PAX9 |
| 9.62e-35 | FFCP PHASE1:Hg19::chr14:37126814..37126834,+#_71a1b329d6b3d06b32c69f8252128fc0 | p4@PAX9 |
| 1.8e-34 | FFCP PHASE1:Hg19::chr7:100202784..100202796,-#_d3b8b37c984ff7058b0569920008a421 | p@chr7:100202784..100202796, - |
| 1.8e-34 | FFCP PHASE2:Hg19::chr7:100202784..100202796,-#_d3b8b37c984ff7058b0569920008a421 | p@chr7:100202784..100202796, - |
| 3.69e-34 | FFCP PHASE2:Hg19::chr12:54422268..54422278,+#_ec305ca03130800e3422db080110249d | p8@HOXC6 |
| 3.69e-34 | FFCP PHASE1:Hg19::chr12:54422268..54422278,+#_ec305ca03130800e3422db080110249d | p8@HOXC6 |
| 5.52e-34 | FFCP PHASE2:Hg19::chr11:60610073..60610090,+#_62226bfdf550d8135c5d104db7f86f7f | p6@CCDC86 |
| 5.52e-34 | FFCP PHASE1:Hg19::chr11:60610073..60610090,+#_62226bfdf550d8135c5d104db7f86f7f | p6@CCDC86 |
| 1.43e-33 | FFCP PHASE2:Hg19::chr20:21695435..21695452,+#_b99d6e76b9fa3251f1597e09d36c5142 | p@chr20:21695435..21695452, + |
| 1.43e-33 | FFCP PHASE1:Hg19::chr20:21695435..21695452,+#_b99d6e76b9fa3251f1597e09d36c5142 | p@chr20:21695435..21695452, + |
| 5.36e-33 | FFCP PHASE2:Hg19::chr16:70795228..70795237,+#_121249d17416a5dadf1aab43dcbb1676 | p@chr16:70795228..70795237, + |
| 5.36e-33 | FFCP PHASE1:Hg19::chr16:70795228..70795237,+#_121249d17416a5dadf1aab43dcbb1676 | p@chr16:70795228..70795237, + |
| 1.05e-32 | FFCP PHASE1:Hg19::chr3:158384350..158384362,-#_e01f08eda641490938327fce92342d3a | p@chr3:158384350..158384362, - |
| 1.05e-32 | FFCP PHASE2:Hg19::chr3:158384350..158384362,-#_e01f08eda641490938327fce92342d3a | p@chr3:158384350..158384362, - |
| 1.7e-32 | FFCP PHASE2:Hg19::chr2:158345440..158345449,-#_d37ecad399982c37d6d80926cbbf540d | p9@CYTIP |
| 1.7e-32 | FFCP PHASE1:Hg19::chr2:158345440..158345449,-#_d37ecad399982c37d6d80926cbbf540d | p9@CYTIP |
| 2.34e-32 | FFCP PHASE2:Hg19::chr18:12012068..12012098,+#_f443068fcfaa744da17b0d89733c439d | p@chr18:12012068..12012098, + |
| 2.34e-32 | FFCP PHASE1:Hg19::chr18:12012068..12012098,+#_f443068fcfaa744da17b0d89733c439d | p@chr18:12012068..12012098, + |
| 2.79e-31 | FFCP PHASE1:Hg19::chr14:37126870..37126882,+#_f22807246889562b9c3dd309c17f27e2 | p1@ENST00000555639 |
| 2.79e-31 | FFCP PHASE2:Hg19::chr14:37126870..37126882,+#_f22807246889562b9c3dd309c17f27e2 | p1@ENST00000555639 |
Property "Property value" (as page type) with input value "UBPROP:0000001 "A joint where fibrous tissue such as ligament connects two calcified tissues.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
