UBERON:0004695: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0004695
|name=arterial system smooth muscle
|namespace=
|def="A portion of smooth muscle tissue that is part of an arterial system [Obol]." [OBOL:autom...") |
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="A portion of smooth muscle tissue that is part of an arterial system [Obol]." [OBOL:automatic] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0004695 | |||
|is_a=UBERON:0001135 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=arterial system smooth muscle | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0004572 | |part_of=UBERON:0004572 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|subset= | |||
|synonym= | |||
|union_of= | |||
|xref=MA:0000704 | |||
}} | }} | ||
Latest revision as of 17:47, 12 September 2014
| Name: | arterial system smooth muscle | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A portion of smooth muscle tissue that is part of an arterial system [Obol]." [OBOL:automatic] | ||
| Xrefs: |
|
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001135(smooth muscle tissue) |
|---|---|
| part_of: | UBERON:0004572(arterial system) |
Children
| is a: | UBERON:0002111 (artery smooth muscle tissue),UBERON:0004178 (aorta smooth muscle tissue) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11283-116I5 (Smooth Muscle Cells - Aortic, donor1)
- 11297-117B1 (Canine Aortic Smooth Muscle cells, donor1)
- 11298-117B2 (Chicken Aortic Smooth Muscle cells, donor1)
- 11299-117B3 (Mouse Aortic Smooth Muscle cells, donor1)
- 11300-117B4 (Rat Aortic Smooth Muscle cells, donor1)
- 11325-117E2 (Canine hepatocytes, donor2)
- 11360-117I1 (Smooth Muscle Cells - Aortic, donor2)
- 11374-118A6 (Canine Aortic Smooth Muscle cells, donor2)
... further results Mouse (Mus musculus)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11283-116I5 (Smooth Muscle Cells - Aortic, donor1)
- 11297-117B1 (Canine Aortic Smooth Muscle cells, donor1)
- 11298-117B2 (Chicken Aortic Smooth Muscle cells, donor1)
- 11299-117B3 (Mouse Aortic Smooth Muscle cells, donor1)
- 11300-117B4 (Rat Aortic Smooth Muscle cells, donor1)
- 11325-117E2 (Canine hepatocytes, donor2)
- 11360-117I1 (Smooth Muscle Cells - Aortic, donor2)
- 11374-118A6 (Canine Aortic Smooth Muscle cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004695 (arterial system smooth muscle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.58e-86 | FFCP PHASE1:Mm9::chr17:87574327..87574332,+#_fc0671a8fd5b7d445a15c843758c1e1b | p@chr17:87574327..87574332, + |
| 1.58e-86 | FFCP PHASE2:Mm9::chr11:50416871..50416882,+#_fc0671a8fd5b7d445a15c843758c1e1b | p5@Adamts2 |
| 1.58e-86 | FFCP PHASE1:Mm9::chr2:112043522..112043530,-#_fc0671a8fd5b7d445a15c843758c1e1b | p@chr2:112043522..112043530, - |
| 1.58e-86 | FFCP PHASE2:Mm9::chr2:178190171..178190178,+#_fc0671a8fd5b7d445a15c843758c1e1b | p@chr2:178190171..178190178, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr2:178190171..178190178,+#_fc0671a8fd5b7d445a15c843758c1e1b | p@chr2:178190171..178190178, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chrX:160839744..160839754,+#_fc0671a8fd5b7d445a15c843758c1e1b | p@chrX:160839744..160839754, + |
| 1.58e-86 | FFCP PHASE2:Mm9::chr2:112043522..112043530,-#_fc0671a8fd5b7d445a15c843758c1e1b | p@chr2:112043522..112043530, - |
| 1.58e-86 | FFCP PHASE1:Mm9::chr8:69228447..69228492,+#_fc0671a8fd5b7d445a15c843758c1e1b | p@chr8:69228447..69228492, + |
| 1.58e-86 | FFCP PHASE2:Mm9::chr8:69228447..69228492,+#_fc0671a8fd5b7d445a15c843758c1e1b | p@chr8:69228447..69228492, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr11:50416871..50416882,+#_fc0671a8fd5b7d445a15c843758c1e1b | p5@Adamts2 |
| 1.58e-86 | FFCP PHASE1:Mm9::chr17:14827154..14827169,-#_fc0671a8fd5b7d445a15c843758c1e1b | p@chr17:14827154..14827169, - |
| 1.58e-86 | FFCP PHASE2:Mm9::chrX:160839744..160839754,+#_fc0671a8fd5b7d445a15c843758c1e1b | p@chrX:160839744..160839754, + |
| 1.58e-86 | FFCP PHASE2:Mm9::chr17:87574327..87574332,+#_fc0671a8fd5b7d445a15c843758c1e1b | p@chr17:87574327..87574332, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr17:14802633..14802637,-#_fc0671a8fd5b7d445a15c843758c1e1b | p@chr17:14802633..14802637, - |
| 1.58e-86 | FFCP PHASE2:Mm9::chr17:14827154..14827169,-#_fc0671a8fd5b7d445a15c843758c1e1b | p@chr17:14827154..14827169, - |
| 1.58e-86 | FFCP PHASE2:Mm9::chr17:14802633..14802637,-#_fc0671a8fd5b7d445a15c843758c1e1b | p@chr17:14802633..14802637, - |
| 5.79e-79 | FFCP PHASE1:Hg19::chr1:110429102..110429103,+#_8cddd71bc9137c773fbe80ca70422721 | p@chr1:110429102..110429103, + |
| 5.79e-79 | FFCP PHASE2:Hg19::chr1:110429102..110429103,+#_8cddd71bc9137c773fbe80ca70422721 | p@chr1:110429102..110429103, + |
| 1.33e-65 | FFCP PHASE1:Mm9::chrX:160840048..160840057,+#_224459c825ff8245403a990f781a39f4 | p@chrX:160840048..160840057, + |
| 1.33e-65 | FFCP PHASE1:Mm9::chr6:128920492..128920498,-#_224459c825ff8245403a990f781a39f4 | p@chr6:128920492..128920498, - |
| 1.33e-65 | FFCP PHASE1:Mm9::chr11:118164535..118164544,-#_224459c825ff8245403a990f781a39f4 | p@chr11:118164535..118164544, - |
| 1.33e-65 | FFCP PHASE1:Mm9::chr8:69221163..69221172,+#_224459c825ff8245403a990f781a39f4 | p6@Npy1r |
| 1.33e-65 | FFCP PHASE2:Mm9::chr11:118164535..118164544,-#_224459c825ff8245403a990f781a39f4 | p@chr11:118164535..118164544, - |
| 1.33e-65 | FFCP PHASE2:Mm9::chr8:69221163..69221172,+#_224459c825ff8245403a990f781a39f4 | p6@Npy1r |
| 1.33e-65 | FFCP PHASE2:Mm9::chrX:160840025..160840037,+#_224459c825ff8245403a990f781a39f4 | p@chrX:160840025..160840037, + |
| 1.33e-65 | FFCP PHASE1:Mm9::chr17:71340031..71340044,-#_224459c825ff8245403a990f781a39f4 | p5@Myl12b |
| 1.33e-65 | FFCP PHASE2:Mm9::chr6:128920492..128920498,-#_224459c825ff8245403a990f781a39f4 | p@chr6:128920492..128920498, - |
| 1.33e-65 | FFCP PHASE2:Mm9::chrX:160840048..160840057,+#_224459c825ff8245403a990f781a39f4 | p@chrX:160840048..160840057, + |
| 1.33e-65 | FFCP PHASE1:Mm9::chrX:160840025..160840037,+#_224459c825ff8245403a990f781a39f4 | p@chrX:160840025..160840037, + |
| 1.33e-65 | FFCP PHASE2:Mm9::chr17:71340031..71340044,-#_224459c825ff8245403a990f781a39f4 | p5@Myl12b |
| 2.21e-65 | FFCP PHASE1:Mm9::chr4:145000183..145000220,+#_737a8fca3ad03046af0309014cc68aa1 | p1@ENSMUST00000150529 |
| 2.21e-65 | FFCP PHASE2:Mm9::chr4:145000183..145000220,+#_737a8fca3ad03046af0309014cc68aa1 | p1@ENSMUST00000150529 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:127573425..127573432,+#_72b2d02aede20601dbbff13f78abe6e0 | p12@Gpr39 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:78907550..78907557,+#_72b2d02aede20601dbbff13f78abe6e0 | p8@Vit |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:33816181..33816195,-#_72b2d02aede20601dbbff13f78abe6e0 | p@chr10:33816181..33816195, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:160839012..160839023,+#_72b2d02aede20601dbbff13f78abe6e0 | p@chrX:160839012..160839023, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:160811352..160811356,-#_72b2d02aede20601dbbff13f78abe6e0 | p@chrX:160811352..160811356, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:14817013..14817022,-#_72b2d02aede20601dbbff13f78abe6e0 | p@chr17:14817013..14817022, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:96946110..96946113,+#_72b2d02aede20601dbbff13f78abe6e0 | p@chr10:96946110..96946113, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr10:33816181..33816195,-#_72b2d02aede20601dbbff13f78abe6e0 | p@chr10:33816181..33816195, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:87544959..87544962,+#_72b2d02aede20601dbbff13f78abe6e0 | p@chr17:87544959..87544962, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:78907550..78907557,+#_72b2d02aede20601dbbff13f78abe6e0 | p8@Vit |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:24251697..24251707,+#_72b2d02aede20601dbbff13f78abe6e0 | p@chr14:24251697..24251707, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:14817013..14817022,-#_72b2d02aede20601dbbff13f78abe6e0 | p@chr17:14817013..14817022, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:160839012..160839023,+#_72b2d02aede20601dbbff13f78abe6e0 | p@chrX:160839012..160839023, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:127573425..127573432,+#_72b2d02aede20601dbbff13f78abe6e0 | p12@Gpr39 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:69857155..69857159,+#_72b2d02aede20601dbbff13f78abe6e0 | p@chr8:69857155..69857159, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:69857155..69857159,+#_72b2d02aede20601dbbff13f78abe6e0 | p@chr8:69857155..69857159, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:160811352..160811356,-#_72b2d02aede20601dbbff13f78abe6e0 | p@chrX:160811352..160811356, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr10:96946110..96946113,+#_72b2d02aede20601dbbff13f78abe6e0 | p@chr10:96946110..96946113, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:24251697..24251707,+#_72b2d02aede20601dbbff13f78abe6e0 | p@chr14:24251697..24251707, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:87544959..87544962,+#_72b2d02aede20601dbbff13f78abe6e0 | p@chr17:87544959..87544962, + |
| 1.26e-55 | FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_431360fbe643e45e20c395cde0be6491 | p@chr6:53359400..53359406, + |
| 1.26e-55 | FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_431360fbe643e45e20c395cde0be6491 | p@chr6:53359400..53359406, + |
| 4.9e-53 | FFCP PHASE1:Mm9::chr8:69221150..69221161,+#_00d187047bebb153057200de385c7396 | p5@Npy1r |
| 4.9e-53 | FFCP PHASE1:Mm9::chr10:67598037..67598049,-#_00d187047bebb153057200de385c7396 | p@chr10:67598037..67598049, - |
| 4.9e-53 | FFCP PHASE2:Mm9::chr14:24251717..24251731,+#_00d187047bebb153057200de385c7396 | p@chr14:24251717..24251731, + |
| 4.9e-53 | FFCP PHASE2:Mm9::chr8:69221150..69221161,+#_00d187047bebb153057200de385c7396 | p5@Npy1r |
| 4.9e-53 | FFCP PHASE1:Mm9::chr13:113253807..113253846,+#_00d187047bebb153057200de385c7396 | p4@Il6st |
| 4.9e-53 | FFCP PHASE2:Mm9::chr10:67821185..67821217,-#_00d187047bebb153057200de385c7396 | p@chr10:67821185..67821217, - |
| 4.9e-53 | FFCP PHASE1:Mm9::chr2:113589030..113589077,-#_00d187047bebb153057200de385c7396 | p@chr2:113589030..113589077, - |
| 4.9e-53 | FFCP PHASE2:Mm9::chr2:113589030..113589077,-#_00d187047bebb153057200de385c7396 | p@chr2:113589030..113589077, - |
| 4.9e-53 | FFCP PHASE1:Mm9::chr7:91081998..91082010,-#_00d187047bebb153057200de385c7396 | p@chr7:91081998..91082010, - |
| 4.9e-53 | FFCP PHASE1:Mm9::chr10:67821185..67821217,-#_00d187047bebb153057200de385c7396 | p@chr10:67821185..67821217, - |
| 4.9e-53 | FFCP PHASE1:Mm9::chr17:29227828..29227839,-#_00d187047bebb153057200de385c7396 | p@chr17:29227828..29227839, - |
| 4.9e-53 | FFCP PHASE2:Mm9::chr17:29227828..29227839,-#_00d187047bebb153057200de385c7396 | p@chr17:29227828..29227839, - |
| 4.9e-53 | FFCP PHASE1:Mm9::chr14:24251717..24251731,+#_00d187047bebb153057200de385c7396 | p@chr14:24251717..24251731, + |
| 4.9e-53 | FFCP PHASE2:Mm9::chr7:91081998..91082010,-#_00d187047bebb153057200de385c7396 | p@chr7:91081998..91082010, - |
| 4.9e-53 | FFCP PHASE2:Mm9::chr13:113253807..113253846,+#_00d187047bebb153057200de385c7396 | p4@Il6st |
| 4.9e-53 | FFCP PHASE2:Mm9::chr10:67598037..67598049,-#_00d187047bebb153057200de385c7396 | p@chr10:67598037..67598049, - |
| 7.35e-53 | FFCP PHASE1:Mm9::chr4:58219542..58219545,-#_84311a3de4c5c226919f47d5c8b25bb2 | p11@Svep1 |
| 7.35e-53 | FFCP PHASE2:Mm9::chr4:58219542..58219545,-#_84311a3de4c5c226919f47d5c8b25bb2 | p11@Svep1 |
| 1.1e-52 | FFCP PHASE2:Mm9::chrX:160838787..160838800,+#_7491c67ee1f4e469955fbc1001d21d17 | p@chrX:160838787..160838800, + |
| 1.1e-52 | FFCP PHASE1:Mm9::chrX:160838787..160838800,+#_7491c67ee1f4e469955fbc1001d21d17 | p@chrX:160838787..160838800, + |
| 1.65e-52 | FFCP PHASE1:Mm9::chr1:137662814..137662817,+#_96ae99140b35bb31ce5271bd36d9253d | p5@Phlda3 |
| 1.65e-52 | FFCP PHASE2:Mm9::chr1:137662814..137662817,+#_96ae99140b35bb31ce5271bd36d9253d | p5@Phlda3 |
| 5.51e-52 | FFCP PHASE1:Mm9::chr2:65009852..65009866,-#_dbebaa93707af12fa29b2ac93efc2a73 | p@chr2:65009852..65009866, - |
| 5.51e-52 | FFCP PHASE2:Mm9::chr2:65009852..65009866,-#_dbebaa93707af12fa29b2ac93efc2a73 | p@chr2:65009852..65009866, - |
| 1.18e-44 | FFCP PHASE1:Mm9::chr11:86417559..86417568,+#_9baf97d2176d62816e6b12fbae721423 | p@chr11:86417559..86417568, + |
| 1.18e-44 | FFCP PHASE1:Mm9::chr17:14813242..14813246,-#_9baf97d2176d62816e6b12fbae721423 | p@chr17:14813242..14813246, - |
| 1.18e-44 | FFCP PHASE1:Mm9::chr2:178190136..178190151,+#_9baf97d2176d62816e6b12fbae721423 | p@chr2:178190136..178190151, + |
| 1.18e-44 | FFCP PHASE2:Mm9::chr2:178190136..178190151,+#_9baf97d2176d62816e6b12fbae721423 | p@chr2:178190136..178190151, + |
| 1.18e-44 | FFCP PHASE2:Mm9::chr17:14813242..14813246,-#_9baf97d2176d62816e6b12fbae721423 | p@chr17:14813242..14813246, - |
| 1.18e-44 | FFCP PHASE2:Mm9::chr1:127573864..127573879,+#_9baf97d2176d62816e6b12fbae721423 | p10@Gpr39 |
| 1.18e-44 | FFCP PHASE1:Mm9::chrX:160838683..160838694,+#_9baf97d2176d62816e6b12fbae721423 | p@chrX:160838683..160838694, + |
| 1.18e-44 | FFCP PHASE2:Mm9::chr11:86417559..86417568,+#_9baf97d2176d62816e6b12fbae721423 | p@chr11:86417559..86417568, + |
| 1.18e-44 | FFCP PHASE1:Mm9::chr13:119579287..119579292,+#_9baf97d2176d62816e6b12fbae721423 | p@chr13:119579287..119579292, + |
| 1.18e-44 | FFCP PHASE1:Mm9::chr1:127573864..127573879,+#_9baf97d2176d62816e6b12fbae721423 | p10@Gpr39 |
| 1.18e-44 | FFCP PHASE2:Mm9::chr13:119579287..119579292,+#_9baf97d2176d62816e6b12fbae721423 | p@chr13:119579287..119579292, + |
| 1.18e-44 | FFCP PHASE2:Mm9::chrX:160838683..160838694,+#_9baf97d2176d62816e6b12fbae721423 | p@chrX:160838683..160838694, + |
| 1.66e-44 | FFCP PHASE1:Mm9::chrX:160839663..160839673,+#_842a8500495769afb61fb38470382f25 | p@chrX:160839663..160839673, + |
| 1.66e-44 | FFCP PHASE2:Mm9::chrX:160839663..160839673,+#_842a8500495769afb61fb38470382f25 | p@chrX:160839663..160839673, + |
| 1.66e-44 | FFCP PHASE1:Mm9::chr13:119503185..119503195,+#_842a8500495769afb61fb38470382f25 | p9@Fgf10 |
| 1.66e-44 | FFCP PHASE2:Mm9::chr13:119503185..119503195,+#_842a8500495769afb61fb38470382f25 | p9@Fgf10 |
| 2.33e-44 | FFCP PHASE1:Mm9::chr17:75790300..75790304,+#_8db0bbb088e5380556a8ec987764ef62 | p@chr17:75790300..75790304, + |
| 2.33e-44 | FFCP PHASE2:Mm9::chr17:75790300..75790304,+#_8db0bbb088e5380556a8ec987764ef62 | p@chr17:75790300..75790304, + |
| 3.27e-44 | FFCP PHASE2:Mm9::chr1:127573708..127573719,+#_2fd689efeca6c022ff9b7c5b6dfff33d | p9@Gpr39 |
| 3.27e-44 | FFCP PHASE1:Mm9::chr1:127573708..127573719,+#_2fd689efeca6c022ff9b7c5b6dfff33d | p9@Gpr39 |
| 4.58e-44 | FFCP PHASE1:Mm9::chr17:14813991..14813999,+#_05324130f3620ca3cd5c0cb7c089f602 | p@chr17:14813991..14813999, + |
| 4.58e-44 | FFCP PHASE2:Mm9::chr17:14813991..14813999,+#_05324130f3620ca3cd5c0cb7c089f602 | p@chr17:14813991..14813999, + |
