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{{UBERON
{{UBERON
|id=UBERON:0005985
|alt_id=
|name=coronary vessel
|namespace=
|def="any of the arteries or veins that supply blood to the heart or return blood from the heart muscles to the circulation" [MP:0010551]
|xref=MESH:A.07.231.114.269
|is_a=UBERON:0000055;;UBERON:0004120
|synonym=
|comment=TODO - change relation from part_of
|comment=TODO - change relation from part_of
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="any of the arteries or veins that supply blood to the heart or return blood from the heart muscles to the circulation" [MP:0010551]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005985
|is_a=UBERON:0000055 ;;UBERON:0004120
|is_obsolete=
|located_in=
|located_in=
|name=coronary vessel
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0000948
|part_of=UBERON:0000948
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=
|synonym=
|union_of=
|xref=MESH:A.07.231.114.269
}}
}}

Latest revision as of 17:56, 12 September 2014

Name:coronary vessel
Namespace:FANTOM
Definition:"any of the arteries or veins that supply blood to the heart or return blood from the heart muscles to the circulation" [MP:0010551]
Xrefs:
links:
MESH:A.07.231.114.269
Comments:TODO - change relation from part_of

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000055(vessel),UBERON:0004120(mesoderm-derived structure)
part_of:UBERON:0000948(heart)



Children

is a:UBERON:0003498 (heart blood vessel)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

  • 11286-116I8 (Smooth Muscle Cells - Coronary Artery, donor1)
  • 11363-117I4 (Smooth Muscle Cells - Coronary Artery, donor2)
  • 11435-118H4 (Smooth Muscle Cells - Coronary Artery, donor3)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005985 (coronary vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.48e-40FFCP PHASE2:Hg19::chr2:228743006..228743014,+#_5b612e65d11890b22cafc5466fd26c66p@chr2:228743006..228743014, +
1.48e-40FFCP PHASE1:Hg19::chr6:21648948..21648949,+#_5b612e65d11890b22cafc5466fd26c66p@chr6:21648948..21648949, +
1.48e-40FFCP PHASE1:Hg19::chr4:70707713..70707716,-#_5b612e65d11890b22cafc5466fd26c66p@chr4:70707713..70707716, -
1.48e-40FFCP PHASE2:Hg19::chr8:90366581..90366594,-#_5b612e65d11890b22cafc5466fd26c66p@chr8:90366581..90366594, -
1.48e-40FFCP PHASE2:Hg19::chr6:21648948..21648949,+#_5b612e65d11890b22cafc5466fd26c66p@chr6:21648948..21648949, +
1.48e-40FFCP PHASE1:Hg19::chr8:90366581..90366594,-#_5b612e65d11890b22cafc5466fd26c66p@chr8:90366581..90366594, -
1.48e-40FFCP PHASE2:Hg19::chr8:96701429..96701463,-#_5b612e65d11890b22cafc5466fd26c66p@chr8:96701429..96701463, -
1.48e-40FFCP PHASE1:Hg19::chr8:96701429..96701463,-#_5b612e65d11890b22cafc5466fd26c66p@chr8:96701429..96701463, -
1.48e-40FFCP PHASE2:Hg19::chr4:70707713..70707716,-#_5b612e65d11890b22cafc5466fd26c66p@chr4:70707713..70707716, -
1.48e-40FFCP PHASE1:Hg19::chr2:228743006..228743014,+#_5b612e65d11890b22cafc5466fd26c66p@chr2:228743006..228743014, +
3.31e-40FFCP PHASE2:Hg19::chr6:148593641..148593643,+#_4f3a3c3c85f6015ab40a00323e128d72p@chr6:148593641..148593643, +
3.31e-40FFCP PHASE1:Hg19::chr6:148593641..148593643,+#_4f3a3c3c85f6015ab40a00323e128d72p@chr6:148593641..148593643, +
6.16e-36FFCP PHASE2:Hg19::chr1:94752932..94752936,+#_6a53dc6d9ed2f3bf8a22842d080f5e62p@chr1:94752932..94752936, +
6.16e-36FFCP PHASE1:Hg19::chr1:94752932..94752936,+#_6a53dc6d9ed2f3bf8a22842d080f5e62p@chr1:94752932..94752936, +
5.47e-34FFCP PHASE2:Hg19::chr14:45251956..45251976,-#_0aefc022b6f9a84111be99a516b072e3p1@ENST00000556405
5.47e-34FFCP PHASE1:Hg19::chr14:45251956..45251976,-#_0aefc022b6f9a84111be99a516b072e3p1@ENST00000556405
7.44e-33FFCP PHASE2:Hg19::chr9:3898804..3898817,-#_de5fb900f00be980dc0788e96de3b0e7p@chr9:3898804..3898817, -
7.44e-33FFCP PHASE1:Hg19::chr9:3898804..3898817,-#_de5fb900f00be980dc0788e96de3b0e7p@chr9:3898804..3898817, -
1.91e-30FFCP PHASE2:Hg19::chr4:74703561..74703579,+#_233af4f8911a757da7bcc08d9defff62p@chr4:74703561..74703579, +
1.91e-30FFCP PHASE1:Hg19::chr4:74703561..74703579,+#_233af4f8911a757da7bcc08d9defff62p@chr4:74703561..74703579, +
2.72e-27FFCP PHASE2:Hg19::chr7:44119200..44119249,-#_b2430bf081363c9229923a41f659d393p@chr7:44119200..44119249, -
2.72e-27FFCP PHASE1:Hg19::chr7:44119200..44119249,-#_b2430bf081363c9229923a41f659d393p@chr7:44119200..44119249, -
3.55e-27FFCP PHASE2:Hg19::chr4:169022528..169022531,+#_a806967c1a34315d4f054af238444d2fp@chr4:169022528..169022531, +
3.55e-27FFCP PHASE1:Hg19::chr4:169022528..169022531,+#_a806967c1a34315d4f054af238444d2fp@chr4:169022528..169022531, +
3.26e-26FFCP PHASE2:Hg19::chr11:102668185..102668198,-#_db6ba687ae8409da6558177f40cc2ee7p12@MMP1
3.26e-26FFCP PHASE1:Hg19::chr11:102668185..102668198,-#_db6ba687ae8409da6558177f40cc2ee7p12@MMP1
7.34e-25FFCP PHASE2:Hg19::chr3:112081052..112081065,-#_6935bb70c6a463de6b2ecf73d59f7ec2p@chr3:112081052..112081065, -
7.34e-25FFCP PHASE1:Hg19::chr3:112081052..112081065,-#_6935bb70c6a463de6b2ecf73d59f7ec2p@chr3:112081052..112081065, -
2.47e-24FFCP PHASE2:Hg19::chr7:81146338..81146341,-#_47c7b0856a741cb76a0226c3c98dff55p@chr7:81146338..81146341, -
2.47e-24FFCP PHASE1:Hg19::chr7:81146338..81146341,-#_47c7b0856a741cb76a0226c3c98dff55p@chr7:81146338..81146341, -
1.61e-23FFCP PHASE2:Hg19::chr12:66026167..66026180,+#_3a2e3c5111c4239333aa34ebc709ee3ep@chr12:66026167..66026180, +
1.61e-23FFCP PHASE1:Hg19::chr12:66026167..66026180,+#_3a2e3c5111c4239333aa34ebc709ee3ep@chr12:66026167..66026180, +
1.7e-23FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_a94bc17ba10a0fc0352fbad4c8082047p@chr6:53359400..53359406, +
1.7e-23FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_a94bc17ba10a0fc0352fbad4c8082047p@chr6:53359400..53359406, +
2.99e-23FFCP PHASE2:Hg19::chr20:30347712..30347751,+#_ffaff0c35fd22c52b73e5ace8a621f87p5@TPX2
2.99e-23FFCP PHASE1:Hg19::chr20:30347712..30347751,+#_ffaff0c35fd22c52b73e5ace8a621f87p5@TPX2
1.77e-22FFCP PHASE2:Hg19::chr9:118916228..118916241,+#_c380b2ef186bcdafc5604823e0c56ef5p18@PAPPA
1.77e-22FFCP PHASE1:Hg19::chr9:118916228..118916241,+#_c380b2ef186bcdafc5604823e0c56ef5p18@PAPPA
5.51e-22FFCP PHASE2:Hg19::chr11:102661460..102661475,-#_662f662bb7d0ce7418f4f36b6ec830dap@chr11:102661460..102661475, -
5.51e-22FFCP PHASE1:Hg19::chr11:102661460..102661475,-#_662f662bb7d0ce7418f4f36b6ec830dap@chr11:102661460..102661475, -
2.95e-21FFCP PHASE2:Hg19::chr11:12182490..12182503,+#_2b95e65d9082f44435751689b13dc14ep8@MICAL2
2.95e-21FFCP PHASE1:Hg19::chr11:12182490..12182503,+#_2b95e65d9082f44435751689b13dc14ep8@MICAL2
4.21e-21FFCP PHASE2:Hg19::chr21:35014977..35014986,+#_2d8b7ffad128ee736cfd27fcbb721651p16@ITSN1
4.21e-21FFCP PHASE1:Hg19::chr21:35014977..35014986,+#_2d8b7ffad128ee736cfd27fcbb721651p16@ITSN1
4.21e-21FFCP PHASE2:Hg19::chr9:119160366..119160371,+#_2d8b7ffad128ee736cfd27fcbb721651p91@PAPPA
4.21e-21FFCP PHASE1:Hg19::chr9:119160366..119160371,+#_2d8b7ffad128ee736cfd27fcbb721651p91@PAPPA
4.21e-21FFCP PHASE2:Hg19::chr4:70707556..70707558,-#_2d8b7ffad128ee736cfd27fcbb721651p@chr4:70707556..70707558, -
4.21e-21FFCP PHASE1:Hg19::chr4:70707556..70707558,-#_2d8b7ffad128ee736cfd27fcbb721651p@chr4:70707556..70707558, -
5.15e-21FFCP PHASE2:Hg19::chr9:118413157..118413164,-#_703506afd0b61fb4973db5e4f7f0ed83p@chr9:118413157..118413164, -
5.15e-21FFCP PHASE1:Hg19::chr8:120651826..120651840,-#_703506afd0b61fb4973db5e4f7f0ed83p@chr8:120651826..120651840, -
5.15e-21FFCP PHASE2:Hg19::chr3:158928407..158928414,+#_703506afd0b61fb4973db5e4f7f0ed83p@chr3:158928407..158928414, +
5.15e-21FFCP PHASE1:Hg19::chr9:118413157..118413164,-#_703506afd0b61fb4973db5e4f7f0ed83p@chr9:118413157..118413164, -
5.15e-21FFCP PHASE2:Hg19::chr3:114343262..114343275,+#_703506afd0b61fb4973db5e4f7f0ed83p@chr3:114343262..114343275, +
5.15e-21FFCP PHASE1:Hg19::chr3:158928407..158928414,+#_703506afd0b61fb4973db5e4f7f0ed83p@chr3:158928407..158928414, +
5.15e-21FFCP PHASE2:Hg19::chr6:38754506..38754523,+#_703506afd0b61fb4973db5e4f7f0ed83p@chr6:38754506..38754523, +
5.15e-21FFCP PHASE2:Hg19::chr2:220325633..220325639,+#_703506afd0b61fb4973db5e4f7f0ed83p34@SPEG
5.15e-21FFCP PHASE2:Hg19::chr11:86649555..86649566,-#_703506afd0b61fb4973db5e4f7f0ed83p@chr11:86649555..86649566, -
5.15e-21FFCP PHASE1:Hg19::chr3:114343262..114343275,+#_703506afd0b61fb4973db5e4f7f0ed83p@chr3:114343262..114343275, +
5.15e-21FFCP PHASE1:Hg19::chr6:38754506..38754523,+#_703506afd0b61fb4973db5e4f7f0ed83p@chr6:38754506..38754523, +
5.15e-21FFCP PHASE1:Hg19::chr11:86649555..86649566,-#_703506afd0b61fb4973db5e4f7f0ed83p@chr11:86649555..86649566, -
5.15e-21FFCP PHASE2:Hg19::chr6:21666284..21666297,+#_703506afd0b61fb4973db5e4f7f0ed83p26@LINC00340
5.15e-21FFCP PHASE1:Hg19::chr2:220325633..220325639,+#_703506afd0b61fb4973db5e4f7f0ed83p34@SPEG
5.15e-21FFCP PHASE1:Hg19::chr6:21666284..21666297,+#_703506afd0b61fb4973db5e4f7f0ed83p26@LINC00340
5.15e-21FFCP PHASE2:Hg19::chr10:90749902..90749913,+#_703506afd0b61fb4973db5e4f7f0ed83p14@FAS
5.15e-21FFCP PHASE2:Hg19::chr1:78475671..78475674,+#_703506afd0b61fb4973db5e4f7f0ed83p@chr1:78475671..78475674, +
5.15e-21FFCP PHASE2:Hg19::chr8:107871438..107871439,-#_703506afd0b61fb4973db5e4f7f0ed83p@chr8:107871438..107871439, -
5.15e-21FFCP PHASE1:Hg19::chr10:90749902..90749913,+#_703506afd0b61fb4973db5e4f7f0ed83p14@FAS
5.15e-21FFCP PHASE1:Hg19::chr1:78475671..78475674,+#_703506afd0b61fb4973db5e4f7f0ed83p@chr1:78475671..78475674, +
5.15e-21FFCP PHASE2:Hg19::chr2:216638374..216638390,-#_703506afd0b61fb4973db5e4f7f0ed83p@chr2:216638374..216638390, -
5.15e-21FFCP PHASE1:Hg19::chr8:107871438..107871439,-#_703506afd0b61fb4973db5e4f7f0ed83p@chr8:107871438..107871439, -
5.15e-21FFCP PHASE1:Hg19::chr6:16905879..16905882,+#_703506afd0b61fb4973db5e4f7f0ed83p@chr6:16905879..16905882, +
5.15e-21FFCP PHASE2:Hg19::chr1:168165589..168165617,+#_703506afd0b61fb4973db5e4f7f0ed83p@chr1:168165589..168165617, +
5.15e-21FFCP PHASE2:Hg19::chr4:69048358..69048369,-#_703506afd0b61fb4973db5e4f7f0ed83p@chr4:69048358..69048369, -
5.15e-21FFCP PHASE2:Hg19::chr6:16905879..16905882,+#_703506afd0b61fb4973db5e4f7f0ed83p@chr6:16905879..16905882, +
5.15e-21FFCP PHASE1:Hg19::chr2:216638374..216638390,-#_703506afd0b61fb4973db5e4f7f0ed83p@chr2:216638374..216638390, -
5.15e-21FFCP PHASE2:Hg19::chrX:23072856..23072859,-#_703506afd0b61fb4973db5e4f7f0ed83p@chrX:23072856..23072859, -
5.15e-21FFCP PHASE2:Hg19::chr4:104020020..104020035,-#_703506afd0b61fb4973db5e4f7f0ed83p@chr4:104020020..104020035, -
5.15e-21FFCP PHASE1:Hg19::chr1:168165589..168165617,+#_703506afd0b61fb4973db5e4f7f0ed83p@chr1:168165589..168165617, +
5.15e-21FFCP PHASE1:Hg19::chr4:69048358..69048369,-#_703506afd0b61fb4973db5e4f7f0ed83p@chr4:69048358..69048369, -
5.15e-21FFCP PHASE1:Hg19::chrX:23072856..23072859,-#_703506afd0b61fb4973db5e4f7f0ed83p@chrX:23072856..23072859, -
5.15e-21FFCP PHASE1:Hg19::chr4:104020020..104020035,-#_703506afd0b61fb4973db5e4f7f0ed83p@chr4:104020020..104020035, -
5.15e-21FFCP PHASE2:Hg19::chr20:25521435..25521445,-#_703506afd0b61fb4973db5e4f7f0ed83p8@NINL
5.15e-21FFCP PHASE1:Hg19::chr20:25521435..25521445,-#_703506afd0b61fb4973db5e4f7f0ed83p8@NINL
5.15e-21FFCP PHASE2:Hg19::chr8:120651826..120651840,-#_703506afd0b61fb4973db5e4f7f0ed83p@chr8:120651826..120651840, -
1.1e-20FFCP PHASE2:Hg19::chr11:102665915..102665927,+#_5f828fe46aab3a9894d562ac7d2de9f7p@chr11:102665915..102665927, +
1.1e-20FFCP PHASE1:Hg19::chr11:102665915..102665927,+#_5f828fe46aab3a9894d562ac7d2de9f7p@chr11:102665915..102665927, +
1.34e-20FFCP PHASE1:Hg19::chr11:116728814..116728821,-#_cb36f324ad894cc3e1b7cced9a5b16bbp@chr11:116728814..116728821, -
1.34e-20FFCP PHASE2:Hg19::chr11:116728814..116728821,-#_cb36f324ad894cc3e1b7cced9a5b16bbp@chr11:116728814..116728821, -
6.22e-20FFCP PHASE2:Hg19::chr9:118916382..118916386,+#_85c4fa50382384e4f59b2ab762547fc6p19@PAPPA
6.22e-20FFCP PHASE1:Hg19::chr9:118916382..118916386,+#_85c4fa50382384e4f59b2ab762547fc6p19@PAPPA
1.77e-19FFCP PHASE2:Hg19::chr5:150019081..150019093,+#_e9c540e00ecb43db5864c816faf241b3p@chr5:150019081..150019093, +
1.77e-19FFCP PHASE1:Hg19::chr5:150019081..150019093,+#_e9c540e00ecb43db5864c816faf241b3p@chr5:150019081..150019093, +
3.38e-19FFCP PHASE2:Hg19::chr3:149086808..149086812,+#_464f284d7477bedd254de8a1d78f25bcp@chr3:149086808..149086812, +
3.38e-19FFCP PHASE1:Hg19::chr3:149086808..149086812,+#_464f284d7477bedd254de8a1d78f25bcp@chr3:149086808..149086812, +
5.94e-19FFCP PHASE2:Hg19::chr4:7846444..7846449,-#_46c62b9f19c166513b7fb3a20da73010p@chr4:7846444..7846449, -
5.94e-19FFCP PHASE1:Hg19::chr4:7846444..7846449,-#_46c62b9f19c166513b7fb3a20da73010p@chr4:7846444..7846449, -
1.48e-18FFCP PHASE1:Hg19::chr8:42033253..42033264,-#_3c02293e4be885b25ed4aa8739aae209p@chr8:42033253..42033264, -
1.48e-18FFCP PHASE2:Hg19::chr8:42033253..42033264,-#_3c02293e4be885b25ed4aa8739aae209p@chr8:42033253..42033264, -
1.62e-18FFCP PHASE2:Hg19::chr7:5569572..5569582,-#_9ce19c745462fafecf46fa5894a73fd4p40@ACTB
1.62e-18FFCP PHASE1:Hg19::chr7:5569572..5569582,-#_9ce19c745462fafecf46fa5894a73fd4p40@ACTB

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