FFCP PHASE1:Hg19::chr10:80008582..80008616,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:80008582..80008616,+ to FFCP PHASE1:Hg19::chr10:80008582..80008616,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_ENST00000423770,ENST00000432742_5end | |||
|cluster_id=chr10:80008582..80008616,+ | |||
|description=CAGE_peak_1_at_ENST00000423770_5end,CAGE_peak_1_at_ENST00000432742_5end | |||
|id=chr10:80008582..80008616,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.43e-25!180;CL:0000057!3.01e-22!75;CL:0002620!3.73e-13!23;CL:0000048!3.62e-12!430;CL:0000723!1.82e-11!436;CL:0000034!6.19e-11!444;CL:0002334!1.10e-10!12;CL:0002320!1.48e-07!365;CL:0000680!2.15e-07!57;CL:0000056!2.15e-07!57;CL:0000355!2.15e-07!57;CL:0000134!4.52e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0002334;3.52e-19;12!CL:0002620;1.57e-18;23!CL:0002559;3.13e-12;5!CL:0000057;4.85e-10;73!CL:0002580;2.89e-09;3!CL:0002579;1.12e-08;3!CL:0000135;1.48e-08;3!CL:0000388;1.48e-08;3!CL:0000346;6.80e-08;3!CL:1000428;6.80e-08;3!CL:0002320;3.55e-07;188!CL:0000499;4.20e-07;28!CL:0000153;7.56e-07;9!CL:0000447;7.56e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.85e-31,76;CL:0002334,2.61e-19,12;CL:0002620,1.85e-18,23;CL:0000048,1.73e-13,427;CL:0000723,4.59e-13,433;CL:0000034,1.62e-12,441;CL:0002559,3.34e-12,5;CL:0000134,5.60e-12,354;CL:0002320,1.86e-11,361;CL:0000219,1.24e-09,386;CL:0002580,3.01e-09,3;CL:0002579,1.17e-08,3;CL:0000135,1.58e-08,3;CL:0000388,1.58e-08,3;CL:0000346,7.50e-08,3;CL:1000428,7.50e-08,3;CL:0000136,1.55e-07,15;CL:0000499,4.67e-07,28;CL:0000153,8.61e-07,9;CL:0000447,8.61e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.29e-12;5!DOID:450;3.29e-12;5!DOID:66;3.29e-12;5!DOID:423;3.29e-12;5!DOID:0080000;3.29e-12;5!DOID:11722;3.29e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.50e-12,5;DOID:450,3.50e-12,5;DOID:66,3.50e-12,5;DOID:423,3.50e-12,5;DOID:0080000,3.50e-12,5;DOID:11722,3.50e-12,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!3.02e-13!365;UBERON:0002199!1.58e-11!45;UBERON:0002416!1.58e-11!45;UBERON:0000914!3.21e-10!83;UBERON:0002329!3.21e-10!83;UBERON:0003077!3.21e-10!83;UBERON:0003059!3.21e-10!83;UBERON:0007282!3.21e-10!83;UBERON:0009618!3.21e-10!83;UBERON:0007285!3.21e-10!83;UBERON:0001049!5.62e-10!57;UBERON:0005068!5.62e-10!57;UBERON:0006241!5.62e-10!57;UBERON:0007135!5.62e-10!57;UBERON:0002097!1.03e-09!40;UBERON:0002020!3.58e-09!34;UBERON:0003528!3.58e-09!34;UBERON:0001869!5.17e-09!32;UBERON:0001893!5.50e-09!34;UBERON:0003102!6.18e-09!95;UBERON:0002791!1.50e-08!33;UBERON:0002616!1.85e-08!59;UBERON:0004290!4.69e-08!70;UBERON:0002384!5.39e-08!375;UBERON:0000955!5.52e-08!69;UBERON:0006238!5.52e-08!69;UBERON:0001017!7.40e-08!82;UBERON:0002780!7.47e-08!41;UBERON:0001890!7.47e-08!41;UBERON:0006240!7.47e-08!41;UBERON:0000956!9.06e-08!25;UBERON:0000203!9.06e-08!25;UBERON:0003080!1.66e-07!42;UBERON:0005743!1.92e-07!86;UBERON:0002619!2.31e-07!22;UBERON:0003688!3.12e-07!6;UBERON:0002358!3.12e-07!6;UBERON:0003684!3.12e-07!6;UBERON:0001178!3.12e-07!6;UBERON:0000486!7.35e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.49e-15;41!UBERON:0004457;5.89e-14;9!UBERON:0000042;5.89e-14;9!UBERON:0002073;3.13e-12;5!UBERON:0002199;5.48e-12;46!UBERON:0002416;5.48e-12;46!UBERON:0003102;5.58e-11;50!UBERON:0003688;5.97e-11;6!UBERON:0002358;5.97e-11;6!UBERON:0003684;5.97e-11;6!UBERON:0001178;5.97e-11;6!UBERON:0007846;1.48e-08;3!UBERON:0000043;1.48e-08;3!UBERON:0007845;1.48e-08;3!UBERON:0000412;6.80e-08;3!UBERON:0001992;6.80e-08;3!UBERON:0002384;1.32e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.73e-19,41;UBERON:0002199,2.07e-18,46;UBERON:0002416,2.07e-18,46;UBERON:0003102,1.47e-14,99;UBERON:0002073,3.34e-12,5;UBERON:0005086,3.34e-12,5;UBERON:0002384,5.26e-12,371;UBERON:0003688,6.50e-11,6;UBERON:0002358,6.50e-11,6;UBERON:0003684,6.50e-11,6;UBERON:0001178,6.50e-11,6;UBERON:0004457,3.97e-10,12;UBERON:0000042,3.97e-10,12;UBERON:0007846,1.58e-08,3;UBERON:0000043,1.58e-08,3;UBERON:0007845,1.58e-08,3;UBERON:0000412,7.50e-08,3;UBERON:0001992,7.50e-08,3 | |||
|phase1_expression=9.99231085988061,6.63711624062048,8.45726424575827,4.00293193412522,0.446961094427288,1.74467704820074,0,0.631719873426831,0.522371256399677,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0.975865597581014,0.246242116153576,0.408001382488506,0,0,0.821246550437305,0.125542639594803,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0.398927315243264,0.426224750532694,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61439152384566,1.00267582127178,2.31754430337318,0.795285947051099,0.973269740605272,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.633152558322899,3.31022952033047,1.14734648299525,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.298897361103602,0,0.323745888736263,0.140450806702248,0.408308342509787,0,0.826606249406124,9.50402285825643,11.3742787468136,0,0,0,0.125118519871964,0.554128230968366,5.26773145057006,8.58165828237255,4.35690370829131,0,11.660326319776,1.70845911054854,1.05965950579781,9.00273288253207,2.37020817248409,2.06112432036503,2.23340227597908,14.6835409049902,10.815507572893,10.8546522924969,3.40584624976508,0.646584227275248,14.9104028856978,13.7022853589591,3.05209066158878,0,0,0,0,0,0,0,0,0,6.25798129319264,3.21620469096443,1.38134921352481,2.3218396401599,7.94067429836544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,0,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0.239624855491583,0,2.85273810081437,4.92256442669769,0.410952645100767,3.76028022803781,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0.892144943985809,0,0,0.300946099727719,0,1.03473071292505,0.664225598535437,0.184369168541703,0.434418072340414,0,0,0,0,0,0,0,0,11.164851351845,17.187741008263,12.9103643439214,15.6329762091955,7.16390148693385,3.37793234401576,1.48418066444991,0.771048469013278,1.77561725313127,1.97105174433142,0,1.51073491997947,0,0,0,5.51109351190112,0.182091168006717,3.14698595902618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.386682873168488,0.154048617114644,0.15350367472613,0,0.214840489736547,0,0.0852266274161009,0,0,0,0,0,0.929691098594572,1.88887408098384,0,0,0,2.60979897622522,0.37064843820784,0,0,0,0,0.255897791311334,0.855877976067841,0.318203247925937,0,0.179872457583315,0.823611089208164,0.117812402345686,0.202182481573316,0,0,0,1.70599442741899,0,0.409499734223957,3.11091950298168,0,1.10273068709225,1.32687795048244,0.876901770507525,0.578775534266688,0,0,1.239293992399,0,0.143411352204052,0.0982490410131212,0,0.709522128141196,13.2997810237528,15.8061548620753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0.228234679033192,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0.276283915531148,0,0,0,4.0435146396035,0,0,0,0,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.241192877250816,0,0.110579259931225,0,0.438770794307945,0,0,0,0.569710279235006,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.337005664903385,0,0.468528891450678,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0.443175571691151,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0,0,0,0.789744236554321,0,0,0,0,0,0,0,0,0,5.97299561929084,0.864221491201268,3.91904832131291,0,0,1.36310417428337,0,0,0,0.517131825446202,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0.1251909307065,0,0.221858103073705,0.683060432355218,0,0,0,0,0,0,0,1.49254802886874,2.10341978862502,0,8.90194124792919,5.0313580350515,21.3554693183169,11.4420034198462,2.7221566277383,1.86524640699337,0.443565449968902,0.159296767163702,0.449803112163605,0,0,0.265841714557995,0,0.300515217994437,0,0,0.363697318405119,0.107410557042488,0.464033759878494,0.398095888698616,0.400027764663154,8.24149692438703,7.40848875285022,0,0,0,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5124185923576,0.642292250964595,0,0.638535436228605,0.205116364240755,0.504143392443436,0.622415272177961,1.77623210195036,0,0,0,0,0,4.19520305013884,0,0,0,0.40341013740704,0,0,0,0,0.337687923091973,0,0.206686796501184,0.697573912132975,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.611727596791485,0.657727735628491,0,0,0.156986185701028,0.471346769748006,0,1.82631744101899,0,0,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| |phase1_expression=9.99231085988061,6.63711624062048,8.45726424575827,4.00293193412522,0.446961094427288,1.74467704820074,0,0.631719873426831,0.522371256399677,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0.975865597581014,0.246242116153576,0.408001382488506,0,0,0.821246550437305,0.125542639594803,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0.398927315243264,0.426224750532694,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61439152384566,1.00267582127178,2.31754430337318,0.795285947051099,0.973269740605272,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.633152558322899,3.31022952033047,1.14734648299525,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.298897361103602,0,0.323745888736263,0.140450806702248,0.408308342509787,0,0.826606249406124,9.50402285825643,11.3742787468136,0,0,0,0.125118519871964,0.554128230968366,5.26773145057006,8.58165828237255,4.35690370829131,0,11.660326319776,1.70845911054854,1.05965950579781,9.00273288253207,2.37020817248409,2.06112432036503,2.23340227597908,14.6835409049902,10.815507572893,10.8546522924969,3.40584624976508,0.646584227275248,14.9104028856978,13.7022853589591,3.05209066158878,0,0,0,0,0,0,0,0,0,6.25798129319264,3.21620469096443,1.38134921352481,2.3218396401599,7.94067429836544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,0,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0.239624855491583,0,2.85273810081437,4.92256442669769,0.410952645100767,3.76028022803781,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0.892144943985809,0,0,0.300946099727719,0,1.03473071292505,0.664225598535437,0.184369168541703,0.434418072340414,0,0,0,0,0,0,0,0,11.164851351845,17.187741008263,12.9103643439214,15.6329762091955,7.16390148693385,3.37793234401576,1.48418066444991,0.771048469013278,1.77561725313127,1.97105174433142,0,1.51073491997947,0,0,0,5.51109351190112,0.182091168006717,3.14698595902618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.386682873168488,0.154048617114644,0.15350367472613,0,0.214840489736547,0,0.0852266274161009,0,0,0,0,0,0.929691098594572,1.88887408098384,0,0,0,2.60979897622522,0.37064843820784,0,0,0,0,0.255897791311334,0.855877976067841,0.318203247925937,0,0.179872457583315,0.823611089208164,0.117812402345686,0.202182481573316,0,0,0,1.70599442741899,0,0.409499734223957,3.11091950298168,0,1.10273068709225,1.32687795048244,0.876901770507525,0.578775534266688,0,0,1.239293992399,0,0.143411352204052,0.0982490410131212,0,0.709522128141196,13.2997810237528,15.8061548620753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0.228234679033192,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0.276283915531148,0,0,0,4.0435146396035,0,0,0,0,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.241192877250816,0,0.110579259931225,0,0.438770794307945,0,0,0,0.569710279235006,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.337005664903385,0,0.468528891450678,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0.443175571691151,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0,0,0,0.789744236554321,0,0,0,0,0,0,0,0,0,5.97299561929084,0.864221491201268,3.91904832131291,0,0,1.36310417428337,0,0,0,0.517131825446202,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0.1251909307065,0,0.221858103073705,0.683060432355218,0,0,0,0,0,0,0,1.49254802886874,2.10341978862502,0,8.90194124792919,5.0313580350515,21.3554693183169,11.4420034198462,2.7221566277383,1.86524640699337,0.443565449968902,0.159296767163702,0.449803112163605,0,0,0.265841714557995,0,0.300515217994437,0,0,0.363697318405119,0.107410557042488,0.464033759878494,0.398095888698616,0.400027764663154,8.24149692438703,7.40848875285022,0,0,0,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5124185923576,0.642292250964595,0,0.638535436228605,0.205116364240755,0.504143392443436,0.622415272177961,1.77623210195036,0,0,0,0,0,4.19520305013884,0,0,0,0.40341013740704,0,0,0,0,0.337687923091973,0,0.206686796501184,0.697573912132975,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.611727596791485,0.657727735628491,0,0,0.156986185701028,0.471346769748006,0,1.82631744101899,0,0,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| ||
|short_description=p1@ENST00000423770,p1@ENST00000432742 | |||
}} | }} |
Latest revision as of 15:50, 23 July 2015
Short description: | p1@ENST00000423770, p1@ENST00000432742 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000423770_5end, CAGE_peak_1_at_ENST00000432742_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENST00000423770, ENST00000432742_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.85e-31 | 76 |
preadipocyte | 2.61e-19 | 12 |
skin fibroblast | 1.85e-18 | 23 |
multi fate stem cell | 1.73e-13 | 427 |
somatic stem cell | 4.59e-13 | 433 |
stem cell | 1.62e-12 | 441 |
hair follicle cell | 3.34e-12 | 5 |
mesenchymal cell | 5.60e-12 | 354 |
connective tissue cell | 1.86e-11 | 361 |
motile cell | 1.24e-09 | 386 |
preadipocyte of the breast | 3.01e-09 | 3 |
omentum preadipocyte | 1.17e-08 | 3 |
fibrocyte | 1.58e-08 | 3 |
tendon cell | 1.58e-08 | 3 |
hair follicle dermal papilla cell | 7.50e-08 | 3 |
stem cell of epidermis | 7.50e-08 | 3 |
fat cell | 1.55e-07 | 15 |
stromal cell | 4.67e-07 | 28 |
GAG secreting cell | 8.61e-07 | 9 |
carbohydrate secreting cell | 8.61e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.73e-19 | 41 |
integument | 2.07e-18 | 46 |
integumental system | 2.07e-18 | 46 |
surface structure | 1.47e-14 | 99 |
hair follicle | 3.34e-12 | 5 |
hair follicle placode | 3.34e-12 | 5 |
connective tissue | 5.26e-12 | 371 |
omentum | 6.50e-11 | 6 |
peritoneum | 6.50e-11 | 6 |
abdominal cavity | 6.50e-11 | 6 |
visceral peritoneum | 6.50e-11 | 6 |
cavity lining | 3.97e-10 | 12 |
serous membrane | 3.97e-10 | 12 |
dense regular connective tissue | 1.58e-08 | 3 |
tendon | 1.58e-08 | 3 |
regular connective tissue | 1.58e-08 | 3 |
dermal papilla | 7.50e-08 | 3 |
papillary layer of dermis | 7.50e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.50e-12 | 5 |
myotonic disease | 3.50e-12 | 5 |
muscle tissue disease | 3.50e-12 | 5 |
myopathy | 3.50e-12 | 5 |
muscular disease | 3.50e-12 | 5 |
myotonic dystrophy | 3.50e-12 | 5 |