FFCP PHASE1:Hg19::chr11:64428818..64428829,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9379 | |EntrezGene=9379 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8009 | |HGNC=8009 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_ENST00000496291_5end | |||
|cluster_id=chr11:64428818..64428829,- | |||
|description=CAGE_peak_12_at_NRXN2_5end | |||
|id=chr11:64428818..64428829,- | |||
|ontology_enrichment_celltype=CL:0000057!5.49e-21!75;CL:0000055!1.54e-19!180;CL:0002620!3.18e-17!23;CL:0000188!1.19e-10!9;CL:0002551!1.57e-08!6;CL:0002556!5.38e-08!6;CL:0000680!2.69e-07!57;CL:0000056!2.69e-07!57;CL:0000355!2.69e-07!57;CL:0000515!7.43e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.69e-16;23!CL:0000056;4.69e-12;4!CL:0000680;1.09e-11;7!CL:0000569;1.77e-11;4!CL:0000515;6.65e-08;3!CL:0000134;7.81e-08;55!CL:0002551;8.33e-08;6!CL:0000346;1.14e-07;3!CL:1000428;1.14e-07;3!CL:0000723;2.11e-07;61!CL:0000048;4.66e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,8.84e-16,23;CL:0000515,4.72e-12,4;CL:0000569,3.17e-11,4;CL:0000011,3.17e-11,4;CL:0000057,1.34e-09,76;CL:0000346,7.90e-08,3;CL:1000428,7.90e-08,3;CL:0002551,1.03e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000515;4.69e-12;4!CL:0000011;1.77e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.43e-16!83;UBERON:0002329!5.43e-16!83;UBERON:0003077!5.43e-16!83;UBERON:0003059!5.43e-16!83;UBERON:0007282!5.43e-16!83;UBERON:0009618!5.43e-16!83;UBERON:0007285!5.43e-16!83;UBERON:0002199!1.69e-15!45;UBERON:0002416!1.69e-15!45;UBERON:0002097!7.20e-14!40;UBERON:0004290!3.42e-13!70;UBERON:0003102!8.46e-12!95;UBERON:0000486!1.25e-10!82;UBERON:0002067!8.41e-10!9;UBERON:0004016!8.41e-10!9;UBERON:0010083!8.41e-10!9;UBERON:0005256!1.84e-08!143;UBERON:0001758!5.38e-08!6;UBERON:0003672!5.38e-08!6;UBERON:0001134!6.99e-08!61;UBERON:0002036!6.99e-08!61;UBERON:0003082!6.99e-08!61;UBERON:0002385!2.06e-07!63;UBERON:0001015!2.06e-07!63;UBERON:0000383!2.06e-07!63;UBERON:0000475!6.12e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;1.67e-13;9!UBERON:0002199;1.32e-11;46!UBERON:0002416;1.32e-11;46!UBERON:0002097;1.56e-11;41!UBERON:0003102;3.51e-09;50!UBERON:0000412;1.14e-07;3!UBERON:0001992;1.14e-07;3!UBERON:0001134;1.39e-07;16!UBERON:0002036;1.39e-07;16!UBERON:0002371;4.87e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,2.17e-15,46;UBERON:0002416,2.17e-15,46;UBERON:0002097,5.84e-15,41;UBERON:0002067,1.59e-13,9;UBERON:0004016,1.59e-13,9;UBERON:0010083,1.59e-13,9;UBERON:0000412,7.90e-08,3;UBERON:0001992,7.90e-08,3;UBERON:0002384,1.38e-07,371;UBERON:0003102,8.76e-07,99 | |||
|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.289693037921647,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.506522046658319,1.32409180813219,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0,0,0,1.5608003841516,1.1409436430889,0.597794722207204,0.822041490506354,1.29498355494505,0.421352420106746,0.204154171254893,0,0.309977343527296,0,0.741800787835671,1.82032272387605,0,0.841680569770331,0.625592599359821,0.277064115484183,1.31693286264251,0.919463387397059,0.45071417671979,0,1.79389635688862,1.70845911054854,0.211931901159562,0.300091096084402,0.103052529238439,5.66809188100384,0.558350568994769,2.53164498361899,0.487185025805993,1.00973509697646,0.276149695926898,0.323292113637624,1.77504796258307,0,0,0,0,0,0,0,0,0,0,0,3.12899064659632,1.92972281457866,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0.871901815541886,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,1.04007436911366,0.257207374262142,0,0.799266537048298,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.868687840005475,2.26023954805422,3.22309733831812,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,1.00034104211935,0.271265023699736,0,0,0,0.117141414992713,0.300946099727719,0,0,0,1.84369168541703,0.347534457872331,0.587403472388222,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0,1.48418066444991,0.616838775210622,0.887808626565635,0.574890092096664,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.386682873168488,0.924291702687866,0.15350367472613,0.413509717453592,0.966782203814463,1.0151168573996,0.255679882248303,0.356128142586949,0,0,0.127612712494584,0,0,0.94443704049192,0,0,0,0.869932992075073,0,0.429374660225974,0,0.316379424718726,0,0,0,1.27281299170375,0,0.179872457583315,0,0.117812402345686,0.404364963146632,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0.354761064070598,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0,0,0,0,1.39473591775749,0.552567831062295,0,0,0,0.622079175323615,0,0,0,0.0986434056369336,0,5.55684950723184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0.274792780205587,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,1.60515529459758,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,7.8378490021294,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.221858103073705,0,0,0,0,0,0,0,0,0.895528817321244,0,0,1.89403005275089,3.0188148210309,0.889811221596536,1.37304041038154,1.20984739010591,0.15543720058278,1.18284119991707,0,0,0,0,0.265841714557995,1.04349012362347,0,0,0,0.545545977607678,0,0,0,4.80033317595784,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.848662649770126,0,0.619678821295011,0,0,0,0,0,0,0,0,0,0.41023272848151,0,0.138314504928436,0,0,0,0,0,0,3.4324388592045,0,0,0.150420656698515,2.82387096184928,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0.131545547125698,0.118193840883968,0,0,0,0,0,0,0,0.78624198594322,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,1.94284397223656,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0.679708458751268,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0.743990036333503,0.924351257262837,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0,0,0,0.134704106029175,0.143444410785353,0.332660356546013,0,0,0,0,0,0.366724332548599,0,0.665756774185513,0,0 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| ||
|short_description=p12@NRXN2 | |||
}} | }} |
Latest revision as of 03:58, 19 September 2015
Short description: | p12@NRXN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_NRXN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000496291_5end |
EntrezGene: | NRXN2 |
HGNC: | 8009 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 8.84e-16 | 23 |
skeletal muscle myoblast | 4.72e-12 | 4 |
cardiac mesenchymal cell | 3.17e-11 | 4 |
migratory trunk neural crest cell | 3.17e-11 | 4 |
fibroblast | 1.34e-09 | 76 |
hair follicle dermal papilla cell | 7.90e-08 | 3 |
stem cell of epidermis | 7.90e-08 | 3 |
fibroblast of dermis | 1.03e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
integument | 2.17e-15 | 46 |
integumental system | 2.17e-15 | 46 |
skin of body | 5.84e-15 | 41 |
dermis | 1.59e-13 | 9 |
dermatome | 1.59e-13 | 9 |
future dermis | 1.59e-13 | 9 |
dermal papilla | 7.90e-08 | 3 |
papillary layer of dermis | 7.90e-08 | 3 |
connective tissue | 1.38e-07 | 371 |
surface structure | 8.76e-07 | 99 |