FFCP PHASE1:Hg19::chr11:66083010..66083055,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:66083010..66083055,- to FFCP PHASE1:Hg19::chr11:66083010..66083055,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:66083010..66083055,- | |||
|coexpression_cluster_id=C563 | |||
|description=CAGE_peak_at_chr11:66083010..66083055,- | |||
|id=chr11:66083010..66083055,- | |||
|ontology_enrichment_celltype=CL:0000057!3.45e-29!75;CL:0000055!1.49e-27!180;CL:0002620!4.11e-12!23;CL:0000048!3.50e-11!430;CL:0000723!1.26e-10!436;CL:0002334!3.78e-10!12;CL:0000680!3.80e-10!57;CL:0000056!3.80e-10!57;CL:0000355!3.80e-10!57;CL:0000187!5.67e-10!54;CL:0000183!8.30e-10!59;CL:0000034!1.42e-09!444;CL:0000136!1.06e-08!15;CL:0000393!2.32e-08!60;CL:0000211!2.32e-08!60;CL:0002570!2.63e-07!8;CL:0002320!7.30e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0002620;9.45e-16;23!CL:0002334;2.18e-14;12!CL:0000057;1.72e-11;73!CL:0002570;1.48e-08;8!CL:0002320;4.66e-08;188!CL:0002559;3.40e-07;5!CL:0000723;3.83e-07;61!CL:0000136;6.87e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.91e-31,76;CL:0002620,9.90e-16,23;CL:0002334,1.62e-14,12;CL:0000048,1.70e-14,427;CL:0000723,7.80e-14,433;CL:0000034,5.49e-13,441;CL:0002320,8.94e-12,361;CL:0000134,3.41e-09,354;CL:0000136,4.45e-09,15;CL:0002570,1.58e-08,8;CL:0002559,2.84e-07,5;CL:0000680,6.39e-07,58;CL:0000056,6.39e-07,58;CL:0000355,6.39e-07,58;CL:0000187,6.46e-07,55;CL:0000219,9.37e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.91e-07;5!DOID:450;2.91e-07;5!DOID:66;2.91e-07;5!DOID:423;2.91e-07;5!DOID:0080000;2.91e-07;5!DOID:11722;2.91e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.03e-07,5;DOID:450,3.03e-07,5;DOID:66,3.03e-07,5;DOID:423,3.03e-07,5;DOID:0080000,3.03e-07,5;DOID:11722,3.03e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.70e-15!83;UBERON:0002329!1.70e-15!83;UBERON:0003077!1.70e-15!83;UBERON:0003059!1.70e-15!83;UBERON:0007282!1.70e-15!83;UBERON:0009618!1.70e-15!83;UBERON:0007285!1.70e-15!83;UBERON:0004290!1.19e-13!70;UBERON:0002199!3.13e-12!45;UBERON:0002416!3.13e-12!45;UBERON:0003102!8.02e-12!95;UBERON:0000486!1.55e-11!82;UBERON:0002385!2.53e-11!63;UBERON:0001015!2.53e-11!63;UBERON:0000383!2.53e-11!63;UBERON:0001013!5.21e-11!14;UBERON:0001134!8.47e-11!61;UBERON:0002036!8.47e-11!61;UBERON:0003082!8.47e-11!61;UBERON:0004923!2.21e-09!57;UBERON:0002097!2.32e-09!40;UBERON:0000475!1.37e-08!365;UBERON:0005256!1.86e-08!143;UBERON:0002384!1.53e-07!375;UBERON:0004457!9.37e-07!12;UBERON:0000042!9.37e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.71e-14;14!UBERON:0002199;2.19e-12;46!UBERON:0002416;2.19e-12;46!UBERON:0002097;4.26e-11;41!UBERON:0002384;2.53e-10;198!UBERON:0003102;9.29e-10;50!UBERON:0004457;1.42e-09;9!UBERON:0000042;1.42e-09;9!UBERON:0003688;2.21e-08;6!UBERON:0002358;2.21e-08;6!UBERON:0003684;2.21e-08;6!UBERON:0001178;2.21e-08;6!UBERON:0002073;3.40e-07;5!UBERON:0004905;4.04e-07;8!UBERON:0000982;4.04e-07;8!UBERON:0004770;4.04e-07;8!UBERON:0002072;7.52e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,7.23e-19,46;UBERON:0002416,7.23e-19,46;UBERON:0002097,1.87e-14,41;UBERON:0001013,3.97e-14,14;UBERON:0003102,2.75e-13,99;UBERON:0002384,3.91e-12,371;UBERON:0007524,2.47e-10,73;UBERON:0002329,5.77e-10,71;UBERON:0003059,5.77e-10,71;UBERON:0007282,5.77e-10,71;UBERON:0004290,5.77e-10,71;UBERON:0009618,5.77e-10,71;UBERON:0003077,1.06e-09,72;UBERON:0007285,1.06e-09,72;UBERON:0004923,5.64e-09,66;UBERON:0000486,7.29e-09,83;UBERON:0003688,2.12e-08,6;UBERON:0002358,2.12e-08,6;UBERON:0003684,2.12e-08,6;UBERON:0001178,2.12e-08,6;UBERON:0007503,2.88e-08,78;UBERON:0002385,1.09e-07,64;UBERON:0001015,1.09e-07,64;UBERON:0000383,1.09e-07,64;UBERON:0001134,1.73e-07,62;UBERON:0002036,1.73e-07,62;UBERON:0003082,1.73e-07,62;UBERON:0002073,2.84e-07,5;UBERON:0005086,2.84e-07,5;UBERON:0004905,4.21e-07,8;UBERON:0000982,4.21e-07,8;UBERON:0004770,4.21e-07,8;UBERON:0002072,7.36e-07,5 | |||
|phase1_expression=1.81678379270557,9.20632252731228,5.63817616383885,4.00293193412522,4.91657203870017,3.48935409640147,2.53299878168311,2.52687949370732,7.57438321779532,0,0,3.05817920982241,2.63766978228454,2.22779435328084,2.65117900582333,0,0.602694528023977,3.65155045193687,1.46379839637152,0.246242116153576,0.612002073732759,0,0,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0,41.4471672733735,0.670700859703636,0.511450247374121,2.89151321907653,1.00267582127178,1.15877215168659,0,0,0.189069634328136,0.443458794925128,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.44246708221105,0.886413581652058,0.397227542439656,10.8997915884549,3.19201543978521,1.12135520028461,0,0.24666754841716,1.55605517699883,0.404132016209064,0.653847612453835,1.81628913173918,5.18558332031999,1.40592859100278,2.18512053781224,1.1409436430889,2.83952493048422,0.469737994575059,0.161872944368132,0,1.02077085627447,1.10550885580591,2.9964476540972,3.56400857184616,3.70900393917835,0.910161361938026,2.15585442544872,0.336672227908132,0.625592599359821,0.277064115484183,2.19488810440419,2.75839016219118,1.50238058906597,0.340296549480063,11.4809366840872,3.63047560991565,3.60284231971255,7.50227740211006,3.29768093563004,7.72921620136887,3.90845398296339,6.91982962189192,1.94874010322397,6.05841058185875,2.11714766877288,2.26304479546337,15.2654124782144,2.21654616100809,2.7129694769678,0,0,0,0,0,0,0,0,0,1.56449532329816,12.8648187638577,4.14404764057442,6.96551892047969,7.94067429836544,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,5.88034845542168,0,0,0,0,0,0.686271241194102,0,0,0,0,0.325808305310325,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411309970813294,0.300343057843917,0,1.34557301214433,0.43596006883328,1.54010400223995,0.258543431515556,14.3062578340753,2.535908257668,0.531876233169741,4.16029747645464,0.514414748524284,1.41849132023278,1.0656887160644,2.14466990487221,11.3950537132203,1.64648067356154,0.65147236858747,1.77695974371273,0,0,0,0.599837947092342,0,0,0,0,0,0,2.02693829334611,0.205476322550383,0,0,0,0,0,0.508189248444927,0,0,0,0.637938751653163,0,0,0,1.2269149171914,4.00136416847742,1.62759014219841,2.49565033836969,11.9547422494098,7.56971592162886,3.39710103478868,0.300946099727719,6.82222512167955,0,2.65690239414175,0.737476674166813,3.64911180765948,4.11182430671755,3.77457766191941,0,0.215714200818617,0.106727557803444,2.12189300012382,8.32177197552485,4.83824469327489,4.21783273291921,1.2276957863045,4.2099014164961,4.48487022394953,5.11707249066703,3.69964018630297,4.45254199334973,4.1636617326717,4.97172830876756,2.95657761649713,7.78881643775432,4.99704627377825,0,0,0,0.229628896329213,2.91345868810747,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0,3.21367859688319,1.06337790121334,1.69453478826109,1.38153307253517,0.689182862422653,1.82614416276065,3.33538396002726,1.10794615640931,2.40386496246191,0,0,0,0,0.464845549297286,9.75918275174984,0,0,0,0,0,0,1.48863347743867,0.949138274156178,1.90630193923825,1.535386747868,22.6807663657978,0.95460974377781,0,0.359744915166629,2.47083326762449,1.64937363283961,0,0,0.421258456238981,0.975267478179181,0.243713489631284,1.05650146756755,0.818999468447914,2.2624869112594,3.39024349860728,1.10273068709225,0,1.31535265576129,3.47265320560013,1.9676842561399,0,0.30982349809975,0.563391205064483,0.573645408816206,1.17898849215745,0,1.06428319221179,7.59987487071591,22.0627578283134,1.13841952129715,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0.614321404198464,0,0,0,0,0,0.597743964753209,0.828851746593443,0,0,0,4.66559381492711,0,0,0,0.591860433821602,0,1.11136990144637,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.615602068030377,0,0,0,0,0.957003479195758,1.00757352742049,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.775912131907355,0,0.451961481561065,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0.446342914883745,0.0671834724867263,1.44119953416961,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.419636705079985,0,0,0,2.85878130549347,0.662091970365432,0,1.08599920350743,1.72844298240254,2.28611152076586,0,0,0,0.79318464064088,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0.327872630709804,0,0,0.244052529803926,0,0,0,0,0,0,0,0,0,0,0.144921028610825,7.4627401443437,4.44055288709727,7.76728206103659,1.32582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| ||
|short_description=p@chr11:66083010..66083055,- | |||
}} | }} |
Latest revision as of 01:01, 24 July 2015
Short description: | p@chr11:66083010..66083055, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:66083010..66083055, - |
Coexpression cluster: | C563_Mesenchymal_Fibroblast_Adipocyte_tenocyte_Placental_Hair_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.91e-31 | 76 |
skin fibroblast | 9.90e-16 | 23 |
preadipocyte | 1.62e-14 | 12 |
multi fate stem cell | 1.70e-14 | 427 |
somatic stem cell | 7.80e-14 | 433 |
stem cell | 5.49e-13 | 441 |
connective tissue cell | 8.94e-12 | 361 |
mesenchymal cell | 3.41e-09 | 354 |
fat cell | 4.45e-09 | 15 |
mesenchymal stem cell of adipose | 1.58e-08 | 8 |
hair follicle cell | 2.84e-07 | 5 |
muscle precursor cell | 6.39e-07 | 58 |
myoblast | 6.39e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.39e-07 | 58 |
muscle cell | 6.46e-07 | 55 |
motile cell | 9.37e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
integument | 7.23e-19 | 46 |
integumental system | 7.23e-19 | 46 |
skin of body | 1.87e-14 | 41 |
adipose tissue | 3.97e-14 | 14 |
surface structure | 2.75e-13 | 99 |
connective tissue | 3.91e-12 | 371 |
dense mesenchyme tissue | 2.47e-10 | 73 |
somite | 5.77e-10 | 71 |
presomitic mesoderm | 5.77e-10 | 71 |
presumptive segmental plate | 5.77e-10 | 71 |
dermomyotome | 5.77e-10 | 71 |
trunk paraxial mesoderm | 5.77e-10 | 71 |
paraxial mesoderm | 1.06e-09 | 72 |
presumptive paraxial mesoderm | 1.06e-09 | 72 |
organ component layer | 5.64e-09 | 66 |
multilaminar epithelium | 7.29e-09 | 83 |
omentum | 2.12e-08 | 6 |
peritoneum | 2.12e-08 | 6 |
abdominal cavity | 2.12e-08 | 6 |
visceral peritoneum | 2.12e-08 | 6 |
epithelial vesicle | 2.88e-08 | 78 |
muscle tissue | 1.09e-07 | 64 |
musculature | 1.09e-07 | 64 |
musculature of body | 1.09e-07 | 64 |
skeletal muscle tissue | 1.73e-07 | 62 |
striated muscle tissue | 1.73e-07 | 62 |
myotome | 1.73e-07 | 62 |
hair follicle | 2.84e-07 | 5 |
hair follicle placode | 2.84e-07 | 5 |
articulation | 4.21e-07 | 8 |
skeletal joint | 4.21e-07 | 8 |
articular system | 4.21e-07 | 8 |
hypodermis | 7.36e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.03e-07 | 5 |
myotonic disease | 3.03e-07 | 5 |
muscle tissue disease | 3.03e-07 | 5 |
myopathy | 3.03e-07 | 5 |
muscular disease | 3.03e-07 | 5 |
myotonic dystrophy | 3.03e-07 | 5 |