FFCP PHASE1:Hg19::chr11:86519387..86519399,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:86519387..86519399,+ to FFCP PHASE1:Hg19::chr11:86519387..86519399,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:86519387..86519399,+ | |||
|coexpression_cluster_id=C1006 | |||
|description=CAGE_peak_at_chr11:86519387..86519399,+ | |||
|id=chr11:86519387..86519399,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.77e-08!254;CL:0000220!9.80e-08!246;CL:0002321!1.74e-07!248;CL:0000055!6.79e-07!180;CL:0000222!9.25e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000135;3.14e-16;3!CL:0000388;3.14e-16;3!CL:0000136;4.60e-10;13!CL:0000710;6.94e-09;20!CL:0000075;1.15e-08;27!CL:0000197;1.96e-08;6!CL:0000098;1.96e-08;6!CL:0002167;1.96e-08;6!CL:0000346;4.94e-08;3!CL:1000428;4.94e-08;3!CL:0002615;5.78e-08;3!CL:0000064;1.04e-07;3!CL:0000067;1.04e-07;3!CL:0005012;1.04e-07;3!CL:0002304;1.04e-07;3!CL:0002581;5.88e-07;1!CL:0002616;5.88e-07;1!CL:0002379;6.75e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.37e-16,3;CL:0000388,1.37e-16,3;CL:0000710,1.15e-08,20;CL:0000136,1.42e-08,15;CL:0000075,1.70e-08,27;CL:0000197,2.60e-08,6;CL:0000098,2.60e-08,6;CL:0002167,2.60e-08,6;CL:0000346,4.38e-08,3;CL:1000428,4.38e-08,3;CL:0002615,6.21e-08,3;CL:0000064,2.26e-07,3;CL:0000067,2.26e-07,3;CL:0005012,2.26e-07,3;CL:0002304,2.26e-07,3;CL:0002581,5.90e-07,1;CL:0002616,6.23e-07,1;CL:0002379,6.96e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.04e-07;3!DOID:127;1.04e-07;3!DOID:3620;6.75e-07;1!DOID:3565;6.75e-07;1!DOID:3369;8.64e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.87e-08,3;DOID:127,4.87e-08,3;DOID:3620,6.96e-07,1;DOID:3565,6.96e-07,1;DOID:3369,9.15e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;3.14e-16;3!UBERON:0000043;3.14e-16;3!UBERON:0007845;3.14e-16;3!UBERON:0005406;2.99e-12;2!UBERON:0004457;2.24e-09;9!UBERON:0000042;2.24e-09;9!UBERON:0003688;2.34e-08;6!UBERON:0002358;2.34e-08;6!UBERON:0003684;2.34e-08;6!UBERON:0001178;2.34e-08;6!UBERON:0000412;4.94e-08;3!UBERON:0001992;4.94e-08;3!UBERON:0001778;1.04e-07;3!UBERON:0001775;1.04e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.37e-16,3;UBERON:0000043,1.37e-16,3;UBERON:0007845,1.37e-16,3;UBERON:0005406,3.17e-12,2;UBERON:0003688,2.18e-08,6;UBERON:0002358,2.18e-08,6;UBERON:0003684,2.18e-08,6;UBERON:0001178,2.18e-08,6;UBERON:0000412,4.38e-08,3;UBERON:0001992,4.38e-08,3;UBERON:0001778,2.26e-07,3;UBERON:0001775,2.26e-07,3;UBERON:0004457,4.54e-07,12;UBERON:0000042,4.54e-07,12 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0.140954404095971,2.00146596706261,1.34088328328186,4.36169262050184,2.53299878168311,0,0,0,0,0.873765488520689,0.791300934685361,0.123766352960047,0.662794751455832,0.672325146451775,0,0,0,0.246242116153576,0.204000691244253,0,0,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,1.15877215168659,0,0.486634870302636,0.378139268656271,1.10864698731282,1.05401742831751,0,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0,0.419499436209906,1.37559020970034,0.208994966536811,0.516833518338658,0.35576626268671,0,0.402829317109147,0,1.70843440283719,0,1.62028389576352,0,0,0.112611480483322,0,0,0.549605231791222,0,0,0,2.48485975847659,0.12663051166458,0.132409180813219,0.860509862246441,0,1.12135520028461,0,0.49333509683432,0.311211035399766,0.67355336034844,0.490385709340376,0,0,0,0,0,0.149448680551801,0,0,0,0,0.737005903870608,0.103325781175765,0,0.247266929278557,0,0,0,0.375355559615893,0,0,2.75839016219118,0.300476117813194,0.226864366320042,0,0.640672166455702,0,0,0.206105058476878,0,0.744467425326359,0.168776332241266,0,0,0.460249493211497,0,0,0.201504196455281,0,0.193260853163297,0.545492241181669,0,0,0,0,0.10366105501537,0,0,0,3.21620469096443,1.38134921352481,0.464367928031979,0,0.354920400119532,0.168584690078102,0.482022059766964,0.882351781859152,0.217879444092406,0.71181185733329,0.134831308160164,0,0.769494313892781,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0,0.0925884451585296,0,0,2.88662684050547,0.115930404975077,0,0,0.462985512576611,0.190254152234598,0,0.858486162094873,0,0,0,0,0.839910640994298,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.2933531432838,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.199945982364114,0,0,0,0.479249710983165,1.14861935834114,0,0.579125226670317,0.61642896765115,0.179060963239896,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.542530047399471,1.24782516918484,4.46072471992904,1.10391690523754,0.585707074963566,0,2.27407504055985,0,0,0.184369168541703,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0.30239029332968,0.496215615637554,0.460385919864187,0.841980283299221,0.384417447767103,1.53512174720011,0.482561763430822,4.45254199334973,0,0,0,0,0.232420756919918,0.120859449591622,1.20303882181971,0.276242966807689,0,0,0.131124414959424,0,0.15403067420883,0,0,0,1.13733384070897,0.680374821106063,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0.145016693914229,0.0852266274161009,0,0.165284915360978,0.192190067365106,0.127612712494584,0.2023155617111,0,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.571890581771475,0.255897791311334,0,0,0.78494864019923,0,0,0.117812402345686,0,1.58510321173008,0.421258456238981,0,0.731140468893853,0,0,0.141405431953713,0,0,0.66343897524122,0.876901770507525,0,0.655894752046633,0.202910376962704,0.30982349809975,0.563391205064483,0,0,0,0,0.633322905892992,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0.307160702099232,0,0,0,0,0,0.597743964753209,0,0,0.20453736500431,0,0.311039587661807,0.179736702294654,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0.113942055847001,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.843992258112108,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0.063186579628488,0,0,0,0.661983911750998,0,0,0,0,0.520679215005393,0.0979923974143777,0.0870592065804026,0.17472666824203,0.171986032471617,0.483781656445426,0.292357268344742,0.0821154570532092,0.0969890164884194,0,0,0.411125773940253,0.19871461170299,0.0633107959558787,0.586654148204409,0.0801588202515337,0,0.599428828746391,0,0,0,0,0,0.471388069233591,0,0.104602846312333,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0.105600336519406,0.179287339332845,0,0.714695326373367,0,0.25426853765475,1.62899880526114,0,1.95952416065645,0,0,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,3.05845565607623,0,0,0,0,0,0.378806010550178,0,1.77962244319307,0,0.151230923763239,0.15543720058278,0.295710299979268,0.159296767163702,0,0,0.414706207840855,0.53168342911599,0,0,0.380805212168795,0.406870733204662,0,0,0,0,1.20008329398946,0,0.336749488765919,0,0,0,0,0.906823702049089,0.463044948647668,0,0.71635536432595,0.617602894321944,0,0,0.964570191354574,1.18259708457151,0,0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| ||
|short_description=p@chr11:86519387..86519399,+ | |||
}} | }} |
Latest revision as of 03:19, 24 July 2015
Short description: | p@chr11:86519387..86519399, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:86519387..86519399, + |
Coexpression cluster: | C1006_Adipocyte_Olfactory_Preadipocyte_tenocyte_Hair_meningioma_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.37e-16 | 3 |
tendon cell | 1.37e-16 | 3 |
neurecto-epithelial cell | 1.15e-08 | 20 |
fat cell | 1.42e-08 | 15 |
columnar/cuboidal epithelial cell | 1.70e-08 | 27 |
receptor cell | 2.60e-08 | 6 |
sensory epithelial cell | 2.60e-08 | 6 |
olfactory epithelial cell | 2.60e-08 | 6 |
hair follicle dermal papilla cell | 4.38e-08 | 3 |
stem cell of epidermis | 4.38e-08 | 3 |
adipocyte of omentum tissue | 6.21e-08 | 3 |
ciliated cell | 2.26e-07 | 3 |
ciliated epithelial cell | 2.26e-07 | 3 |
multi-ciliated epithelial cell | 2.26e-07 | 3 |
non-pigmented ciliary epithelial cell | 2.26e-07 | 3 |
perirenal preadipocyte | 5.90e-07 | 1 |
perirenal adipocyte cell | 6.23e-07 | 1 |
meningothelial cell | 6.96e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.37e-16 | 3 |
tendon | 1.37e-16 | 3 |
regular connective tissue | 1.37e-16 | 3 |
perirenal fat | 3.17e-12 | 2 |
omentum | 2.18e-08 | 6 |
peritoneum | 2.18e-08 | 6 |
abdominal cavity | 2.18e-08 | 6 |
visceral peritoneum | 2.18e-08 | 6 |
dermal papilla | 4.38e-08 | 3 |
papillary layer of dermis | 4.38e-08 | 3 |
ciliary epithelium | 2.26e-07 | 3 |
ciliary body | 2.26e-07 | 3 |
cavity lining | 4.54e-07 | 12 |
serous membrane | 4.54e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.87e-08 | 3 |
leiomyoma | 4.87e-08 | 3 |
central nervous system cancer | 6.96e-07 | 1 |
meningioma | 6.96e-07 | 1 |
peripheral primitive neuroectodermal tumor | 9.15e-07 | 1 |