FFCP PHASE1:Hg19::chr12:102323662..102323677,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:102323662..102323677,+ to FFCP PHASE1:Hg19::chr12:102323662..102323677,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:102323662..102323677,+ | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr12:102323662..102323677,+ | |||
|id=chr12:102323662..102323677,+ | |||
|ontology_enrichment_celltype=CL:0000945!6.03e-35!24;CL:0000826!6.03e-35!24;CL:0000542!1.70e-19!53;CL:0000051!1.70e-19!53;CL:0000838!8.96e-16!52;CL:0000946!9.36e-15!1;CL:0000786!9.36e-15!1;CL:0000980!9.36e-15!1;CL:0002087!3.51e-12!119;CL:0000738!3.60e-10!140;CL:0002031!1.47e-09!124;CL:0000988!4.46e-09!182;CL:0002032!1.96e-08!165;CL:0000837!1.96e-08!165;CL:0000037!4.89e-08!172;CL:0000566!4.89e-08!172;CL:0000785!5.02e-08!2;CL:0000955!5.02e-08!2;CL:0000818!5.02e-08!2;CL:0000954!5.02e-08!2;CL:0000816!5.02e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.11e-50;24!CL:0000946;7.62e-26;1!CL:0000786;7.62e-26;1!CL:0000542;8.25e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.11e-50,24;CL:0000826,3.11e-50,24;CL:0000946,7.62e-26,1;CL:0000786,7.62e-26,1;CL:0000980,7.62e-26,1;CL:0000838,2.54e-23,52;CL:0000542,6.95e-23,53;CL:0000051,6.95e-23,53;CL:0000785,1.21e-13,2;CL:0000955,1.21e-13,2;CL:0000818,1.21e-13,2;CL:0000954,1.21e-13,2;CL:0000816,1.21e-13,2;CL:0002087,1.73e-10,115;CL:0002031,4.71e-10,120;CL:0000817,1.54e-09,3;CL:0000738,7.15e-09,136;CL:0002032,1.73e-07,161;CL:0000837,1.73e-07,161;CL:0000037,3.59e-07,168;CL:0000988,8.41e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000954;1.21e-13;2!CL:0000051;8.25e-10;53 | |||
|ontology_enrichment_disease=DOID:630!7.13e-15!1;DOID:0050177!7.13e-15!1;DOID:0050427!7.13e-15!1;DOID:2355!1.07e-14!1;DOID:12603!2.11e-14!1;DOID:74!5.37e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:630;4.61e-26;1!DOID:0050177;4.61e-26;1!DOID:0050427;4.61e-26;1!DOID:2355;9.79e-26;1!DOID:74;1.37e-13;2!DOID:0060058;7.67e-11;10!DOID:1287;1.92e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:630,4.61e-26,1;DOID:0050177,4.61e-26,1;DOID:0050427,4.61e-26,1;DOID:2355,9.79e-26,1;DOID:74,1.37e-13,2;DOID:0060058,7.67e-11,10;DOID:1287,1.92e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.62e-18!3;UBERON:0004854!1.62e-18!3;UBERON:0009034!1.62e-18!3;UBERON:0002095!1.62e-18!3;UBERON:0004782!1.62e-18!3;UBERON:0003281!1.62e-18!3;UBERON:0009664!1.62e-18!3;UBERON:0002296!1.62e-18!3;UBERON:0005602!1.62e-18!3;UBERON:0001179!1.62e-18!3;UBERON:0006293!1.62e-18!3;UBERON:0004177!1.95e-17!7;UBERON:0000945!1.60e-07!8;UBERON:0010039!1.60e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.41e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.41e-09,3;UBERON:0004854,1.41e-09,3;UBERON:0009034,1.41e-09,3;UBERON:0002095,1.41e-09,3;UBERON:0004782,1.41e-09,3;UBERON:0003281,1.41e-09,3;UBERON:0009664,1.41e-09,3;UBERON:0002296,1.41e-09,3;UBERON:0005602,1.41e-09,3;UBERON:0001179,1.41e-09,3;UBERON:0006293,1.41e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.4756974428793,31.1982239909794,31.0907586189033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612167784741805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58478091468246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64095327882873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83982747734273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,23.4861716423583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.6837739073489 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.4756974428793,31.1982239909794,31.0907586189033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612167784741805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58478091468246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64095327882873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83982747734273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,23.4861716423583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.6837739073489 | ||
|short_description=p@chr12:102323662..102323677,+ | |||
}} | }} |
Latest revision as of 04:05, 24 July 2015
Short description: | p@chr12:102323662..102323677, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:102323662..102323677, + |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.11e-50 | 24 |
pro-B cell | 3.11e-50 | 24 |
antibody secreting cell | 7.62e-26 | 1 |
plasma cell | 7.62e-26 | 1 |
plasmablast | 7.62e-26 | 1 |
lymphoid lineage restricted progenitor cell | 2.54e-23 | 52 |
lymphocyte | 6.95e-23 | 53 |
common lymphoid progenitor | 6.95e-23 | 53 |
mature B cell | 1.21e-13 | 2 |
pre-B-II cell | 1.21e-13 | 2 |
transitional stage B cell | 1.21e-13 | 2 |
small pre-B-II cell | 1.21e-13 | 2 |
immature B cell | 1.21e-13 | 2 |
nongranular leukocyte | 1.73e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 4.71e-10 | 120 |
precursor B cell | 1.54e-09 | 3 |
leukocyte | 7.15e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.73e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-07 | 161 |
hematopoietic stem cell | 3.59e-07 | 168 |
hematopoietic cell | 8.41e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.41e-09 | 3 |
gastrointestinal system mesentery | 1.41e-09 | 3 |
stomach region | 1.41e-09 | 3 |
mesentery | 1.41e-09 | 3 |
gastrointestinal system serosa | 1.41e-09 | 3 |
mesentery of stomach | 1.41e-09 | 3 |
gut mesentery | 1.41e-09 | 3 |
dorsal mesentery | 1.41e-09 | 3 |
dorsal mesogastrium | 1.41e-09 | 3 |
peritoneal cavity | 1.41e-09 | 3 |
spleen primordium | 1.41e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 4.61e-26 | 1 |
monogenic disease | 4.61e-26 | 1 |
xeroderma pigmentosum | 4.61e-26 | 1 |
anemia | 9.79e-26 | 1 |
hematopoietic system disease | 1.37e-13 | 2 |
lymphoma | 7.67e-11 | 10 |
cardiovascular system disease | 1.92e-07 | 4 |