FFCP PHASE1:Hg19::chr12:113496125..113496146,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=130bp_to_AB384763_5end | |||
|cluster_id=chr12:113496125..113496146,+ | |||
|coexpression_cluster_id=C138 | |||
|description=CAGE_peak_1_at_AB384763_5end | |||
|id=chr12:113496125..113496146,+ | |||
|ontology_enrichment_celltype=CL:0000945!9.22e-24!24;CL:0000826!9.22e-24!24;CL:0000542!6.25e-16!53;CL:0000051!6.25e-16!53;CL:0000838!7.03e-14!52;CL:0000817!6.03e-08!3;CL:0000819!9.91e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.52e-33;24!CL:0000785;2.66e-18;1!CL:0000819;2.66e-18;1!CL:0000542;1.51e-14;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.71e-33,24;CL:0000826,2.71e-33,24;CL:0000542,1.41e-24,53;CL:0000051,1.41e-24,53;CL:0000838,8.65e-20,52;CL:0000819,2.66e-18,1;CL:0000738,2.72e-11,136;CL:0002087,7.14e-11,115;CL:0000785,7.98e-10,2;CL:0000955,7.98e-10,2;CL:0000818,7.98e-10,2;CL:0000954,7.98e-10,2;CL:0000816,7.98e-10,2;CL:0000037,5.49e-09,168;CL:0000988,1.74e-08,177;CL:0002031,3.52e-08,120;CL:0002032,1.46e-07,161;CL:0000837,1.46e-07,161;CL:0000817,5.80e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.12e-17;1!CL:0000051;1.51e-14;53!CL:0000954;7.98e-10;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.21e-18!10;DOID:2531!8.72e-07!51;DOID:0060083!8.72e-07!51;DOID:0060073!9.91e-07!1;DOID:8675!9.91e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.59e-59;10!DOID:0060073;2.66e-18;1!DOID:8675;2.66e-18;1!DOID:12603;4.44e-18;1!DOID:2531;2.47e-11;51!DOID:0060083;2.47e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.24e-59,10;DOID:2531,2.23e-20,51;DOID:0060083,2.23e-20,51;DOID:0060073,2.66e-18,1;DOID:8675,2.66e-18,1;DOID:12603,4.44e-18,1;DOID:0050686,3.69e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002106!8.15e-16!3;UBERON:0004854!8.15e-16!3;UBERON:0009034!8.15e-16!3;UBERON:0002095!8.15e-16!3;UBERON:0004782!8.15e-16!3;UBERON:0003281!8.15e-16!3;UBERON:0009664!8.15e-16!3;UBERON:0002296!8.15e-16!3;UBERON:0005602!8.15e-16!3;UBERON:0001179!8.15e-16!3;UBERON:0006293!8.15e-16!3;UBERON:0003127!1.56e-10!2;UBERON:0002771!3.24e-07!3;UBERON:0004177!4.94e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.12e-17;1!UBERON:0001153;1.12e-17;1!UBERON:0009854;1.12e-17;1!UBERON:0002106;6.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.70e-17,1;UBERON:0001153,1.70e-17,1;UBERON:0001045,1.70e-17,1;UBERON:0002106,6.14e-07,3;UBERON:0004854,6.14e-07,3;UBERON:0009034,6.14e-07,3;UBERON:0002095,6.14e-07,3;UBERON:0004782,6.14e-07,3;UBERON:0003281,6.14e-07,3;UBERON:0009664,6.14e-07,3;UBERON:0002296,6.14e-07,3;UBERON:0005602,6.14e-07,3;UBERON:0001179,6.14e-07,3;UBERON:0006293,6.14e-07,3 | |||
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|short_description=p1@AB384763 | |||
}} | }} |
Latest revision as of 05:10, 24 July 2015
Short description: | p1@AB384763 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB384763_5end |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | 130bp_to_AB384763_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.71e-33 | 24 |
pro-B cell | 2.71e-33 | 24 |
lymphocyte | 1.41e-24 | 53 |
common lymphoid progenitor | 1.41e-24 | 53 |
lymphoid lineage restricted progenitor cell | 8.65e-20 | 52 |
B-1 B cell | 2.66e-18 | 1 |
leukocyte | 2.72e-11 | 136 |
nongranular leukocyte | 7.14e-11 | 115 |
mature B cell | 7.98e-10 | 2 |
pre-B-II cell | 7.98e-10 | 2 |
transitional stage B cell | 7.98e-10 | 2 |
small pre-B-II cell | 7.98e-10 | 2 |
immature B cell | 7.98e-10 | 2 |
hematopoietic stem cell | 5.49e-09 | 168 |
hematopoietic cell | 1.74e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 3.52e-08 | 120 |
hematopoietic oligopotent progenitor cell | 1.46e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.46e-07 | 161 |
precursor B cell | 5.80e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 1.70e-17 | 1 |
caecum | 1.70e-17 | 1 |
midgut | 1.70e-17 | 1 |
spleen | 6.14e-07 | 3 |
gastrointestinal system mesentery | 6.14e-07 | 3 |
stomach region | 6.14e-07 | 3 |
mesentery | 6.14e-07 | 3 |
gastrointestinal system serosa | 6.14e-07 | 3 |
mesentery of stomach | 6.14e-07 | 3 |
gut mesentery | 6.14e-07 | 3 |
dorsal mesentery | 6.14e-07 | 3 |
dorsal mesogastrium | 6.14e-07 | 3 |
peritoneal cavity | 6.14e-07 | 3 |
spleen primordium | 6.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.24e-59 | 10 |
hematologic cancer | 2.23e-20 | 51 |
immune system cancer | 2.23e-20 | 51 |
lymphatic system cancer | 2.66e-18 | 1 |
lymphosarcoma | 2.66e-18 | 1 |
acute leukemia | 4.44e-18 | 1 |
organ system cancer | 3.69e-07 | 137 |