FFCP PHASE1:Hg19::chr12:65996574..65996595,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:65996574..65996595,+ to FFCP PHASE1:Hg19::chr12:65996574..65996595,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-53bp_to_ENST00000539116_5end | |||
|cluster_id=chr12:65996574..65996595,+ | |||
|description=CAGE_peak_2_at_ENST00000539116_5end | |||
|id=chr12:65996574..65996595,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.24e-30!180;CL:0000057!5.21e-19!75;CL:0002371!2.95e-17!591;CL:0000144!1.34e-14!625;CL:0000220!6.90e-14!246;CL:0000183!1.30e-13!59;CL:0002321!1.93e-13!248;CL:0000680!2.05e-13!57;CL:0000056!2.05e-13!57;CL:0000355!2.05e-13!57;CL:0000548!7.06e-13!679;CL:0000004!7.06e-13!679;CL:0000255!7.06e-13!679;CL:0000012!2.15e-12!682;CL:0000187!2.80e-12!54;CL:0000222!4.20e-12!119;CL:0002620!1.64e-11!23;CL:0000192!4.05e-10!42;CL:0000514!4.05e-10!42;CL:0000393!1.66e-09!60;CL:0000211!1.66e-09!60;CL:0000359!5.53e-08!32;CL:0000003!5.94e-08!722;CL:0002077!2.57e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.30e-11;23!CL:0002540;8.11e-10;6!CL:0002092;2.93e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.37e-11,76;CL:0002620,5.03e-11,23;CL:0002540,5.95e-10,6;CL:0002092,3.11e-07,10;CL:0000680,9.73e-07,58;CL:0000056,9.73e-07,58;CL:0000355,9.73e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.32e-19!83;UBERON:0002329!8.32e-19!83;UBERON:0003077!8.32e-19!83;UBERON:0003059!8.32e-19!83;UBERON:0007282!8.32e-19!83;UBERON:0009618!8.32e-19!83;UBERON:0007285!8.32e-19!83;UBERON:0003102!2.12e-17!95;UBERON:0002049!4.45e-15!79;UBERON:0007798!4.45e-15!79;UBERON:0000486!1.63e-14!82;UBERON:0004290!2.91e-13!70;UBERON:0002199!1.84e-12!45;UBERON:0002416!1.84e-12!45;UBERON:0002097!1.86e-12!40;UBERON:0001134!2.04e-11!61;UBERON:0002036!2.04e-11!61;UBERON:0003082!2.04e-11!61;UBERON:0005256!2.85e-11!143;UBERON:0000055!3.70e-11!69;UBERON:0002385!5.71e-11!63;UBERON:0001015!5.71e-11!63;UBERON:0000383!5.71e-11!63;UBERON:0001981!6.54e-11!60;UBERON:0007500!6.54e-11!60;UBERON:0004537!6.54e-11!60;UBERON:0006965!6.54e-11!60;UBERON:0000475!8.30e-11!365;UBERON:0004535!1.16e-09!110;UBERON:0001637!1.68e-09!42;UBERON:0003509!1.68e-09!42;UBERON:0004572!1.68e-09!42;UBERON:0000119!2.99e-09!312;UBERON:0000490!4.68e-09!138;UBERON:0001009!7.49e-09!113;UBERON:0004872!8.52e-09!84;UBERON:0000483!1.64e-08!309;UBERON:0001444!1.69e-08!48;UBERON:0004573!1.69e-08!33;UBERON:0004571!1.69e-08!33;UBERON:0000075!1.61e-07!13;UBERON:0005944!1.61e-07!13;UBERON:0004288!1.61e-07!13;UBERON:0003089!1.61e-07!13;UBERON:0000947!1.72e-07!21;UBERON:0010191!1.72e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001434;4.98e-11;36!UBERON:0000075;1.13e-10;16!UBERON:0004765;1.93e-10;26!UBERON:0002097;9.20e-09;41!UBERON:0002199;3.14e-08;46!UBERON:0002416;3.14e-08;46!UBERON:0002204;9.50e-08;70!UBERON:0001828;9.52e-08;8!UBERON:0002371;1.01e-07;12!UBERON:0011137;4.93e-07;11!UBERON:0010323;4.93e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.71e-13,99;UBERON:0002097,4.14e-12,41;UBERON:0002199,2.98e-11,46;UBERON:0002416,2.98e-11,46;UBERON:0000075,1.70e-10,16;UBERON:0007524,2.69e-08,73;UBERON:0002049,2.96e-08,78;UBERON:0007798,2.96e-08,78;UBERON:0000486,3.67e-08,83;UBERON:0011137,3.76e-08,14;UBERON:0002329,5.49e-08,71;UBERON:0003059,5.49e-08,71;UBERON:0007282,5.49e-08,71;UBERON:0004290,5.49e-08,71;UBERON:0009618,5.49e-08,71;UBERON:0003077,8.72e-08,72;UBERON:0007285,8.72e-08,72;UBERON:0001828,1.29e-07,8;UBERON:0000033,2.06e-07,56;UBERON:0007503,2.12e-07,78;UBERON:0010323,8.42e-07,11 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,1.26343974685366,0,0.245733936501509,0,0,0.527533956456907,3.7129905888014,1.32558950291166,1.34465029290355,0.602694528023977,2.19093027116212,0.487932798790507,0.492484232307152,0.408001382488506,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,1.5905718941022,0,1.51255707462509,1.33037638477538,0.614843499851882,0.0654895377488563,0.728590576585084,1.11235332835329,0,0,0,0,0,0,1.19257444420023,0,1.04142150482278,0.56530794192401,1.67799774483962,0.275118041940067,0.626984899610432,3.35941786920128,2.49036383880697,0.66944122552934,1.20848795132744,0.760272105718513,0.24406205754817,1.47065232138347,0.81014194788176,1.51809538082936,2.02076435363553,0.675668882899933,0,0,1.09921046358244,0,0,0.872188104285069,0,1.13967460498122,4.50191214764944,0.573673241497627,0.709336764396714,0,0,0.98667019366864,0.311211035399766,0.67355336034844,1.63461903113459,0.151357427644931,0,0.468642863667593,1.24864030732128,0.570471821544449,1.19558944441441,1.40921398372518,1.29498355494505,1.82586048712923,5.10385428137233,2.57952066354713,3.82305390350332,1.18800285728205,0.247266929278557,0.910161361938026,0,4.04006673489759,2.37725187756732,7.75779523355712,2.63386572528503,0.919463387397059,0.600952235626387,1.47461838108027,1.4351170855109,0.85422955527427,0.635795703478686,1.80054657650641,1.44273540933814,1.03056216018252,0.37223371266318,1.5189869901714,0.487185025805993,0.504867548488229,0.644349290496095,1.2931684545505,1.06502877754984,1.30977727695932,1.3564847384839,0.966304265816484,2.45471508531751,2.00763216772303,0,0,0,0,0,0,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,1.02940686179115,0.878002283269004,1.1240175325762,1.70899253099772,3.14800713539001,0.325808305310325,0,0,0.231860809950154,0.469634776943287,0.721832238805369,0,0,0,0,0,0,0,0.93733833986777,2.51973192298289,1.13420077793909,0.53735113621709,0.290633938513962,0.766765358330422,0,0,0.207328115540772,0,0,0.888970520090367,1.52795370223311,1.17217447210047,1.71072446022705,1.85089486865982,3.90445975197093,0.857479297891735,2.24262168690721,0.43596006883328,2.3468251462704,0.258543431515556,3.57656445851882,0.845302752556,1.32969058292435,0,2.57207374262142,1.41849132023278,1.0656887160644,0.428933980974443,0,0.823240336780769,0.977208552881205,0.355391948742546,0.791951872933429,0.904318131178758,0.871533458600294,0.499864955910285,0,0,0,1.19812427745791,0,1.42636905040718,0.723906533337896,0.821905290201534,1.43248770591916,0,0,0,0,0,2.60279707715243,0,0,0,0,0,0,0.858840442033979,1.50051156317903,1.35632511849868,0.415941723061614,1.07057393278297,0,0.468565659970853,0.902838299183157,0,0,1.32845119707087,0.184369168541703,3.12781012085098,0.195801157462741,1.02943027143257,0,0,0,0,0,0.30239029332968,0.496215615637554,0.153461973288062,0,0.256278298511402,0.511707249066704,0.482561763430822,0,0.925258162815933,0.887808626565635,1.97105174433142,1.55776328755086,1.51073491997947,0,0.40101294060657,0.184161977871793,0.574072240823034,0.364182336013434,0.262248829918848,0,0.385076685522074,0,0,0.527758144464379,0,1.36074964221213,0.215915916102139,0,0.541892875087706,0.501689773854853,0,0,0.671624264166535,0,0,0.769350375349168,0.656029291399411,0,0,0.27470839445503,0.495056999523528,2.29706215198469,1.30012049207304,0,0.773365746336976,1.84858340537573,0.921022048356777,1.37836572484531,3.33002759091648,1.0151168573996,1.27839941124151,0.178064071293475,0.826424576804891,0.576570202095319,6.89108647470754,0.4046311234222,2.78907329578371,1.5740617341532,0.6970372701606,0.616067160352178,0.532306030317022,0.869932992075073,0.9266210955196,0.143124886741991,3.72158369359667,3.16379424718726,0.762520775695299,0.767693373934002,0,0.636406495851874,0,1.61885211824983,1.37268514868027,1.41374882814824,0.404364963146632,0,0.842516912477962,0.48763373908959,1.21856744815642,0,0.682499557039929,0.848432591722276,0,0.551365343546124,1.32687795048244,2.63070531152258,0,0,0.608731130888112,0,0.563391205064483,1.43411352204052,0.491245205065606,0.7133421029625,3.19284957663538,0,0.658589785919804,3.41525856389144,0.699869440489966,0.673554789078584,0.670302275535787,0,0,0.86101074534246,0,0.886860307073351,1.60806380144872,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78406173895242,0,0,0,0,0,0.293016358543788,0.485442086998054,0,0.284136146806413,0,0,0,0,0,0.667852230137435,0,0,0,0,0,0.20453736500431,0,2.79935628895627,0.539210106883961,0,0,0.0986434056369336,0,2.22273980289274,0,0,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.457987967009312,0,0,0,0,0.225595660617181,0,0.167821586975843,0.1897537327241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| ||
|short_description=p2@ENST00000539116 | |||
}} | }} |
Latest revision as of 11:25, 24 July 2015
Short description: | p2@ENST00000539116 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000539116_5end |
Coexpression cluster: | NA |
Association with transcript: | -53bp_to_ENST00000539116_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.37e-11 | 76 |
skin fibroblast | 5.03e-11 | 23 |
mesenchymal stem cell of the bone marrow | 5.95e-10 | 6 |
bone marrow cell | 3.11e-07 | 10 |
muscle precursor cell | 9.73e-07 | 58 |
myoblast | 9.73e-07 | 58 |
multi-potent skeletal muscle stem cell | 9.73e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.71e-13 | 99 |
skin of body | 4.14e-12 | 41 |
integument | 2.98e-11 | 46 |
integumental system | 2.98e-11 | 46 |
subdivision of skeletal system | 1.70e-10 | 16 |
dense mesenchyme tissue | 2.69e-08 | 73 |
vasculature | 2.96e-08 | 78 |
vascular system | 2.96e-08 | 78 |
multilaminar epithelium | 3.67e-08 | 83 |
axial skeletal system | 3.76e-08 | 14 |
somite | 5.49e-08 | 71 |
presomitic mesoderm | 5.49e-08 | 71 |
presumptive segmental plate | 5.49e-08 | 71 |
dermomyotome | 5.49e-08 | 71 |
trunk paraxial mesoderm | 5.49e-08 | 71 |
paraxial mesoderm | 8.72e-08 | 72 |
presumptive paraxial mesoderm | 8.72e-08 | 72 |
gingiva | 1.29e-07 | 8 |
head | 2.06e-07 | 56 |
epithelial vesicle | 2.12e-07 | 78 |
cranial skeletal system | 8.42e-07 | 11 |