FFCP PHASE1:Hg19::chr12:6876233..6876257,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:6876233..6876257,+ to FFCP PHASE1:Hg19::chr12:6876233..6876257,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:6876233..6876257,+ | |||
|description=CAGE_peak_at_chr12:6876233..6876257,+ | |||
|id=chr12:6876233..6876257,+ | |||
|ontology_enrichment_celltype=CL:0000222!3.40e-14!119;CL:0000055!1.57e-12!180;CL:0000220!2.07e-12!246;CL:0002321!2.70e-12!248;CL:0000192!7.84e-10!42;CL:0000514!7.84e-10!42;CL:0000359!2.00e-09!32;CL:0000115!5.49e-09!35;CL:0000680!1.47e-08!57;CL:0000056!1.47e-08!57;CL:0000355!1.47e-08!57;CL:0000183!1.76e-08!59;CL:0000187!2.98e-08!54;CL:0000213!8.44e-08!57;CL:0000215!8.44e-08!57;CL:0000057!1.01e-07!75;CL:0002139!1.38e-07!24;CL:0002078!4.48e-07!44;CL:0000393!7.79e-07!60;CL:0000211!7.79e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.43e-09;32!CL:0000115;1.06e-08;36!CL:0002139;6.43e-08;24!CL:0000071;2.12e-07;18!CL:0000192;3.91e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.58e-15,121;CL:0000359,3.15e-11,32;CL:0002321,4.88e-11,250;CL:0000115,1.47e-10,36;CL:0000192,1.58e-10,43;CL:0000514,1.58e-10,43;CL:0002078,3.63e-09,45;CL:0000213,1.78e-08,58;CL:0000215,1.78e-08,58;CL:0002139,2.34e-08,24;CL:0000680,3.54e-08,58;CL:0000056,3.54e-08,58;CL:0000355,3.54e-08,58;CL:0000187,9.38e-08,55;CL:0000071,1.24e-07,18;CL:0002546,1.24e-07,18;CL:1000413,4.91e-07,9;CL:0000057,5.60e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002546;2.12e-07;18!CL:0000514;3.91e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.36e-20!69;UBERON:0001981!2.87e-18!60;UBERON:0007500!2.87e-18!60;UBERON:0004537!2.87e-18!60;UBERON:0006965!2.87e-18!60;UBERON:0002049!3.71e-18!79;UBERON:0007798!3.71e-18!79;UBERON:0003914!8.78e-16!118;UBERON:0001637!2.09e-15!42;UBERON:0003509!2.09e-15!42;UBERON:0004572!2.09e-15!42;UBERON:0004872!3.31e-15!84;UBERON:0004573!5.54e-13!33;UBERON:0004571!5.54e-13!33;UBERON:0002100!1.63e-12!216;UBERON:0004111!4.99e-12!241;UBERON:0004535!8.98e-12!110;UBERON:0001009!1.80e-11!113;UBERON:0000490!2.98e-11!138;UBERON:0003104!3.03e-11!238;UBERON:0009142!3.03e-11!238;UBERON:0000481!5.17e-11!347;UBERON:0000477!1.25e-10!286;UBERON:0000475!1.43e-10!365;UBERON:0000468!2.18e-10!659;UBERON:0000119!1.92e-09!312;UBERON:0000483!2.10e-09!309;UBERON:0000947!2.55e-09!21;UBERON:0010191!2.55e-09!21;UBERON:0005256!4.61e-09!143;UBERON:0000025!5.23e-09!194;UBERON:0004290!2.09e-08!70;UBERON:0000480!3.74e-08!626;UBERON:0000467!4.23e-08!625;UBERON:0002385!6.70e-08!63;UBERON:0001015!6.70e-08!63;UBERON:0000383!6.70e-08!63;UBERON:0001134!1.61e-07!61;UBERON:0002036!1.61e-07!61;UBERON:0003082!1.61e-07!61;UBERON:0000926!2.15e-07!448;UBERON:0004120!2.15e-07!448;UBERON:0006603!2.15e-07!448;UBERON:0000914!3.03e-07!83;UBERON:0002329!3.03e-07!83;UBERON:0003077!3.03e-07!83;UBERON:0003059!3.03e-07!83;UBERON:0007282!3.03e-07!83;UBERON:0009618!3.03e-07!83;UBERON:0007285!3.03e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.70e-14;33!UBERON:0004571;1.70e-14;33!UBERON:0001637;1.26e-13;42!UBERON:0003509;1.26e-13;42!UBERON:0004572;1.26e-13;42!UBERON:0007500;3.33e-11;56!UBERON:0001981;3.33e-11;56!UBERON:0004537;3.33e-11;56!UBERON:0000947;3.74e-11;21!UBERON:0010191;3.74e-11;21!UBERON:0000055;3.74e-10;65!UBERON:0003914;1.55e-08;74!UBERON:0002049;5.38e-08;75!UBERON:0007798;5.38e-08;75!UBERON:0004638;2.12e-07;18!UBERON:0001986;2.12e-07;18!UBERON:0004852;2.12e-07;18 | |||
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| ||
|short_description=p@chr12:6876233..6876257,+ | |||
}} | }} |
Latest revision as of 11:42, 24 July 2015
Short description: | p@chr12:6876233..6876257, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:6876233..6876257, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.58e-15 | 121 |
vascular associated smooth muscle cell | 3.15e-11 | 32 |
embryonic cell | 4.88e-11 | 250 |
endothelial cell | 1.47e-10 | 36 |
smooth muscle cell | 1.58e-10 | 43 |
smooth muscle myoblast | 1.58e-10 | 43 |
meso-epithelial cell | 3.63e-09 | 45 |
lining cell | 1.78e-08 | 58 |
barrier cell | 1.78e-08 | 58 |
endothelial cell of vascular tree | 2.34e-08 | 24 |
muscle precursor cell | 3.54e-08 | 58 |
myoblast | 3.54e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.54e-08 | 58 |
muscle cell | 9.38e-08 | 55 |
blood vessel endothelial cell | 1.24e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.24e-07 | 18 |
endothelial cell of artery | 4.91e-07 | 9 |
fibroblast | 5.60e-07 | 76 |