FFCP PHASE1:Hg19::chr14:62162543..62162564,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:62162543..62162564,- to FFCP PHASE1:Hg19::chr14:62162543..62162564,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000557544_5end | |||
|cluster_id=chr14:62162543..62162564,- | |||
|description=CAGE_peak_1_at_ENST00000557544_5end | |||
|id=chr14:62162543..62162564,- | |||
|ontology_enrichment_celltype=CL:0000055!8.98e-12!180;CL:0000680!6.01e-09!57;CL:0000056!6.01e-09!57;CL:0000355!6.01e-09!57;CL:0000187!1.54e-07!54;CL:0000393!3.05e-07!60;CL:0000211!3.05e-07!60;CL:0000183!5.65e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000056;1.35e-08;4!CL:0002579;3.27e-07;3!CL:0000515;3.27e-07;3!CL:0002595;9.84e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.16e-09,58;CL:0000056,3.16e-09,58;CL:0000355,3.16e-09,58;CL:0000515,1.28e-08,4;CL:0000192,1.94e-07,43;CL:0000514,1.94e-07,43;CL:0002579,4.39e-07,3;CL:0002595,7.08e-07,5;CL:0000187,9.72e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000515;1.35e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.16e-08!83;UBERON:0002329!5.16e-08!83;UBERON:0003077!5.16e-08!83;UBERON:0003059!5.16e-08!83;UBERON:0007282!5.16e-08!83;UBERON:0009618!5.16e-08!83;UBERON:0007285!5.16e-08!83;UBERON:0000475!5.94e-08!365;UBERON:0004290!9.50e-08!70;UBERON:0000468!1.55e-07!659;UBERON:0001134!3.26e-07!61;UBERON:0002036!3.26e-07!61;UBERON:0003082!3.26e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.44e-08;6!UBERON:0002358;1.44e-08;6!UBERON:0003684;1.44e-08;6!UBERON:0001178;1.44e-08;6!UBERON:0004457;1.54e-07;9!UBERON:0000042;1.54e-07;9!UBERON:0003834;9.84e-07;5!UBERON:0001533;9.84e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.80e-08,62;UBERON:0002036,2.80e-08,62;UBERON:0003082,2.80e-08,62;UBERON:0002329,3.26e-08,71;UBERON:0003059,3.26e-08,71;UBERON:0007282,3.26e-08,71;UBERON:0004290,3.26e-08,71;UBERON:0009618,3.26e-08,71;UBERON:0003688,3.38e-08,6;UBERON:0002358,3.38e-08,6;UBERON:0003684,3.38e-08,6;UBERON:0001178,3.38e-08,6;UBERON:0003077,5.11e-08,72;UBERON:0007285,5.11e-08,72;UBERON:0002385,7.48e-08,64;UBERON:0001015,7.48e-08,64;UBERON:0000383,7.48e-08,64;UBERON:0007524,7.90e-08,73;UBERON:0000486,1.34e-07,83;UBERON:0007503,5.80e-07,78;UBERON:0003834,7.08e-07,5;UBERON:0001533,7.08e-07,5 | |||
|phase1_expression=1.45342703416445,1.49870366723688,2.25527046553554,1.0007329835313,0.893922188854576,2.61701557230111,2.53299878168311,0.631719873426831,0.783556884599516,0.491467873003018,0,2.18441372130172,1.05506791291381,1.23766352960047,1.32558950291166,0.672325146451775,1.80808358407193,1.46062018077475,0,0,0.204000691244253,0.940364164434263,0,0.136874425072884,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.434021741431704,0.447830948479849,0,0,0.581592955118259,0,0.242584061187816,0.929716147622738,0.411167888021826,0.309706370895104,0,0.512321413058201,1.18241114944293,0.344745680736619,0.645484683583826,0,0.564727018627814,0.272906150057846,0.449446968890169,0.306083892370903,0,0.639337125799041,0,0,0,1.16083695451434,0,0.622822248995575,0.502497330513487,0,0.434377689410233,1.81619850790011,0.736555271975129,0.949387162322653,0,0.212604299965044,0.209658645508376,0.112328631146495,0.450530678524519,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,1.1384259382189,0,0.382273228125229,0,0,0,0,0.786021525498329,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0,7.31420598941885,0,0.255725123687061,0.361439152384566,0,1.15877215168659,0.795285947051099,0.973269740605272,0.283604451492204,0.665188192387692,0.702678285545008,0,0,0,0.97364218096405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,1.53316637465883,0,0.183201743930407,1.31780417436063,0,0,5.4666914686485,0.886413581652058,0.264818361626438,0,0,1.68203280042692,0,0.24666754841716,0,1.61652806483626,1.14423332179421,0.302714855289863,1.15235184896,0.70296429550139,0.624320153660641,0,0.448346041655403,0.117434498643765,0.971237666208789,0.280901613404497,0.204154171254893,0.122834317311768,0.309977343527296,1.18800285728205,0.494533858557114,0,0,0,0.250237039743928,0.277064115484183,0,1.22595118319608,1.35214253015937,0.680593098960126,0.358779271377724,0.640672166455702,0.635795703478686,0.300091096084402,0.412210116953756,0.257640540045629,0,0.337552664482532,0.292311015483596,0,0.552299391853796,0,0,0.503760491138201,0.67824236924195,0,0,0,0.243947412259191,0.530119073285941,0.116193942869518,0.10366105501537,0,0.36497735907583,1.56449532329816,1.28648187638577,0,1.85747171212792,0.721879481669586,0.591534000199219,1.01150814046861,0.723033089650446,0.55146986366197,0.653638332277218,0.71181185733329,1.07865046528132,0.392442930250692,1.53898862778556,0,0,0,0,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0.100528972411631,0,0,1.03993478527958,2.88662684050547,0.34779121492523,0.939269553886573,0.144366447761074,0,0.380508304469197,0,0,0.246217006087397,0.234004265139238,0.297262324577456,0,0,0.141775097242386,0.179117045405697,0,0,0,0.176096868026452,0.207328115540772,0,0,0.063497894292169,0,0,1.71072446022705,0.102827492703324,0,0,0.224262168690721,0.87192013766656,0.1466765716419,0.387815147273333,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,0.266422179016099,1.28680194292333,1.62786481617433,0,0,1.42156779497018,0,1.80863626235752,0.871533458600294,0.099972991182057,0,0,0,1.4377491329495,0,1.42636905040718,3.76431397335706,2.4657158706046,2.14873155887875,0.112085143993527,0,0,0,0.508189248444927,0,0,0,0.637938751653163,0.749007023947182,0,0,0.36807447515742,2.00068208423871,0.813795071099207,3.11956292296211,1.42743191037729,0.788512075169673,0.468565659970853,0.902838299183157,0,2.0694614258501,0.664225598535437,0.921845842708516,0,0,0,0,0.647142602455851,0.106727557803444,1.21251028578504,0,1.81434175997808,3.47350930946288,1.2276957863045,1.40330047216537,3.20347873139252,2.04682899626681,2.2519548960105,0,0.771048469013278,0.532685175939381,0.410635780069046,0.519254429183621,0.929683027679674,0.120859449591622,0.802025881213139,0.276242966807689,0.34444334449382,0.182091168006717,0.131124414959424,0,0.15403067420883,0,2.92278449306521,0,0,0.170093705276516,0.863663664408557,0,0.541892875087706,0.501689773854853,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.290012154876366,0.770243085573222,0.614014698904518,0.551346289938122,0.966782203814463,0.870100163485371,0.511359764496605,0.356128142586949,0.991709492165869,1.92190067365106,0.255225424989168,0.30347334256665,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0.572499546967965,1.48863347743867,0.949138274156178,2.85945290885737,0,1.28381696410176,1.27281299170375,1.56989728039846,1.07923474549989,3.0199073270966,1.53156123049392,0.808729926293264,1.58510321173008,0.842516912477962,0.48763373908959,2.68084838594413,2.11300293513511,0.272999822815972,0.424216295861138,2.26016233240486,1.65409603063837,0,2.19225442626881,0,0.655894752046633,0,0.6196469961995,0,0.286822704408103,0.196498082026242,0.35667105148125,0,1.055538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|short_description=p1@ENST00000557544 | |||
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Latest revision as of 21:44, 24 July 2015
Short description: | p1@ENST00000557544 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000557544_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000557544_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.16e-09 | 58 |
myoblast | 3.16e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.16e-09 | 58 |
skeletal muscle myoblast | 1.28e-08 | 4 |
smooth muscle cell | 1.94e-07 | 43 |
smooth muscle myoblast | 1.94e-07 | 43 |
omentum preadipocyte | 4.39e-07 | 3 |
smooth muscle cell of the subclavian artery | 7.08e-07 | 5 |
muscle cell | 9.72e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.80e-08 | 62 |
striated muscle tissue | 2.80e-08 | 62 |
myotome | 2.80e-08 | 62 |
somite | 3.26e-08 | 71 |
presomitic mesoderm | 3.26e-08 | 71 |
presumptive segmental plate | 3.26e-08 | 71 |
dermomyotome | 3.26e-08 | 71 |
trunk paraxial mesoderm | 3.26e-08 | 71 |
omentum | 3.38e-08 | 6 |
peritoneum | 3.38e-08 | 6 |
abdominal cavity | 3.38e-08 | 6 |
visceral peritoneum | 3.38e-08 | 6 |
paraxial mesoderm | 5.11e-08 | 72 |
presumptive paraxial mesoderm | 5.11e-08 | 72 |
muscle tissue | 7.48e-08 | 64 |
musculature | 7.48e-08 | 64 |
musculature of body | 7.48e-08 | 64 |
dense mesenchyme tissue | 7.90e-08 | 73 |
multilaminar epithelium | 1.34e-07 | 83 |
epithelial vesicle | 5.80e-07 | 78 |
thoracic segment blood vessel | 7.08e-07 | 5 |
subclavian artery | 7.08e-07 | 5 |