FFCP PHASE1:Hg19::chr16:50582222..50582230,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:50582222..50582230,+ to FFCP PHASE1:Hg19::chr16:50582222..50582230,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=85407 | |EntrezGene=85407 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17045 | |HGNC=17045 | ||
|TSSclassifier=strong | |||
|UniProt=Q969G9 | |UniProt=Q969G9 | ||
|association_with_transcript=-10bp_to_ENST00000268459,NM_033119,uc002egg.1_5end | |||
|cluster_id=chr16:50582222..50582230,+ | |||
|coexpression_cluster_id=C127 | |||
|description=CAGE_peak_2_at_NKD1_5end | |||
|id=chr16:50582222..50582230,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.94e-20;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.29e-20,12;CL:0000223,2.18e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.39e-14;11!UBERON:0009497;4.79e-12;13!UBERON:0001041;6.38e-08;30!UBERON:0003104;1.37e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.53e-11;1!DOID:1357;2.53e-11;1!DOID:3119;3.94e-11;14!DOID:3347;9.04e-11;1!DOID:9119;9.04e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.53e-11,1;DOID:1357,2.53e-11,1;DOID:3119,3.95e-11,14;DOID:9119,5.57e-11,1;DOID:3347,9.05e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.57e-09!94;UBERON:0001016!1.57e-09!94;UBERON:0001049!3.16e-09!57;UBERON:0005068!3.16e-09!57;UBERON:0006241!3.16e-09!57;UBERON:0007135!3.16e-09!57;UBERON:0007023!4.86e-09!115;UBERON:0005743!1.92e-08!86;UBERON:0001017!3.21e-08!82;UBERON:0000955!4.54e-08!69;UBERON:0006238!4.54e-08!69;UBERON:0000153!7.30e-08!129;UBERON:0007811!7.30e-08!129;UBERON:0003075!1.47e-07!86;UBERON:0007284!1.47e-07!86;UBERON:0000033!3.23e-07!123;UBERON:0002616!3.39e-07!59;UBERON:0002346!3.89e-07!90;UBERON:0004121!5.12e-07!169;UBERON:0000924!8.75e-07!173;UBERON:0006601!8.75e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.42e-12;19!UBERON:0006925;1.42e-12;19!UBERON:0001764;2.53e-11;1!UBERON:0001825;2.53e-11;1!UBERON:0002426;9.04e-11;1!UBERON:0003831;9.04e-11;1!UBERON:0003898;9.04e-11;1!UBERON:0004830;9.04e-11;1!UBERON:0003830;9.04e-11;1!UBERON:0005175;9.04e-11;1!UBERON:0001774;9.04e-11;1!UBERON:0001103;9.04e-11;1!UBERON:0002423;1.60e-09;25!UBERON:0000945;1.79e-08;5!UBERON:0010039;1.79e-08;5!UBERON:0002365;2.15e-07;31!UBERON:0002330;2.15e-07;31!UBERON:0002368;7.22e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.33e-12,19;UBERON:0006925,1.33e-12,19;UBERON:0008836,1.33e-12,19;UBERON:0001764,2.53e-11,1;UBERON:0001825,2.53e-11,1;UBERON:0002426,6.14e-11,1;UBERON:0003831,6.14e-11,1;UBERON:0003898,6.14e-11,1;UBERON:0004830,6.14e-11,1;UBERON:0003830,6.14e-11,1;UBERON:0005175,6.14e-11,1;UBERON:0001774,6.14e-11,1;UBERON:0001103,6.14e-11,1;UBERON:0010084,6.14e-11,1;UBERON:0008835,7.22e-11,22;UBERON:0003894,7.22e-11,22;UBERON:0009854,2.17e-10,23;UBERON:0007499,1.51e-09,25;UBERON:0009497,1.51e-09,25;UBERON:0000015,1.51e-09,25;UBERON:0002423,1.51e-09,25;UBERON:0006235,1.51e-09,25;UBERON:0004161,1.51e-09,25;UBERON:0009856,3.58e-09,26;UBERON:0002365,1.15e-07,31;UBERON:0002330,1.15e-07,31;UBERON:0002368,9.08e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0,0,0,0,0.157421562627358,0,0,0.154816123316076,0,0.30120591877825,0,0,0.142169232487422,0.293600439334847,0,0,0,0,0,0,0.290796477559129,0.377875943688809,0,0,0,0,0.28769239232215,0,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0.329851300186716,0.398927315243264,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0,0,0.473447805734733,0,0,0,0,0,0,0,0.164437904603676,0,0.289803085735052,0.14828656316206,0.267540828089713,1.04535523804977,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0.612975591598039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,0.590789906681404,0,0.245976877086227,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0.0895585227028483,0.290633938513962,0.766765358330422,0,0.528290604079356,0.414656231081544,0.288239906833923,0.50496973370552,0.190493682876507,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0.215627574859517,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0.232420756919918,0.604297247958111,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0.54941678891006,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0.192444225451024,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,1.1490322207942,0.211673582723883,0,0,0,0,0,0.169291777801603,0.802940375518498,0.605399121573143,0.425846237690326,0.343505344755765,1.22896305723383,0.671028323677248,0.667396566847634,0,0,0,0.270455678475983,1.6653598399891,0,0,0,0.485442086998054,0.111443384277478,0,0,0,0,0,0,0,0,0.211125408127993,0.597743964753209,0,0,0,0.246169610922139,0,0.0898683511473268,0.358042349351218,1.02314474045374,0.295930216910801,0,0,0,0.0927680981618513,0,0,0.962059999958153,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0.552896299656123,1.77328571372128,0.219385397153973,0,0,0.307801034015188,0.341826167541004,0.23056390438806,0,0.108647371922008,0,0,0,0,0.31396051279005,0.332423363800313,0,0,0,0,0,0,0,0.424059214301822,1.29833183845255,0,0,0,0,0.123563938946503,0.313265848516366,0.606610196826093,1.60515529459758,0.234264445725339,0,0,0,0,0,0.61214552326098,0.189559738885464,0.150323419414493,0.311064574191741,0,0.330991955875499,0,0,0,0.693373365065693,0.173559738335131,0.0979923974143777,0,0,0.171986032471617,0,0,0,0.387956065953678,0.176512253383001,0.451961481561065,0,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,1.58499458869517,1.25990255782507,0,0,0,0,0.135904206073614,0.209205692624666,0.407992870545287,0,0.600420288709789,0.136905378891993,0,0,0,0,0.458320848023367,0,0.199679000498991,0,0,0.0671834724867263,0,1.16495949527454,2.44227865152393,1.89556474276683,2.35912403489647,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.242998226632099,0,0.0788057072991982,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0.492555124496034,0.170388021785422,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0.544017803369474,0.2506898940227,0,0,9.10913758251359,0,0,0.250381861413,0.573409195690071,0.221858103073705,0.372578417648301,0.415045904808692,0,0.151649117541648,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0.276516872303462,0.389720617678777,0.132864840313363,0,0,0,0,0,0.106691729694141,0,0,0,0.139879507719444,0,0.639471856518258,0,0.157265941855896,0.436838552768056,0,0,0.123935764259002,0.558644917973244,0.318004350653419,0,0,0,0,0.321146125482298,0,0,0,0,0.138314504928436,0.161475645631851,0,0.687034029507179,0,0,0.231051332300676,0,1.3807198521202,0.397832444232549,0.300841313397029,0,0,0,0,0.147856086217045,0.270150338473579,0,0.413373593002368,0.19024743058172,0,0,0,0,0,0.535701835878287,0.672567444437648,0,0,0,0,0,0.611727596791485,0.263091094251396,0.118193840883968,0,0.235479278551542,0.157115589916002,0.560544326627578,0,0,0,0.285906176706625,0.94808167039636,0,0.347716544605159,0,0,0,0,0.430227358820278,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| 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| ||
|short_description=p2@NKD1 | |||
}} | }} |
Latest revision as of 20:41, 16 September 2015
Short description: | p2@NKD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NKD1_5end |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | -10bp_to_ENST00000268459, NM_033119, uc002egg.1_5end |
EntrezGene: | NKD1 |
HGNC: | 17045 |
UniProt: | Q969G9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.29e-20 | 12 |
endodermal cell | 2.18e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 1.33e-12 | 19 |
digestive gland | 1.33e-12 | 19 |
liver bud | 1.33e-12 | 19 |
maxillary sinus | 2.53e-11 | 1 |
paranasal sinus | 2.53e-11 | 1 |
chest muscle | 6.14e-11 | 1 |
respiratory system muscle | 6.14e-11 | 1 |
skeletal muscle of trunk | 6.14e-11 | 1 |
respiratory system skeletal muscle | 6.14e-11 | 1 |
thoracic segment muscle | 6.14e-11 | 1 |
chest organ | 6.14e-11 | 1 |
muscle of trunk | 6.14e-11 | 1 |
diaphragm | 6.14e-11 | 1 |
future diaphragm | 6.14e-11 | 1 |
hepatic diverticulum | 7.22e-11 | 22 |
liver primordium | 7.22e-11 | 22 |
digestive tract diverticulum | 2.17e-10 | 23 |
epithelial sac | 1.51e-09 | 25 |
epithelium of foregut-midgut junction | 1.51e-09 | 25 |
anatomical boundary | 1.51e-09 | 25 |
hepatobiliary system | 1.51e-09 | 25 |
foregut-midgut junction | 1.51e-09 | 25 |
septum transversum | 1.51e-09 | 25 |
sac | 3.58e-09 | 26 |
exocrine gland | 1.15e-07 | 31 |
exocrine system | 1.15e-07 | 31 |
endocrine gland | 9.08e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.53e-11 | 1 |
maxillary sinus cancer | 2.53e-11 | 1 |
gastrointestinal system cancer | 3.95e-11 | 14 |
acute myeloid leukemia | 5.57e-11 | 1 |
osteosarcoma | 9.05e-11 | 1 |