FFCP PHASE1:Hg19::chr17:39674800..39674821,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3866 | |EntrezGene=3866 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6421 | |HGNC=6421 | ||
|TSSclassifier=strong | |||
|UniProt=B3KRA2 | |UniProt=B3KRA2 | ||
|association_with_transcript=-84bp_to_ENST00000393981_5end | |||
|cluster_id=chr17:39674800..39674821,- | |||
|coexpression_cluster_id=C1777 | |||
|description=CAGE_peak_5_at_KRT15_5end | |||
|id=chr17:39674800..39674821,- | |||
|ontology_enrichment_celltype=CL:0002076!2.47e-19!43;CL:0000223!1.70e-14!59;CL:0002251!2.63e-13!21;CL:0000066!1.09e-10!254;CL:0000240!5.30e-09!6;CL:0000311!5.30e-09!6;CL:0000079!5.30e-09!6;CL:0000237!5.30e-09!6;CL:0000036!5.30e-09!6;CL:0000357!5.30e-09!6;CL:0000114!5.30e-09!6;CL:0000076!3.20e-08!62;CL:0002327!3.57e-08!4;CL:0000575!7.35e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000575;3.60e-18;2!CL:0002231;1.94e-12;3!CL:0002252;4.24e-10;1!CL:0002327;1.03e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,3.16e-18,2;CL:0002231,2.12e-12,3;CL:0002252,5.30e-10,1;CL:0002327,9.85e-10,4;CL:0002076,6.38e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.16e-10;1!UBERON:0000358;4.24e-10;1!UBERON:0004874;8.24e-10;1 | |||
|ontology_enrichment_disease=DOID:1749!4.42e-17!14;DOID:305!1.82e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3151;1.80e-10;1!DOID:3149;1.80e-10;1!DOID:1749;3.28e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.80e-10,1;DOID:3149,1.80e-10,1;DOID:1749,3.93e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000161!7.21e-17!35;UBERON:0000974!8.80e-15!10;UBERON:0000166!1.61e-13!21;UBERON:0003102!4.29e-12!95;UBERON:0000344!5.27e-12!12;UBERON:0000165!9.79e-12!28;UBERON:0000930!9.79e-12!28;UBERON:0003729!7.93e-11!5;UBERON:0001004!1.03e-09!72;UBERON:0001444!1.53e-08!48;UBERON:0001911!3.57e-08!4;UBERON:0005333!3.57e-08!4;UBERON:0008425!3.57e-08!4;UBERON:0005311!3.57e-08!4;UBERON:0003343!4.98e-08!4;UBERON:0004785!4.98e-08!4;UBERON:0001007!6.76e-08!155;UBERON:0001555!6.76e-08!155;UBERON:0007026!6.76e-08!155;UBERON:0001042!8.72e-08!10;UBERON:0009145!8.72e-08!10;UBERON:0000341!1.51e-07!2;UBERON:0004119!1.94e-07!169;UBERON:0000925!1.94e-07!169;UBERON:0006595!1.94e-07!169;UBERON:0006562!4.81e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000974;7.47e-14;6!UBERON:0001043;8.09e-13;3!UBERON:0001723;1.94e-12;3!UBERON:0001033;1.94e-12;3!UBERON:0007029;2.71e-10;1!UBERON:0000997;2.71e-10;1!UBERON:0005056;2.71e-10;1!UBERON:0004176;2.71e-10;1!UBERON:0000014;5.68e-10;4!UBERON:0000989;8.24e-10;1!UBERON:0008811;8.24e-10;1!UBERON:0003343;9.42e-10;4!UBERON:0004785;9.42e-10;4!UBERON:0001911;1.03e-09;4!UBERON:0000964;1.49e-09;4!UBERON:0010409;1.49e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001043,9.38e-13,3;UBERON:0009143,9.38e-13,3;UBERON:0001723,1.33e-12,3;UBERON:0001033,1.33e-12,3;UBERON:0010056,1.33e-12,3;UBERON:0007029,2.37e-10,1;UBERON:0000997,3.10e-10,1;UBERON:0005056,3.10e-10,1;UBERON:0000014,5.31e-10,4;UBERON:0000989,6.33e-10,1;UBERON:0008811,6.33e-10,1;UBERON:0006258,6.33e-10,1;UBERON:0005876,6.33e-10,1;UBERON:0004874,6.33e-10,1;UBERON:0001911,9.85e-10,4;UBERON:0005333,9.85e-10,4;UBERON:0008425,9.85e-10,4;UBERON:0005311,9.85e-10,4;UBERON:0003343,1.12e-09,4;UBERON:0004785,1.12e-09,4;UBERON:0000964,1.39e-09,4;UBERON:0010409,1.39e-09,4;UBERON:0004348,1.39e-09,4;UBERON:0005427,1.39e-09,4;UBERON:0003102,7.13e-09,99;UBERON:0000974,1.77e-08,10;UBERON:0000161,3.18e-08,36 | |||
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| ||
|short_description=p5@KRT15 | |||
}} | }} |
Latest revision as of 05:44, 20 September 2015
Short description: | p5@KRT15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KRT15_5end |
Coexpression cluster: | C1777_keratoacanthoma_esophagus_oral_Mammary_cervical_epidermoid_Corneal |
Association with transcript: | -84bp_to_ENST00000393981_5end |
EntrezGene: | KRT15 |
HGNC: | 6421 |
UniProt: | B3KRA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 3.16e-18 | 2 |
epithelial cell of prostate | 2.12e-12 | 3 |
epithelial cell of esophagus | 5.30e-10 | 1 |
mammary gland epithelial cell | 9.85e-10 | 4 |
endo-epithelial cell | 6.38e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
esophagus | 9.38e-13 | 3 |
esophageal region | 9.38e-13 | 3 |
tongue | 1.33e-12 | 3 |
gustatory system | 1.33e-12 | 3 |
future tongue | 1.33e-12 | 3 |
surface | 2.37e-10 | 1 |
mammalian vulva | 3.10e-10 | 1 |
external female genitalia | 3.10e-10 | 1 |
zone of skin | 5.31e-10 | 4 |
penis | 6.33e-10 | 1 |
intromittent organ | 6.33e-10 | 1 |
lateral plate mesenchyme | 6.33e-10 | 1 |
undifferentiated genital tubercle | 6.33e-10 | 1 |
somatopleure | 6.33e-10 | 1 |
mammary gland | 9.85e-10 | 4 |
mammary bud | 9.85e-10 | 4 |
mammary ridge | 9.85e-10 | 4 |
mammary placode | 9.85e-10 | 4 |
mucosa of oral region | 1.12e-09 | 4 |
respiratory system mucosa | 1.12e-09 | 4 |
cornea | 1.39e-09 | 4 |
eye surface | 1.39e-09 | 4 |
optic eminence | 1.39e-09 | 4 |
corneal primordium | 1.39e-09 | 4 |
surface structure | 7.13e-09 | 99 |
neck | 1.77e-08 | 10 |
orifice | 3.18e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.80e-10 | 1 |
keratoacanthoma | 1.80e-10 | 1 |
squamous cell carcinoma | 3.93e-10 | 14 |